RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 MT-ND1P03886 318 aa19.36■□□□□ 0.69
SNX1-206ENST00000559389 RNF224P0DH78 156 aa19.36■□□□□ 0.69
SNX1-206ENST00000559389 TMIGD3P0DMS9 266 aaPredicted RBP19.36■□□□□ 0.69
SNX1-206ENST00000559389 UMPSP11172 480 aa19.36■□□□□ 0.69
SNX1-206ENST00000559389 SMSP52788 366 aa19.36■□□□□ 0.69
SNX1-206ENST00000559389 DGCR6Q14129 220 aa19.36■□□□□ 0.69
SNX1-206ENST00000559389 GUSBP1Q15486 140 aa19.36■□□□□ 0.69
SNX1-206ENST00000559389 HSPB2Q16082 182 aa19.36■□□□□ 0.69
SNX1-206ENST00000559389 PAQR6Q6TCH4 344 aa19.36■□□□□ 0.69
SNX1-206ENST00000559389 CANT1Q8WVQ1 401 aa19.36■□□□□ 0.69
SNX1-206ENST00000559389 HS6ST2Q96MM7 605 aa19.36■□□□□ 0.69
SNX1-206ENST00000559389 ZNF347Q96SE7 839 aa19.36■□□□□ 0.69
SNX1-206ENST00000559389 MEPEQ9NQ76 525 aaPredicted RBP19.36■□□□□ 0.69
SNX1-206ENST00000559389 UBR5O95071 2799 aaPredicted RBP19.35■□□□□ 0.69
SNX1-206ENST00000559389 WIPF3A6NGB9 483 aa19.35■□□□□ 0.69
SNX1-206ENST00000559389 CYTIPO60759 359 aa19.35■□□□□ 0.69
SNX1-206ENST00000559389 RAP2AP10114 183 aa19.35■□□□□ 0.69
SNX1-206ENST00000559389 HOXB6P17509 224 aaKnown RBP19.35■□□□□ 0.69
SNX1-206ENST00000559389 SPIBQ01892 262 aa19.35■□□□□ 0.69
SNX1-206ENST00000559389 RNPS1Q15287 305 aaKnown RBP19.35■□□□□ 0.69
SNX1-206ENST00000559389 ZSCAN26Q16670 478 aa19.35■□□□□ 0.69
SNX1-206ENST00000559389 CCDC71Q8IV32 467 aaPredicted RBP19.35■□□□□ 0.69
SNX1-206ENST00000559389 SLC43A2Q8N370 569 aa19.35■□□□□ 0.69
SNX1-206ENST00000559389 PFN4Q8NHR9 129 aa19.35■□□□□ 0.69
SNX1-206ENST00000559389 PIGXQ8TBF5 258 aa19.35■□□□□ 0.69
SNX1-206ENST00000559389 ITLN2Q8WWU7 325 aaPredicted RBP19.35■□□□□ 0.69
SNX1-206ENST00000559389 INTS12Q96CB8 462 aaKnown RBP19.35■□□□□ 0.69
SNX1-206ENST00000559389 COQ3Q9NZJ6 369 aa19.35■□□□□ 0.69
SNX1-206ENST00000559389 AURKCQ9UQB9 309 aa19.35■□□□□ 0.69
SNX1-206ENST00000559389 MED31Q9Y3C7 131 aa19.35■□□□□ 0.69
SNX1-206ENST00000559389 TESMINQ9Y4I5 508 aa19.35■□□□□ 0.69
SNX1-206ENST00000559389 RP1L1Q8IWN7 2480 aaPredicted RBP19.34■□□□□ 0.69
SNX1-206ENST00000559389 AQP7P3A6NL99 342 aa19.34■□□□□ 0.69
SNX1-206ENST00000559389 ENO4A6NNW6 628 aa19.34■□□□□ 0.69
SNX1-206ENST00000559389 RAMP1O60894 148 aa19.34■□□□□ 0.69
SNX1-206ENST00000559389 SS18L1O75177 396 aaPredicted RBP19.34■□□□□ 0.69
SNX1-206ENST00000559389 AKR7A3O95154 331 aa19.34■□□□□ 0.69
SNX1-206ENST00000559389 MT-ATP6P00846 226 aa19.34■□□□□ 0.69
SNX1-206ENST00000559389 IGF2P01344 180 aa19.34■□□□□ 0.69
SNX1-206ENST00000559389 CRHP06850 196 aa19.34■□□□□ 0.69
SNX1-206ENST00000559389 GTF2E2P29084 291 aaKnown RBP19.34■□□□□ 0.69
SNX1-206ENST00000559389 CHRNB4P30926 498 aa19.34■□□□□ 0.69
SNX1-206ENST00000559389 ERFP50548 548 aa19.34■□□□□ 0.69
SNX1-206ENST00000559389 LTBQ06643 244 aa19.34■□□□□ 0.69
SNX1-206ENST00000559389 FOXF2Q12947 444 aa19.34■□□□□ 0.69
SNX1-206ENST00000559389 FOXD4Q12950 439 aaPredicted RBP19.34■□□□□ 0.69
SNX1-206ENST00000559389 CCNIQ14094 377 aa19.34■□□□□ 0.69
SNX1-206ENST00000559389 MFSD13AQ14CX5 517 aa19.34■□□□□ 0.69
SNX1-206ENST00000559389 ZNF74Q16587 644 aa19.34■□□□□ 0.69
SNX1-206ENST00000559389 OTUD3Q5T2D3 398 aaPredicted RBP19.34■□□□□ 0.69
SNX1-206ENST00000559389 ACOT11Q8WXI4 607 aaPredicted RBP19.34■□□□□ 0.69
SNX1-206ENST00000559389 SDCCAG3Q96C92 435 aa19.34■□□□□ 0.69
SNX1-206ENST00000559389 SLC25A36Q96CQ1 311 aa19.34■□□□□ 0.69
SNX1-206ENST00000559389 GMPPAQ96IJ6 420 aaPredicted RBP19.34■□□□□ 0.69
SNX1-206ENST00000559389 MOGAT1Q96PD6 335 aa19.34■□□□□ 0.69
SNX1-206ENST00000559389 PSD2Q9BQI7 771 aa19.34■□□□□ 0.69
SNX1-206ENST00000559389 NAA11Q9BSU3 229 aaPredicted RBP19.34■□□□□ 0.69
SNX1-206ENST00000559389 FUZQ9BT04 418 aa19.34■□□□□ 0.69
SNX1-206ENST00000559389 SFXN3Q9BWM7 321 aa19.34■□□□□ 0.69
SNX1-206ENST00000559389 KLHL4Q9C0H6 718 aa19.34■□□□□ 0.69
SNX1-206ENST00000559389 GP6Q9HCN6 339 aa19.34■□□□□ 0.69
SNX1-206ENST00000559389 GLRX2Q9NS18 164 aa19.34■□□□□ 0.69
SNX1-206ENST00000559389 KLHL9Q9P2J3 617 aa19.34■□□□□ 0.69
SNX1-206ENST00000559389 KLHL13Q9P2N7 655 aa19.34■□□□□ 0.69
SNX1-206ENST00000559389 ING1Q9UK53 422 aaPredicted RBP19.34■□□□□ 0.69
SNX1-206ENST00000559389 CORINQ9Y5Q5 1042 aa19.34■□□□□ 0.69
SNX1-206ENST00000559389 A0A087WUU8 490 aa19.33■□□□□ 0.68
SNX1-206ENST00000559389 A0A1W2PNV4 684 aa19.33■□□□□ 0.68
SNX1-206ENST00000559389 LRRN3E7EW58 273 aa19.33■□□□□ 0.68
SNX1-206ENST00000559389 PIP5K1CO60331 668 aa19.33■□□□□ 0.68
SNX1-206ENST00000559389 TNFSF13O75888 250 aa19.33■□□□□ 0.68
SNX1-206ENST00000559389 IL18BPO95998 194 aa19.33■□□□□ 0.68
SNX1-206ENST00000559389 AGAP20933 346 aa19.33■□□□□ 0.68
SNX1-206ENST00000559389 CTSSP25774 331 aa19.33■□□□□ 0.68
SNX1-206ENST00000559389 GRPRP30550 384 aa19.33■□□□□ 0.68
SNX1-206ENST00000559389 RRM2P31350 389 aa19.33■□□□□ 0.68
SNX1-206ENST00000559389 P2RY4P51582 365 aa19.33■□□□□ 0.68
SNX1-206ENST00000559389 SMIM11AP58511 58 aa19.33■□□□□ 0.68
SNX1-206ENST00000559389 LSM11P83369 360 aaKnown RBP eCLIP19.33■□□□□ 0.68
SNX1-206ENST00000559389 FGD3Q5JSP0 725 aa19.33■□□□□ 0.68
SNX1-206ENST00000559389 SLC46A3Q7Z3Q1 461 aa19.33■□□□□ 0.68
SNX1-206ENST00000559389 MRGPRGQ86SM5 289 aa19.33■□□□□ 0.68
SNX1-206ENST00000559389 MCEMP1Q8IX19 187 aa19.33■□□□□ 0.68
SNX1-206ENST00000559389 ZNF808Q8N4W9 903 aaPredicted RBP19.33■□□□□ 0.68
SNX1-206ENST00000559389 TMEM99Q8N816 258 aa19.33■□□□□ 0.68
SNX1-206ENST00000559389 SLC7A13Q8TCU3 470 aa19.33■□□□□ 0.68
SNX1-206ENST00000559389 SSC4DQ8WTU2 575 aa19.33■□□□□ 0.68
SNX1-206ENST00000559389 ASB5Q8WWX0 329 aa19.33■□□□□ 0.68
SNX1-206ENST00000559389 RSRC1Q96IZ7 334 aaKnown RBP19.33■□□□□ 0.68
SNX1-206ENST00000559389 CHID1Q9BWS9 393 aa19.33■□□□□ 0.68
SNX1-206ENST00000559389 FKRPQ9H9S5 495 aa19.33■□□□□ 0.68
SNX1-206ENST00000559389 C20orf141Q9NUB4 165 aa19.33■□□□□ 0.68
SNX1-206ENST00000559389 CLEC4AQ9UMR7 237 aa19.33■□□□□ 0.68
SNX1-206ENST00000559389 IGKV3D-15A0A087WSY6 115 aa19.32■□□□□ 0.68
SNX1-206ENST00000559389 TRBV4-1A0A0J9YWV2 114 aa19.32■□□□□ 0.68
SNX1-206ENST00000559389 ZNF716A6NP11 495 aa19.32■□□□□ 0.68
SNX1-206ENST00000559389 M0R082 166 aa19.32■□□□□ 0.68
SNX1-206ENST00000559389 GADD45GO95257 159 aa19.32■□□□□ 0.68
SNX1-206ENST00000559389 PLGP00747 810 aaPredicted RBP19.32■□□□□ 0.68
SNX1-206ENST00000559389 AGTR1P30556 359 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms