RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 Q96M85 177 aa9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 JSRP1Q96MG2 331 aaPredicted RBP9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 TSSK2Q96PF2 358 aa9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 SPRY4Q9C004 299 aa9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 SLC24A3Q9HC58 644 aa9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 PPP4R1LQ9P1A2 415 aa9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 FRYQ5TBA9 3013 aa9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 FREM3P0C091 2139 aa9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 MED13Q9UHV7 2174 aa9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 MYL12BO14950 172 aa9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 FBXO45P0C2W1 286 aa9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 CCL3P10147 92 aa9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 PIPP12273 146 aaPredicted RBP9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 RPL18Q07020 188 aaKnown RBP9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 FOXF1Q12946 379 aa9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 ZNF791Q3KP31 576 aaPredicted RBP9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 NIPAL3Q6P499 406 aa9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 SECISBP2Q96T21 854 aaKnown RBP9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 CHRNA9Q9UGM1 479 aa9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 IL17BQ9UHF5 180 aa9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 RPH3AQ9Y2J0 694 aaPredicted RBP9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 CHCHD2Q9Y6H1 151 aaPredicted RBP9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 BOD1L1Q8NFC6 3051 aa9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 CEP250Q9BV73 2442 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 TEX13CA0A0J9YWL9 993 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 RIIAD1A6NNX1 92 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 MAGEB4O15481 346 aaPredicted RBP9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 FTH1P19P0C7X4 201 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 PRKCAP17252 672 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 LCN1P31025 176 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 RGS6P49758 472 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 CTXN1P60606 82 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 RPS15P62841 145 aaKnown RBP9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 SPHARQ15513 63 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 SSX1Q16384 188 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 NTRK2Q16620 822 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 ALG10Q5BKT4 473 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 LIPKQ5VXJ0 399 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 SLC6A19Q695T7 634 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 NUP54Q7Z3B4 507 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 RPS19BP1Q86WX3 136 aaKnown RBP9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 TMEM156Q8N614 296 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 NANOGP1Q8N7R0 232 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 ASB15Q8WXK1 588 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 TMEM203Q969S6 136 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 ZMYND19Q96E35 227 aaPredicted RBP9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 OPALINQ96PE5 141 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 TEAD3Q99594 435 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 CHCHD6Q9BRQ6 235 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 LRFN3Q9BTN0 628 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 DDA1Q9BW61 102 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 CCDC86Q9H6F5 360 aaKnown RBP9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 P4HTMQ9NXG6 502 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 LSM2Q9Y333 95 aaKnown RBP9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 GVINP1Q7Z2Y8 2422 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 PRRC2CQ9Y520 2896 aaKnown RBP9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 MRPS14O60783 128 aaKnown RBP9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 DKK1O94907 266 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 ASAH2BP0C7U1 165 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 LIMS3P0CW19 117 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 LIMS4P0CW20 117 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 ZNF3P17036 446 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 HK1P19367 917 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 HTR1FP30939 366 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 TMED10P49755 219 aaKnown RBP9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 POLR2HP52434 150 aaKnown RBP9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 RAB40BQ12829 278 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 EXT1Q16394 746 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 KLHL22Q53GT1 634 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 ATP1A1-AS1Q5TC04 95 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 RPL13AP3Q6NVV1 102 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 MEPCEQ7L2J0 689 aaKnown RBP9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 GRINAQ7Z429 371 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 PIP4P1Q86T03 277 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 RFLNBQ8N5W9 214 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 TMEM99Q8N816 258 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 WDSUB1Q8N9V3 476 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 TM9SF4Q92544 642 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 KISS1RQ969F8 398 aaPredicted RBP9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 GNRHR2Q96P88 292 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 TMEM43Q9BTV4 400 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 CENPOQ9BU64 300 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 PTDSS2Q9BVG9 487 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 ASB6Q9NWX5 421 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 DIMT1Q9UNQ2 313 aaKnown RBP9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 YARS2Q9Y2Z4 477 aaKnown RBP9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 WIF1Q9Y5W5 379 aa9.85□□□□□ -0.83
SNRPA1-211ENST00000560433 URB1O60287 2271 aaKnown RBP9.84□□□□□ -0.83
SNRPA1-211ENST00000560433 OR6C68A6NDL8 312 aa9.84□□□□□ -0.83
SNRPA1-211ENST00000560433 AIREO43918 545 aa9.84□□□□□ -0.83
SNRPA1-211ENST00000560433 EFNA2O43921 213 aa9.84□□□□□ -0.83
SNRPA1-211ENST00000560433 GABARAPO95166 117 aa9.84□□□□□ -0.83
SNRPA1-211ENST00000560433 LALBAP00709 142 aa9.84□□□□□ -0.83
SNRPA1-211ENST00000560433 MYL12AP19105 171 aa9.84□□□□□ -0.83
SNRPA1-211ENST00000560433 PAICSP22234 425 aaKnown RBP9.84□□□□□ -0.83
SNRPA1-211ENST00000560433 CDKN2AP42771 156 aaKnown RBP9.84□□□□□ -0.83
SNRPA1-211ENST00000560433 RPS4XP62701 263 aaKnown RBP9.84□□□□□ -0.83
SNRPA1-211ENST00000560433 DNASE1L3Q13609 305 aa9.84□□□□□ -0.83
SNRPA1-211ENST00000560433 ATP1A4Q13733 1029 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms