RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 LOXP28300 417 aaPredicted RBP13.12□□□□□ -0.31
RABGGTA-211ENST00000559850 MAP2K6P52564 334 aa13.12□□□□□ -0.31
RABGGTA-211ENST00000559850 SLC16A1P53985 500 aa13.12□□□□□ -0.31
RABGGTA-211ENST00000559850 GNGT1P63211 74 aa13.12□□□□□ -0.31
RABGGTA-211ENST00000559850 SLC17A1Q14916 467 aa13.12□□□□□ -0.31
RABGGTA-211ENST00000559850 PDK3Q15120 406 aa13.12□□□□□ -0.31
RABGGTA-211ENST00000559850 C6orf89Q6UWU4 347 aa13.12□□□□□ -0.31
RABGGTA-211ENST00000559850 CASP12Q6UXS9 341 aa13.12□□□□□ -0.31
RABGGTA-211ENST00000559850 PATL1Q86TB9 770 aaKnown RBP13.12□□□□□ -0.31
RABGGTA-211ENST00000559850 TSPYL5Q86VY4 417 aaPredicted RBP13.12□□□□□ -0.31
RABGGTA-211ENST00000559850 LSMEM1Q8N8F7 131 aa13.12□□□□□ -0.31
RABGGTA-211ENST00000559850 PCYOX1LQ8NBM8 494 aa13.12□□□□□ -0.31
RABGGTA-211ENST00000559850 OR6T1Q8NGN1 323 aa13.12□□□□□ -0.31
RABGGTA-211ENST00000559850 SLC26A7Q8TE54 656 aa13.12□□□□□ -0.31
RABGGTA-211ENST00000559850 KISS1RQ969F8 398 aaPredicted RBP13.12□□□□□ -0.31
RABGGTA-211ENST00000559850 APH1AQ96BI3 265 aa13.12□□□□□ -0.31
RABGGTA-211ENST00000559850 ZNF583Q96ND8 569 aa13.12□□□□□ -0.31
RABGGTA-211ENST00000559850 MCHR1Q99705 422 aa13.12□□□□□ -0.31
RABGGTA-211ENST00000559850 TRIM2Q9C040 744 aa13.12□□□□□ -0.31
RABGGTA-211ENST00000559850 TMEM27Q9HBJ8 222 aa13.12□□□□□ -0.31
RABGGTA-211ENST00000559850 CCM2LQ9NUG4 571 aaPredicted RBP13.12□□□□□ -0.31
RABGGTA-211ENST00000559850 MRGBPQ9NV56 204 aa13.12□□□□□ -0.31
RABGGTA-211ENST00000559850 GID8Q9NWU2 228 aa13.12□□□□□ -0.31
RABGGTA-211ENST00000559850 ST6GALNAC2Q9UJ37 374 aa13.12□□□□□ -0.31
RABGGTA-211ENST00000559850 RAI1Q7Z5J4 1906 aaPredicted RBP13.11□□□□□ -0.31
RABGGTA-211ENST00000559850 MYO9AB2RTY4 2548 aa13.11□□□□□ -0.31
RABGGTA-211ENST00000559850 AKAP6Q13023 2319 aa13.11□□□□□ -0.31
RABGGTA-211ENST00000559850 A0A0B4J2E0 115 aa13.11□□□□□ -0.31
RABGGTA-211ENST00000559850 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.11□□□□□ -0.31
RABGGTA-211ENST00000559850 A0A1B0GX12 115 aa13.11□□□□□ -0.31
RABGGTA-211ENST00000559850 ENO4A6NNW6 628 aa13.11□□□□□ -0.31
RABGGTA-211ENST00000559850 FTCDNL1E5RQL4 147 aa13.11□□□□□ -0.31
RABGGTA-211ENST00000559850 SLC22A2O15244 555 aa13.11□□□□□ -0.31
RABGGTA-211ENST00000559850 KLF4O43474 513 aa13.11□□□□□ -0.31
RABGGTA-211ENST00000559850 SHOX2O60902 331 aaPredicted RBP13.11□□□□□ -0.31
RABGGTA-211ENST00000559850 MRPL33O75394 65 aaKnown RBP13.11□□□□□ -0.31
RABGGTA-211ENST00000559850 PLAUP00749 431 aa13.11□□□□□ -0.31
RABGGTA-211ENST00000559850 P2RY4P51582 365 aa13.11□□□□□ -0.31
RABGGTA-211ENST00000559850 CDH12P55289 794 aa13.11□□□□□ -0.31
RABGGTA-211ENST00000559850 FAPQ12884 760 aa13.11□□□□□ -0.31
RABGGTA-211ENST00000559850 STK11Q15831 433 aa13.11□□□□□ -0.31
RABGGTA-211ENST00000559850 NRF1Q16656 503 aa13.11□□□□□ -0.31
RABGGTA-211ENST00000559850 C9orf135Q5VTT2 229 aa13.11□□□□□ -0.31
RABGGTA-211ENST00000559850 Q6ZT83 130 aa13.11□□□□□ -0.31
RABGGTA-211ENST00000559850 BHLHA15Q7RTS1 189 aaPredicted RBP13.11□□□□□ -0.31
RABGGTA-211ENST00000559850 RANBP3LQ86VV4 465 aaPredicted RBP13.11□□□□□ -0.31
RABGGTA-211ENST00000559850 SLC30A8Q8IWU4 369 aa13.11□□□□□ -0.31
RABGGTA-211ENST00000559850 ZIC4Q8N9L1 334 aa13.11□□□□□ -0.31
RABGGTA-211ENST00000559850 STEAP2Q8NFT2 490 aa13.11□□□□□ -0.31
RABGGTA-211ENST00000559850 OR9K2Q8NGE7 335 aa13.11□□□□□ -0.31
RABGGTA-211ENST00000559850 RP9Q8TA86 221 aaKnown RBP13.11□□□□□ -0.31
RABGGTA-211ENST00000559850 STK35Q8TDR2 534 aa13.11□□□□□ -0.31
RABGGTA-211ENST00000559850 TAAR8Q969N4 342 aa13.11□□□□□ -0.31
RABGGTA-211ENST00000559850 ZNF385AQ96PM9 386 aaKnown RBP13.11□□□□□ -0.31
RABGGTA-211ENST00000559850 SH3GL1Q99961 368 aa13.11□□□□□ -0.31
RABGGTA-211ENST00000559850 FANCFQ9NPI8 374 aa13.11□□□□□ -0.31
RABGGTA-211ENST00000559850 CMTM6Q9NX76 183 aa13.11□□□□□ -0.31
RABGGTA-211ENST00000559850 AKAP9Q99996 3911 aa13.11□□□□□ -0.31
RABGGTA-211ENST00000559850 GMNCA6NCL1 334 aa13.1□□□□□ -0.31
RABGGTA-211ENST00000559850 FAM220BPB1ANY3 271 aa13.1□□□□□ -0.31
RABGGTA-211ENST00000559850 LRRN3E7EW58 273 aa13.1□□□□□ -0.31
RABGGTA-211ENST00000559850 GPR171O14626 319 aa13.1□□□□□ -0.31
RABGGTA-211ENST00000559850 RAD51DO75771 328 aa13.1□□□□□ -0.31
RABGGTA-211ENST00000559850 NPPAP01160 153 aa13.1□□□□□ -0.31
RABGGTA-211ENST00000559850 THY1P04216 161 aa13.1□□□□□ -0.31
RABGGTA-211ENST00000559850 PNMTP11086 282 aa13.1□□□□□ -0.31
RABGGTA-211ENST00000559850 PPP3CBP16298 524 aa13.1□□□□□ -0.31
RABGGTA-211ENST00000559850 ART1P52961 327 aa13.1□□□□□ -0.31
RABGGTA-211ENST00000559850 LGALS3BPQ08380 585 aa13.1□□□□□ -0.31
RABGGTA-211ENST00000559850 ITGADQ13349 1161 aa13.1□□□□□ -0.31
RABGGTA-211ENST00000559850 P2RY6Q15077 328 aa13.1□□□□□ -0.31
RABGGTA-211ENST00000559850 TAB1Q15750 504 aa13.1□□□□□ -0.31
RABGGTA-211ENST00000559850 ENTPD8Q5MY95 495 aa13.1□□□□□ -0.31
RABGGTA-211ENST00000559850 INTS11Q5TA45 600 aaKnown RBP13.1□□□□□ -0.31
RABGGTA-211ENST00000559850 FBXW9Q5XUX1 488 aa13.1□□□□□ -0.31
RABGGTA-211ENST00000559850 TMEM225Q6GV28 225 aa13.1□□□□□ -0.31
RABGGTA-211ENST00000559850 ULK3Q6PHR2 472 aa13.1□□□□□ -0.31
RABGGTA-211ENST00000559850 PAMR1Q6UXH9 720 aa13.1□□□□□ -0.31
RABGGTA-211ENST00000559850 CCDC80Q76M96 950 aa13.1□□□□□ -0.31
RABGGTA-211ENST00000559850 CPLX4Q7Z7G2 160 aa13.1□□□□□ -0.31
RABGGTA-211ENST00000559850 BHLHE22Q8NFJ8 381 aaPredicted RBP13.1□□□□□ -0.31
RABGGTA-211ENST00000559850 MFSD8Q8NHS3 518 aa13.1□□□□□ -0.31
RABGGTA-211ENST00000559850 DNAJA4Q8WW22 397 aaPredicted RBP13.1□□□□□ -0.31
RABGGTA-211ENST00000559850 SLC47A1Q96FL8 570 aa13.1□□□□□ -0.31
RABGGTA-211ENST00000559850 PLPPR2Q96GM1 343 aa13.1□□□□□ -0.31
RABGGTA-211ENST00000559850 MYLK2Q9H1R3 596 aa13.1□□□□□ -0.31
RABGGTA-211ENST00000559850 UBTD1Q9HAC8 227 aa13.1□□□□□ -0.31
RABGGTA-211ENST00000559850 SELENONQ9NZV5 590 aa13.1□□□□□ -0.31
RABGGTA-211ENST00000559850 SLC9A8Q9Y2E8 581 aa13.1□□□□□ -0.31
RABGGTA-211ENST00000559850 ABCA4P78363 2273 aa13.1□□□□□ -0.31
RABGGTA-211ENST00000559850 SPG11Q96JI7 2443 aa13.1□□□□□ -0.31
RABGGTA-211ENST00000559850 A0A1W2PR80 420 aa13.09□□□□□ -0.31
RABGGTA-211ENST00000559850 M0R082 166 aa13.09□□□□□ -0.31
RABGGTA-211ENST00000559850 SNX3O60493 162 aa13.09□□□□□ -0.31
RABGGTA-211ENST00000559850 ATE1O95260 518 aa13.09□□□□□ -0.31
RABGGTA-211ENST00000559850 GTF2E2P29084 291 aaKnown RBP13.09□□□□□ -0.31
RABGGTA-211ENST00000559850 GRPRP30550 384 aa13.09□□□□□ -0.31
RABGGTA-211ENST00000559850 NUDT2P50583 147 aa13.09□□□□□ -0.31
RABGGTA-211ENST00000559850 LTBQ06643 244 aa13.09□□□□□ -0.31
RABGGTA-211ENST00000559850 FOXD4Q12950 439 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms