RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 SERINC4A6NH21 518 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 TRIM64BA6NI03 449 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 OR6C76A6NM76 312 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 CPSF4LA6NMK7 179 aaKnown RBP4.07□□□□□ -1.76
SRP54-212ENST00000556992 ENO4A6NNW6 628 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 EFCAB7A8K855 629 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 NPIPB9F8W1W9 429 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 GTPBP1O00178 669 aaKnown RBP4.07□□□□□ -1.76
SRP54-212ENST00000556992 TLX2O43763 284 aaPredicted RBP4.07□□□□□ -1.76
SRP54-212ENST00000556992 ENTPD6O75354 484 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 CDC123O75794 336 aaPredicted RBP4.07□□□□□ -1.76
SRP54-212ENST00000556992 RCBTB2O95199 551 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 IL33O95760 270 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 CER1O95813 267 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 ONECUT2O95948 504 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 RPLP0P05388 317 aaKnown RBP4.07□□□□□ -1.76
SRP54-212ENST00000556992 CDK1P06493 297 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 HTR1AP08908 422 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 CT62P0C5K7 136 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 CT45A8P0DMV1 189 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 CT45A9P0DMV2 189 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 PIPP12273 146 aaPredicted RBP4.07□□□□□ -1.76
SRP54-212ENST00000556992 CKMT1AP12532 417 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 HPGDP15428 266 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 CCNA2P20248 432 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 PCMT1P22061 227 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 GATA3P23771 443 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 ACVR2AP27037 513 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 CSTF2P33240 577 aaKnown RBP eCLIP4.07□□□□□ -1.76
SRP54-212ENST00000556992 RBM34P42696 430 aaKnown RBP4.07□□□□□ -1.76
SRP54-212ENST00000556992 OMPP47874 163 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 OR1D4P47884 311 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 SLC6A9P48067 706 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 GSSP48637 474 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 ZNF136P52737 540 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 SLC37A1P57057 533 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 COPZ1P61923 177 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 CCL7P80098 99 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 DCDP81605 110 aaKnown RBP4.07□□□□□ -1.76
SRP54-212ENST00000556992 EFNB1P98172 346 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 HOXC5Q00444 222 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 CDK5Q00535 292 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 PSG6Q00889 435 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 ROR2Q01974 943 aaKnown RBP4.07□□□□□ -1.76
SRP54-212ENST00000556992 PRKCDQ05655 676 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 PIGFQ07326 219 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 TRA2AQ13595 282 aaKnown RBP eCLIP4.07□□□□□ -1.76
SRP54-212ENST00000556992 IL11RAQ14626 422 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 OR1Q1Q15612 314 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 SNAPC1Q16533 368 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 MAPK14Q16539 360 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 SYT16Q17RD7 645 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 CD300EQ496F6 205 aaPredicted RBP4.07□□□□□ -1.76
SRP54-212ENST00000556992 MINDY4Q4G0A6 757 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 KLHL26Q53HC5 615 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 CT45A2Q5DJT8 189 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 MFSD4BQ5TF39 518 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 UBE2UQ5VVX9 321 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 TMEM236Q5W0B7 351 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 ZNF626Q68DY1 528 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 C12orf73Q69YU5 71 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 RHBDD2Q6NTF9 364 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 RPL13AP3Q6NVV1 102 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 SLC27A4Q6P1M0 643 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 VWA1Q6PCB0 445 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 ULK3Q6PHR2 472 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 Q6ZPB1 254 aaPredicted RBP4.07□□□□□ -1.76
SRP54-212ENST00000556992 RTL4Q6ZR62 310 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 TMPRSS11FQ6ZWK6 438 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 AHSA2Q719I0 299 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 HMGN2P46Q86SG4 172 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 COMTD1Q86VU5 262 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 ANKRD13BQ86YJ7 626 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 GATAD2AQ86YP4 633 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 MAML2Q8IZL2 1156 aaPredicted RBP4.07□□□□□ -1.76
SRP54-212ENST00000556992 SLC43A2Q8N370 569 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 EID2Q8N6I1 236 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 CLDN22Q8N7P3 220 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 BCORP1Q8N888 145 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 LSMEM1Q8N8F7 131 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 ZNF527Q8NB42 609 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 PLPP5Q8NEB5 264 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 PRSS33Q8NF86 280 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 B3GNT7Q8NFL0 401 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 C16orf52Q8NHV5 167 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 TEX47Q8TBZ9 253 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 DOK4Q8TEW6 326 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 FAR1Q8WVX9 515 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 DNAJA4Q8WW22 397 aaPredicted RBP4.07□□□□□ -1.76
SRP54-212ENST00000556992 TMEM239Q8WW34 195 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 APH1BQ8WW43 257 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 RFKQ969G6 155 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 C12orf43Q96C57 262 aaKnown RBP4.07□□□□□ -1.76
SRP54-212ENST00000556992 ZNF501Q96CX3 271 aaPredicted RBP4.07□□□□□ -1.76
SRP54-212ENST00000556992 TMEM80Q96HE8 168 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 PLEKHA8Q96JA3 519 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 COG8Q96MW5 612 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 IL4I1Q96RQ9 567 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 CCNL2Q96S94 520 aaPredicted RBP4.07□□□□□ -1.76
SRP54-212ENST00000556992 RACGAP1Q9H0H5 632 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms