RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 LIPHQ8WWY8 451 aa13.26□□□□□ -0.29
MTHFD1-204ENST00000553405 ACOT11Q8WXI4 607 aaPredicted RBP13.26□□□□□ -0.29
MTHFD1-204ENST00000553405 CPNE4Q96A23 557 aaPredicted RBP13.26□□□□□ -0.29
MTHFD1-204ENST00000553405 TRIB1Q96RU8 372 aa13.26□□□□□ -0.29
MTHFD1-204ENST00000553405 ZNF347Q96SE7 839 aa13.26□□□□□ -0.29
MTHFD1-204ENST00000553405 COL12A1Q99715 3063 aa13.26□□□□□ -0.29
MTHFD1-204ENST00000553405 ALKBH4Q9NXW9 302 aa13.26□□□□□ -0.29
MTHFD1-204ENST00000553405 SELENONQ9NZV5 590 aa13.26□□□□□ -0.29
MTHFD1-204ENST00000553405 SEC14L4Q9UDX3 406 aa13.26□□□□□ -0.29
MTHFD1-204ENST00000553405 TESMINQ9Y4I5 508 aa13.26□□□□□ -0.29
MTHFD1-204ENST00000553405 INTS1Q8N201 2190 aaKnown RBP13.25□□□□□ -0.29
MTHFD1-204ENST00000553405 IGHV3-15A0A0B4J1V0 119 aa13.25□□□□□ -0.29
MTHFD1-204ENST00000553405 A0A0G2JNJ9 132 aa13.25□□□□□ -0.29
MTHFD1-204ENST00000553405 A0A1B0GUH1 482 aa13.25□□□□□ -0.29
MTHFD1-204ENST00000553405 WIPF3A6NGB9 483 aa13.25□□□□□ -0.29
MTHFD1-204ENST00000553405 ZNF716A6NP11 495 aa13.25□□□□□ -0.29
MTHFD1-204ENST00000553405 ANKRD65E5RJM6 399 aa13.25□□□□□ -0.29
MTHFD1-204ENST00000553405 CCL21O00585 134 aa13.25□□□□□ -0.29
MTHFD1-204ENST00000553405 KLF4O43474 513 aa13.25□□□□□ -0.29
MTHFD1-204ENST00000553405 CIB2O75838 187 aa13.25□□□□□ -0.29
MTHFD1-204ENST00000553405 RCBTB2O95199 551 aa13.25□□□□□ -0.29
MTHFD1-204ENST00000553405 AHSA1O95433 338 aa13.25□□□□□ -0.29
MTHFD1-204ENST00000553405 STAMBPO95630 424 aa13.25□□□□□ -0.29
MTHFD1-204ENST00000553405 TSPAN19P0C672 248 aa13.25□□□□□ -0.29
MTHFD1-204ENST00000553405 RNF224P0DH78 156 aa13.25□□□□□ -0.29
MTHFD1-204ENST00000553405 HOXB6P17509 224 aaKnown RBP13.25□□□□□ -0.29
MTHFD1-204ENST00000553405 FPR1P21462 350 aa13.25□□□□□ -0.29
MTHFD1-204ENST00000553405 RRM2P31350 389 aa13.25□□□□□ -0.29
MTHFD1-204ENST00000553405 RPS5P46782 204 aaKnown RBP13.25□□□□□ -0.29
MTHFD1-204ENST00000553405 CTBP2P56545 445 aa13.25□□□□□ -0.29
MTHFD1-204ENST00000553405 CSNK2A1P68400 391 aaPredicted RBP13.25□□□□□ -0.29
MTHFD1-204ENST00000553405 SLC35A1P78382 337 aa13.25□□□□□ -0.29
MTHFD1-204ENST00000553405 PDSS1Q5T2R2 415 aa13.25□□□□□ -0.29
MTHFD1-204ENST00000553405 ZNF770Q6IQ21 691 aaPredicted RBP13.25□□□□□ -0.29
MTHFD1-204ENST00000553405 PAQR6Q6TCH4 344 aa13.25□□□□□ -0.29
MTHFD1-204ENST00000553405 MBOAT2Q6ZWT7 520 aa13.25□□□□□ -0.29
MTHFD1-204ENST00000553405 FJX1Q86VR8 437 aa13.25□□□□□ -0.29
MTHFD1-204ENST00000553405 ROBO4Q8WZ75 1007 aa13.25□□□□□ -0.29
MTHFD1-204ENST00000553405 CCDC120Q96HB5 630 aa13.25□□□□□ -0.29
MTHFD1-204ENST00000553405 HS6ST2Q96MM7 605 aa13.25□□□□□ -0.29
MTHFD1-204ENST00000553405 NTN4Q9HB63 628 aa13.25□□□□□ -0.29
MTHFD1-204ENST00000553405 ARMC1Q9NVT9 282 aa13.25□□□□□ -0.29
MTHFD1-204ENST00000553405 Q9UFV3 132 aa13.25□□□□□ -0.29
MTHFD1-204ENST00000553405 AURKCQ9UQB9 309 aa13.25□□□□□ -0.29
MTHFD1-204ENST00000553405 FAM32AQ9Y421 112 aaKnown RBP13.25□□□□□ -0.29
MTHFD1-204ENST00000553405 ADGRG4Q8IZF6 3080 aa13.25□□□□□ -0.29
MTHFD1-204ENST00000553405 IGKV3D-15A0A087WSY6 115 aa13.24□□□□□ -0.29
MTHFD1-204ENST00000553405 SH3PXD2BA1X283 911 aa13.24□□□□□ -0.29
MTHFD1-204ENST00000553405 AQP7P3A6NL99 342 aa13.24□□□□□ -0.29
MTHFD1-204ENST00000553405 ENO4A6NNW6 628 aa13.24□□□□□ -0.29
MTHFD1-204ENST00000553405 H3BNX3 289 aa13.24□□□□□ -0.29
MTHFD1-204ENST00000553405 KPNA4O00629 521 aaPredicted RBP13.24□□□□□ -0.29
MTHFD1-204ENST00000553405 OR2T1O43869 369 aa13.24□□□□□ -0.29
MTHFD1-204ENST00000553405 CYTIPO60759 359 aa13.24□□□□□ -0.29
MTHFD1-204ENST00000553405 TNFSF13O75888 250 aa13.24□□□□□ -0.29
MTHFD1-204ENST00000553405 ASAH2BP0C7U1 165 aa13.24□□□□□ -0.29
MTHFD1-204ENST00000553405 GRPRP30550 384 aa13.24□□□□□ -0.29
MTHFD1-204ENST00000553405 SLC16A1P53985 500 aa13.24□□□□□ -0.29
MTHFD1-204ENST00000553405 CASP6P55212 293 aa13.24□□□□□ -0.29
MTHFD1-204ENST00000553405 OR2B6P58173 313 aa13.24□□□□□ -0.29
MTHFD1-204ENST00000553405 PRKCDQ05655 676 aa13.24□□□□□ -0.29
MTHFD1-204ENST00000553405 PMPCAQ10713 525 aa13.24□□□□□ -0.29
MTHFD1-204ENST00000553405 FOXF2Q12947 444 aa13.24□□□□□ -0.29
MTHFD1-204ENST00000553405 SF3B4Q15427 424 aaKnown RBP eCLIP13.24□□□□□ -0.292e-7■■■□□ 19.1
MTHFD1-204ENST00000553405 OR7A5Q15622 319 aa13.24□□□□□ -0.29
MTHFD1-204ENST00000553405 RIPPLY2Q5TAB7 128 aa13.24□□□□□ -0.29
MTHFD1-204ENST00000553405 OR2T5Q6IEZ7 315 aa13.24□□□□□ -0.29
MTHFD1-204ENST00000553405 TTC33Q6PID6 262 aaPredicted RBP13.24□□□□□ -0.29
MTHFD1-204ENST00000553405 FCRLAQ7L513 359 aa13.24□□□□□ -0.29
MTHFD1-204ENST00000553405 CCDC103Q8IW40 242 aa13.24□□□□□ -0.29
MTHFD1-204ENST00000553405 NRMQ8IXM6 262 aa13.24□□□□□ -0.29
MTHFD1-204ENST00000553405 LRRC17Q8N6Y2 441 aa13.24□□□□□ -0.29
MTHFD1-204ENST00000553405 TMEM99Q8N816 258 aa13.24□□□□□ -0.29
MTHFD1-204ENST00000553405 OR2T29Q8NH02 315 aa13.24□□□□□ -0.29
MTHFD1-204ENST00000553405 RNF217Q8TC41 542 aa13.24□□□□□ -0.29
MTHFD1-204ENST00000553405 ABHD3Q8WU67 409 aa13.24□□□□□ -0.29
MTHFD1-204ENST00000553405 RAB3IPQ96QF0 476 aaPredicted RBP13.24□□□□□ -0.29
MTHFD1-204ENST00000553405 EPYCQ99645 322 aa13.24□□□□□ -0.29
MTHFD1-204ENST00000553405 GPA33Q99795 319 aa13.24□□□□□ -0.29
MTHFD1-204ENST00000553405 TIGARQ9NQ88 270 aa13.24□□□□□ -0.29
MTHFD1-204ENST00000553405 B3GAT1Q9P2W7 334 aa13.24□□□□□ -0.29
MTHFD1-204ENST00000553405 USP9YO00507 2555 aaPredicted RBP13.23□□□□□ -0.29
MTHFD1-204ENST00000553405 ERICH4A6NGS2 130 aa13.23□□□□□ -0.29
MTHFD1-204ENST00000553405 M0R082 166 aa13.23□□□□□ -0.29
MTHFD1-204ENST00000553405 EIF1BO60739 113 aaKnown RBP13.23□□□□□ -0.29
MTHFD1-204ENST00000553405 AKR7A3O95154 331 aa13.23□□□□□ -0.29
MTHFD1-204ENST00000553405 HPRP00739 348 aa13.23□□□□□ -0.29
MTHFD1-204ENST00000553405 MAKP20794 623 aa13.23□□□□□ -0.29
MTHFD1-204ENST00000553405 NTF4P34130 210 aa13.23□□□□□ -0.29
MTHFD1-204ENST00000553405 OMPP47874 163 aa13.23□□□□□ -0.29
MTHFD1-204ENST00000553405 SPIBQ01892 262 aa13.23□□□□□ -0.29
MTHFD1-204ENST00000553405 CDSNQ15517 529 aa13.23□□□□□ -0.29
MTHFD1-204ENST00000553405 SGCBQ16585 318 aa13.23□□□□□ -0.29
MTHFD1-204ENST00000553405 TMEM179BQ7Z7N9 219 aa13.23□□□□□ -0.29
MTHFD1-204ENST00000553405 RNF113BQ8IZP6 322 aaKnown RBP13.23□□□□□ -0.29
MTHFD1-204ENST00000553405 SCAIQ8N9R8 606 aa13.23□□□□□ -0.29
MTHFD1-204ENST00000553405 ADPRHL1Q8NDY3 354 aa13.23□□□□□ -0.29
MTHFD1-204ENST00000553405 OR4K5Q8NGD3 323 aa13.23□□□□□ -0.29
MTHFD1-204ENST00000553405 OR52J3Q8NH60 311 aa13.23□□□□□ -0.29
MTHFD1-204ENST00000553405 ZNF417Q8TAU3 575 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms