RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 ATP6V1C2Q8NEY4 427 aa9.81□□□□□ -0.84
SHMT2-218ENST00000555213 ELOA3Q8NG57 546 aa9.81□□□□□ -0.84
SHMT2-218ENST00000555213 OR10G2Q8NGC3 310 aa9.81□□□□□ -0.84
SHMT2-218ENST00000555213 OR9Q2Q8NGE9 314 aa9.81□□□□□ -0.84
SHMT2-218ENST00000555213 OR2V1Q8NHB1 315 aa9.81□□□□□ -0.84
SHMT2-218ENST00000555213 RNF217Q8TC41 542 aa9.81□□□□□ -0.84
SHMT2-218ENST00000555213 ZPLD1Q8TCW7 415 aa9.81□□□□□ -0.84
SHMT2-218ENST00000555213 DNAJA4Q8WW22 397 aaPredicted RBP9.81□□□□□ -0.84
SHMT2-218ENST00000555213 RELTQ969Z4 430 aa9.81□□□□□ -0.84
SHMT2-218ENST00000555213 DDIT4LQ96D03 193 aa9.81□□□□□ -0.84
SHMT2-218ENST00000555213 SLC41A3Q96GZ6 507 aa9.81□□□□□ -0.84
SHMT2-218ENST00000555213 FNDC11Q9BVV2 318 aa9.81□□□□□ -0.84
SHMT2-218ENST00000555213 POLR2J2Q9GZM3 115 aaKnown RBP9.81□□□□□ -0.84
SHMT2-218ENST00000555213 POLR2J3Q9H1A7 115 aaKnown RBP9.81□□□□□ -0.84
SHMT2-218ENST00000555213 TOR3AQ9H497 397 aa9.81□□□□□ -0.84
SHMT2-218ENST00000555213 FAM118AQ9NWS6 357 aa9.81□□□□□ -0.84
SHMT2-218ENST00000555213 SMPD3Q9NY59 655 aaPredicted RBP9.81□□□□□ -0.84
SHMT2-218ENST00000555213 REV1Q9UBZ9 1251 aa9.81□□□□□ -0.84
SHMT2-218ENST00000555213 MCTS1Q9ULC4 181 aaKnown RBP9.81□□□□□ -0.84
SHMT2-218ENST00000555213 MEMO1Q9Y316 297 aa9.81□□□□□ -0.84
SHMT2-218ENST00000555213 MYO18BQ8IUG5 2567 aa9.81□□□□□ -0.84
SHMT2-218ENST00000555213 POLEQ07864 2286 aa9.81□□□□□ -0.84
SHMT2-218ENST00000555213 ZNF407Q9C0G0 2248 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 TMED7-TICAM2A0A0A6YYA0 188 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 A0A0B4J2E0 115 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 A0A1B0GWA3 101 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 A0A1B0GX12 115 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 TRAPPC13A5PLN9 417 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 SLC22A20A6NK97 555 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 CLCA1A8K7I4 914 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 SLC16A6O15403 523 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 ZNF208O43345 1280 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 KLF4O43474 513 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 CCNB2O95067 398 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 AGFG2O95081 481 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 SYNGR4O95473 234 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 THRBP10828 461 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 ANXA8P13928 327 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 CCNA2P20248 432 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 IL11P20809 199 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 CLK1P49759 484 aaKnown RBP9.8□□□□□ -0.84
SHMT2-218ENST00000555213 ARHGDIAP52565 204 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 SMSP52788 366 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 CLDN20P56880 219 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 SMIM11AP58511 58 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 TAS2R41P59536 307 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 CSNK2A1P68400 391 aaPredicted RBP9.8□□□□□ -0.84
SHMT2-218ENST00000555213 TRAM2Q15035 370 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 TMEM176BQ3YBM2 270 aaPredicted RBP9.8□□□□□ -0.84
SHMT2-218ENST00000555213 SYT14P1Q58G82 188 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 ALG10BQ5I7T1 473 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 EMC4Q5J8M3 183 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 C1orf94Q6P1W5 598 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 PGBD2Q6P3X8 592 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 ZNF613Q6PF04 617 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 RPTNQ6XPR3 784 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 P4HA3Q7Z4N8 544 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 GALNT5Q7Z7M9 940 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 GGNQ86UU5 652 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 C3orf49Q96BT1 292 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 ZHX1-C8orf76Q96EF9 292 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 RDH12Q96NR8 316 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 OR5B2Q96R09 309 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 TRIB1Q96RU8 372 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 NPAS1Q99742 590 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 TUBA1CQ9BQE3 449 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 ZNF426Q9BUY5 554 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 ADI1Q9BV57 179 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 GRIP2Q9C0E4 1043 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 ADAM19Q9H013 955 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 ANKRD19PQ9H560 264 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 CALHM2Q9HA72 323 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 C12orf10Q9HB07 376 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 OSGIN1Q9UJX0 560 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 TMED7Q9Y3B3 224 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 ZNF175Q9Y473 711 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 NCKAP5O14513 1909 aa9.8□□□□□ -0.84
SHMT2-218ENST00000555213 PRRC2CQ9Y520 2896 aaKnown RBP9.79□□□□□ -0.84
SHMT2-218ENST00000555213 CD8B2A6NJW9 211 aa9.79□□□□□ -0.84
SHMT2-218ENST00000555213 H0YAE9 185 aa9.79□□□□□ -0.84
SHMT2-218ENST00000555213 TNFSF11O14788 317 aa9.79□□□□□ -0.84
SHMT2-218ENST00000555213 CLIC3O95833 236 aa9.79□□□□□ -0.84
SHMT2-218ENST00000555213 IGFBP1P08833 259 aaPredicted RBP9.79□□□□□ -0.84
SHMT2-218ENST00000555213 CAPGP40121 348 aa9.79□□□□□ -0.84
SHMT2-218ENST00000555213 OMPP47874 163 aa9.79□□□□□ -0.84
SHMT2-218ENST00000555213 HSPA13P48723 471 aa9.79□□□□□ -0.84
SHMT2-218ENST00000555213 CLDN15P56746 228 aa9.79□□□□□ -0.84
SHMT2-218ENST00000555213 CARD18P57730 90 aa9.79□□□□□ -0.84
SHMT2-218ENST00000555213 ST3GAL3Q11203 375 aa9.79□□□□□ -0.84
SHMT2-218ENST00000555213 NSUN5P2Q63ZY6 315 aa9.79□□□□□ -0.84
SHMT2-218ENST00000555213 LAIR2Q6ISS4 152 aa9.79□□□□□ -0.84
SHMT2-218ENST00000555213 KLHL17Q6TDP4 642 aa9.79□□□□□ -0.84
SHMT2-218ENST00000555213 UGT2A3Q6UWM9 527 aa9.79□□□□□ -0.84
SHMT2-218ENST00000555213 C5orf46Q6UWT4 87 aa9.79□□□□□ -0.84
SHMT2-218ENST00000555213 CD300LDQ6UXZ3 194 aa9.79□□□□□ -0.84
SHMT2-218ENST00000555213 ATG4DQ86TL0 474 aaPredicted RBP9.79□□□□□ -0.84
SHMT2-218ENST00000555213 MEX3DQ86XN8 651 aaKnown RBP9.79□□□□□ -0.84
SHMT2-218ENST00000555213 CCDC71Q8IV32 467 aaPredicted RBP9.79□□□□□ -0.84
SHMT2-218ENST00000555213 FAM26EQ8N5C1 309 aa9.79□□□□□ -0.84
SHMT2-218ENST00000555213 DHRSXQ8N5I4 330 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms