RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 TCF21O43680 179 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 E2F6O75461 281 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 KCNK2O95069 426 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 ZNF205O95201 554 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 SBK3P0C264 359 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 APEHP13798 732 aaKnown RBP5.13□□□□□ -1.59
VPS33B-207ENST00000557470 RPS2P15880 293 aaKnown RBP5.13□□□□□ -1.59
VPS33B-207ENST00000557470 ITGA2P17301 1181 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 PTAFRP25105 342 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 HSD17B3P37058 310 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 MAP3K8P41279 467 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 EIF1P41567 113 aaKnown RBP5.13□□□□□ -1.59
VPS33B-207ENST00000557470 NR4A2P43354 598 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 MAGEA12P43365 314 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 GSTM5P46439 218 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 FABP6P51161 128 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 ZNF83P51522 516 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 PPP5CP53041 499 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 PLTPP55058 493 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 GUCY2DQ02846 1103 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 ZNF117Q03924 483 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 C2orf80Q0P641 193 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 LRRC74AQ0VAA2 488 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 SQLEQ14534 574 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 RAB39AQ14964 217 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 TRADDQ15628 312 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 CR1LQ2VPA4 569 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 ANKDD1AQ495B1 522 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 FAM69AQ5T7M9 428 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 FAM71E1Q6IPT2 247 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 ZNF544Q6NX49 715 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 ZDHHC24Q6UX98 284 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 TMEM108Q6UXF1 575 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 C12orf54Q6X4T0 127 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 GPRIN3Q6ZVF9 776 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 H1FNTQ75WM6 255 aaPredicted RBP5.13□□□□□ -1.59
VPS33B-207ENST00000557470 SSX8Q7RTT4 187 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 ZNF551Q7Z340 670 aaPredicted RBP5.13□□□□□ -1.59
VPS33B-207ENST00000557470 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.13□□□□□ -1.59
VPS33B-207ENST00000557470 P2RY8Q86VZ1 359 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 SLC43A2Q8N370 569 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 ZNF433Q8N7K0 673 aaPredicted RBP5.13□□□□□ -1.59
VPS33B-207ENST00000557470 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.13□□□□□ -1.59
VPS33B-207ENST00000557470 GLB1L3Q8NCI6 653 aaPredicted RBP5.13□□□□□ -1.59
VPS33B-207ENST00000557470 ATP6V1C2Q8NEY4 427 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 OR52N5Q8NH56 324 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 B4GALNT2Q8NHY0 566 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 FAM76AQ8TAV0 307 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 ZFP90Q8TF47 636 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 HOXB13Q92826 284 aaPredicted RBP5.13□□□□□ -1.59
VPS33B-207ENST00000557470 ZNF524Q96C55 264 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 OTUB1Q96FW1 271 aaPredicted RBP5.13□□□□□ -1.59
VPS33B-207ENST00000557470 APOPT1Q96IL0 206 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 ZNF300Q96RE9 604 aaPredicted RBP5.13□□□□□ -1.59
VPS33B-207ENST00000557470 KCNA7Q96RP8 456 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 ZNF382Q96SR6 550 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 MRPL57Q9BQC6 102 aaKnown RBP5.13□□□□□ -1.59
VPS33B-207ENST00000557470 PSD2Q9BQI7 771 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 SOX7Q9BT81 388 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 C1QTNF3Q9BXJ4 246 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 MRPL46Q9H2W6 279 aaKnown RBP5.13□□□□□ -1.59
VPS33B-207ENST00000557470 HHATLQ9HCP6 504 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 MIEF1Q9NQG6 463 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 TAS2R7Q9NYW3 318 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 NDUFAF4Q9P032 175 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 KLHL9Q9P2J3 617 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 NFU1Q9UMS0 254 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 MGAT4BQ9UQ53 548 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 SAR1BQ9Y6B6 198 aa5.13□□□□□ -1.59
VPS33B-207ENST00000557470 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 A0A087WUV0 522 aaPredicted RBP5.12□□□□□ -1.59
VPS33B-207ENST00000557470 A0A1W2PQD3 144 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 GJE1A6NN92 205 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 M0R1B8 84 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 SMAD9O15198 467 aaKnown RBP5.12□□□□□ -1.59
VPS33B-207ENST00000557470 ZSCAN12O43309 604 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 CYTIPO60759 359 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 RAD51DO75771 328 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 SUPT7LO94864 414 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 NKX2-2O95096 273 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 TGFAP01135 160 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 IGHV3-9P01782 118 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 SNRNP70P08621 437 aaKnown RBP5.12□□□□□ -1.59
VPS33B-207ENST00000557470 CELA3BP08861 270 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 IFI6P09912 130 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 ACP2P11117 423 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 PRPS2P11908 318 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 HPGDP15428 266 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 MALP21145 153 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 MAPK3P27361 379 aaPredicted RBP5.12□□□□□ -1.59
VPS33B-207ENST00000557470 HMOX2P30519 316 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 GRK5P34947 590 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 PGM1P36871 562 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 PSMB10P40306 273 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 PDLIM4P50479 330 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 PRKAG1P54619 331 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 RAC3P60763 192 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 RPP30P78346 268 aaKnown RBP5.12□□□□□ -1.59
VPS33B-207ENST00000557470 CAV1Q03135 178 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 CHRNEQ04844 493 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms