RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 KCNE5Q9UJ90 142 aa14.98□□□□□ -0.01
SHMT2-232ENST00000557487 CA5BQ9Y2D0 317 aa14.98□□□□□ -0.01
SHMT2-232ENST00000557487 V9GY05 133 aa14.98□□□□□ -0.01
SHMT2-232ENST00000557487 NUMA1Q14980 2115 aa14.97□□□□□ -0.01
SHMT2-232ENST00000557487 A0A1B0GWA3 101 aa14.97□□□□□ -0.01
SHMT2-232ENST00000557487 HMSDA8MTL9 139 aa14.97□□□□□ -0.01
SHMT2-232ENST00000557487 PEX12O00623 359 aa14.97□□□□□ -0.01
SHMT2-232ENST00000557487 CTRB1P17538 263 aa14.97□□□□□ -0.01
SHMT2-232ENST00000557487 C5AR1P21730 350 aa14.97□□□□□ -0.01
SHMT2-232ENST00000557487 NFYAP23511 347 aaPredicted RBP14.97□□□□□ -0.01
SHMT2-232ENST00000557487 MAPK3P27361 379 aaPredicted RBP14.97□□□□□ -0.01
SHMT2-232ENST00000557487 CST6Q15828 149 aa14.97□□□□□ -0.01
SHMT2-232ENST00000557487 TRMT12Q53H54 448 aaKnown RBP14.97□□□□□ -0.01
SHMT2-232ENST00000557487 FCRLBQ6BAA4 426 aa14.97□□□□□ -0.01
SHMT2-232ENST00000557487 CTRB2Q6GPI1 263 aa14.97□□□□□ -0.01
SHMT2-232ENST00000557487 ESPNLQ6ZVH7 1005 aa14.97□□□□□ -0.01
SHMT2-232ENST00000557487 ABHD13Q7L211 337 aa14.97□□□□□ -0.01
SHMT2-232ENST00000557487 KCTD20Q7Z5Y7 419 aa14.97□□□□□ -0.01
SHMT2-232ENST00000557487 NAXDQ8IW45 347 aa14.97□□□□□ -0.01
SHMT2-232ENST00000557487 LCN9Q8WX39 176 aa14.97□□□□□ -0.01
SHMT2-232ENST00000557487 HAVCR1Q96D42 359 aa14.97□□□□□ -0.01
SHMT2-232ENST00000557487 MRPL38Q96DV4 380 aaKnown RBP14.97□□□□□ -0.01
SHMT2-232ENST00000557487 RSPRY1Q96DX4 576 aa14.97□□□□□ -0.01
SHMT2-232ENST00000557487 ZMYND19Q96E35 227 aaPredicted RBP14.97□□□□□ -0.01
SHMT2-232ENST00000557487 SFXN2Q96NB2 322 aa14.97□□□□□ -0.01
SHMT2-232ENST00000557487 AIFM2Q9BRQ8 373 aa14.97□□□□□ -0.01
SHMT2-232ENST00000557487 NOX4Q9NPH5 578 aa14.97□□□□□ -0.01
SHMT2-232ENST00000557487 TAS2R10Q9NYW0 307 aa14.97□□□□□ -0.01
SHMT2-232ENST00000557487 GNG8Q9UK08 70 aa14.97□□□□□ -0.01
SHMT2-232ENST00000557487 FBXL4Q9UKA2 621 aa14.97□□□□□ -0.01
SHMT2-232ENST00000557487 PPIEQ9UNP9 301 aaKnown RBP14.97□□□□□ -0.01
SHMT2-232ENST00000557487 OR2M5A3KFT3 312 aa14.96□□□□□ -0.01
SHMT2-232ENST00000557487 MFSD2BA6NFX1 497 aa14.96□□□□□ -0.01
SHMT2-232ENST00000557487 ARPC1BO15143 372 aaKnown RBP14.96□□□□□ -0.01
SHMT2-232ENST00000557487 SCO1O75880 301 aa14.96□□□□□ -0.01
SHMT2-232ENST00000557487 NDUFB6O95139 128 aa14.96□□□□□ -0.01
SHMT2-232ENST00000557487 ACSM4P0C7M7 580 aa14.96□□□□□ -0.01
SHMT2-232ENST00000557487 IGFBP4P22692 258 aa14.96□□□□□ -0.01
SHMT2-232ENST00000557487 PSMA6P60900 246 aaKnown RBP14.96□□□□□ -0.01
SHMT2-232ENST00000557487 PPP2CBP62714 309 aa14.96□□□□□ -0.01
SHMT2-232ENST00000557487 PPP2CAP67775 309 aa14.96□□□□□ -0.01
SHMT2-232ENST00000557487 SIM1P81133 766 aaPredicted RBP14.96□□□□□ -0.01
SHMT2-232ENST00000557487 STX4Q12846 297 aa14.96□□□□□ -0.01
SHMT2-232ENST00000557487 FHL1Q13642 323 aa14.96□□□□□ -0.01
SHMT2-232ENST00000557487 RUNX2Q13950 521 aa14.96□□□□□ -0.01
SHMT2-232ENST00000557487 KIR2DS3Q14952 304 aa14.96□□□□□ -0.01
SHMT2-232ENST00000557487 PDGFRLQ15198 375 aa14.96□□□□□ -0.01
SHMT2-232ENST00000557487 APOOLQ6UXV4 268 aa14.96□□□□□ -0.01
SHMT2-232ENST00000557487 DPY19L2P2Q6ZN68 376 aa14.96□□□□□ -0.01
SHMT2-232ENST00000557487 DNM1P46Q6ZS02 220 aa14.96□□□□□ -0.01
SHMT2-232ENST00000557487 OVCH2Q7RTZ1 564 aa14.96□□□□□ -0.01
SHMT2-232ENST00000557487 CAMKVQ8NCB2 501 aa14.96□□□□□ -0.01
SHMT2-232ENST00000557487 HOXB13Q92826 284 aaPredicted RBP14.96□□□□□ -0.01
SHMT2-232ENST00000557487 SLC25A38Q96DW6 304 aa14.96□□□□□ -0.01
SHMT2-232ENST00000557487 SCARF2Q96GP6 870 aaPredicted RBP14.96□□□□□ -0.01
SHMT2-232ENST00000557487 DPYSL5Q9BPU6 564 aa14.96□□□□□ -0.01
SHMT2-232ENST00000557487 RSPH9Q9H1X1 276 aaPredicted RBP14.96□□□□□ -0.01
SHMT2-232ENST00000557487 ING1Q9UK53 422 aaPredicted RBP14.96□□□□□ -0.01
SHMT2-232ENST00000557487 FOXJ3Q9UPW0 622 aa14.96□□□□□ -0.01
SHMT2-232ENST00000557487 ENTPD2Q9Y5L3 495 aa14.96□□□□□ -0.01
SHMT2-232ENST00000557487 ARPC4-TTLL3A0A0A6YYG9 625 aa14.96□□□□□ -0.02
SHMT2-232ENST00000557487 A0A1W2PPK0 400 aa14.96□□□□□ -0.02
SHMT2-232ENST00000557487 ARPC3O15145 178 aa14.96□□□□□ -0.02
SHMT2-232ENST00000557487 TNFSF14O43557 240 aa14.96□□□□□ -0.02
SHMT2-232ENST00000557487 GALR3O60755 368 aaPredicted RBP14.96□□□□□ -0.02
SHMT2-232ENST00000557487 PPM1BO75688 479 aa14.96□□□□□ -0.02
SHMT2-232ENST00000557487 TOXO94900 526 aa14.96□□□□□ -0.02
SHMT2-232ENST00000557487 ALDOBP05062 364 aa14.96□□□□□ -0.02
SHMT2-232ENST00000557487 GYPBP06028 91 aa14.96□□□□□ -0.02
SHMT2-232ENST00000557487 HOXD4P09016 255 aaPredicted RBP14.96□□□□□ -0.02
SHMT2-232ENST00000557487 PTH2RP49190 550 aa14.96□□□□□ -0.02
SHMT2-232ENST00000557487 RPS21P63220 83 aaKnown RBP14.96□□□□□ -0.02
SHMT2-232ENST00000557487 SGCGQ13326 291 aa14.96□□□□□ -0.02
SHMT2-232ENST00000557487 CAMK1Q14012 370 aa14.96□□□□□ -0.02
SHMT2-232ENST00000557487 TMEM69Q5SWH9 247 aa14.96□□□□□ -0.02
SHMT2-232ENST00000557487 SLC25A25Q6KCM7 469 aa14.96□□□□□ -0.02
SHMT2-232ENST00000557487 FAM122CQ6P4D5 195 aa14.96□□□□□ -0.02
SHMT2-232ENST00000557487 LRRN1Q6UXK5 716 aa14.96□□□□□ -0.02
SHMT2-232ENST00000557487 LINC00114Q6XXX2 140 aa14.96□□□□□ -0.02
SHMT2-232ENST00000557487 ZNF550Q7Z398 422 aa14.96□□□□□ -0.02
SHMT2-232ENST00000557487 THEM6Q8WUY1 208 aa14.96□□□□□ -0.02
SHMT2-232ENST00000557487 ELMOD3Q96FG2 381 aa14.96□□□□□ -0.02
SHMT2-232ENST00000557487 WBP1Q96G27 269 aa14.96□□□□□ -0.02
SHMT2-232ENST00000557487 DERL3Q96Q80 235 aa14.96□□□□□ -0.02
SHMT2-232ENST00000557487 ORAI3Q9BRQ5 295 aa14.96□□□□□ -0.02
SHMT2-232ENST00000557487 MKKSQ9NPJ1 570 aaPredicted RBP14.96□□□□□ -0.02
SHMT2-232ENST00000557487 SDHAF2Q9NX18 166 aa14.96□□□□□ -0.02
SHMT2-232ENST00000557487 FLVCR2Q9UPI3 526 aa14.96□□□□□ -0.02
SHMT2-232ENST00000557487 SZT2Q5T011 3432 aa14.95□□□□□ -0.02
SHMT2-232ENST00000557487 UBE2QL1A1L167 161 aa14.95□□□□□ -0.02
SHMT2-232ENST00000557487 MCRIP1C9JLW8 97 aa14.95□□□□□ -0.02
SHMT2-232ENST00000557487 NKX2-2O95096 273 aa14.95□□□□□ -0.02
SHMT2-232ENST00000557487 HIST1H1CP16403 213 aaKnown RBP14.95□□□□□ -0.02
SHMT2-232ENST00000557487 EPCAMP16422 314 aa14.95□□□□□ -0.02
SHMT2-232ENST00000557487 VIPR2P41587 438 aa14.95□□□□□ -0.02
SHMT2-232ENST00000557487 GPR143P51810 404 aa14.95□□□□□ -0.02
SHMT2-232ENST00000557487 ART1P52961 327 aa14.95□□□□□ -0.02
SHMT2-232ENST00000557487 DLX5P56178 289 aa14.95□□□□□ -0.02
SHMT2-232ENST00000557487 HTR4Q13639 388 aa14.95□□□□□ -0.02
SHMT2-232ENST00000557487 ULK3Q6PHR2 472 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms