RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 TXNDC16Q9P2K2 825 aa5.9□□□□□ -1.46
ATXN3-236ENST00000556220 VPS29Q9UBQ0 182 aa5.9□□□□□ -1.46
ATXN3-236ENST00000556220 LGALS13Q9UHV8 139 aa5.9□□□□□ -1.46
ATXN3-236ENST00000556220 DNAH3Q8TD57 4116 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 IGHV1-18A0A0C4DH31 117 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 TMEM129A0AVI4 362 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 VSTM5A8MXK1 200 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 SCDO00767 359 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 GPR171O14626 319 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 KLF11O14901 512 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 WNT9BO14905 357 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 ATP8B1O43520 1251 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 MRPL33O75394 65 aaKnown RBP5.89□□□□□ -1.47
ATXN3-236ENST00000556220 KCNK2O95069 426 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 NKX2-2O95096 273 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 IGFBP1P08833 259 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-236ENST00000556220 SBK3P0C264 359 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 SAGP10523 405 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-236ENST00000556220 ANPEPP15144 967 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 ADRA2CP18825 462 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 LCN1P31025 176 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 GPR6P46095 362 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-236ENST00000556220 HMGA2P52926 109 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 TMEM33P57088 247 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 LMO4P61968 165 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 RAE1P78406 368 aaKnown RBP5.89□□□□□ -1.47
ATXN3-236ENST00000556220 CBX1P83916 185 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 MYBPC1Q00872 1141 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 TRAF3Q13114 568 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 CD226Q15762 336 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 TOMM34Q15785 309 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-236ENST00000556220 ADRM1Q16186 407 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 GGTA1PQ4G0N0 100 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 CEP85LQ5SZL2 805 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 C9orf135Q5VTT2 229 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 ABLIM2Q6H8Q1 611 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 CGB2Q6NT52 195 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 ANKRD16Q6P6B7 361 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 RBMS3Q6XE24 437 aaKnown RBP5.89□□□□□ -1.47
ATXN3-236ENST00000556220 TMPPEQ6ZT21 453 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 IKBIPQ70UQ0 350 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 MTERF4Q7Z6M4 381 aaKnown RBP5.89□□□□□ -1.47
ATXN3-236ENST00000556220 CMC1Q7Z7K0 106 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 MTDHQ86UE4 582 aaKnown RBP5.89□□□□□ -1.47
ATXN3-236ENST00000556220 CARM1Q86X55 608 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 ZBED8Q8IZ13 594 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 ZNF527Q8NB42 609 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 OR4F15Q8NGB8 312 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 OR4F6Q8NGB9 312 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 Q8TCH9 128 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 GPR151Q8TDV0 419 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 GPR119Q8TDV5 335 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 C16orf78Q8WTQ4 265 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 UBLCP1Q8WVY7 318 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-236ENST00000556220 CDKL2Q92772 493 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 SLC38A2Q96QD8 506 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 OR5B2Q96R09 309 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 KCNS3Q9BQ31 491 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 KATNB1Q9BVA0 655 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 SHCBP1LQ9BZQ2 653 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 VPS11Q9H270 941 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 MMP27Q9H306 513 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 GLIPR2Q9H4G4 154 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 PIF1Q9H611 641 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 NARFLQ9H6Q4 476 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 UBQLN4Q9NRR5 601 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 EMCNQ9ULC0 261 aa5.89□□□□□ -1.47
ATXN3-236ENST00000556220 A0A0G2JMP0 313 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 A0A0X1KG70 313 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 SH3PXD2BA1X283 911 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 SMIM23A6NLE4 172 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 ZNF716A6NP11 495 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 J3QLI3 93 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 POLR3GO15318 223 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-236ENST00000556220 TYROBPO43914 113 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 PCDH7O60245 1069 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 PRSS23O95084 383 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 H6PDO95479 791 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 NUDT14O95848 222 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 CRYAAP02489 173 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 ADRA2AP08913 450 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 IFI6P09912 130 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 NPR2P20594 1047 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 DDCP20711 480 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 PAX7P23759 505 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 COL8A2P25067 703 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 MPGP29372 298 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 TYK2P29597 1187 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 SPRP35270 261 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-236ENST00000556220 THBS4P35443 961 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 MAGEA12P43365 314 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 DIO1P49895 249 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 P2RX1P51575 399 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 SUMO3P55854 103 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-236ENST00000556220 CSNK2A1P68400 391 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-236ENST00000556220 NAAAQ02083 359 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 POU3F1Q03052 451 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-236ENST00000556220 ZNF117Q03924 483 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 FAM83EQ2M2I3 478 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 VPS26BQ4G0F5 336 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms