RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 SMIM23A6NLE4 172 aa7.86□□□□□ -1.15
SYNE2-209ENST00000553308 ZNF587BE7ETH6 402 aa7.86□□□□□ -1.15
SYNE2-209ENST00000553308 SLCO1B7G3V0H7 640 aa7.86□□□□□ -1.15
SYNE2-209ENST00000553308 ZNF208O43345 1280 aa7.86□□□□□ -1.15
SYNE2-209ENST00000553308 KRT33AO76009 404 aa7.86□□□□□ -1.15
SYNE2-209ENST00000553308 IGLV1-44P01699 117 aa7.86□□□□□ -1.15
SYNE2-209ENST00000553308 SHBGP04278 402 aa7.86□□□□□ -1.15
SYNE2-209ENST00000553308 ERCC1P07992 297 aaPredicted RBP7.86□□□□□ -1.15
SYNE2-209ENST00000553308 G6PDP11413 515 aa7.86□□□□□ -1.15
SYNE2-209ENST00000553308 IFNGR1P15260 489 aa7.86□□□□□ -1.15
SYNE2-209ENST00000553308 ALDH3A1P30838 453 aa7.86□□□□□ -1.15
SYNE2-209ENST00000553308 ARRB2P32121 409 aa7.86□□□□□ -1.15
SYNE2-209ENST00000553308 THBS4P35443 961 aa7.86□□□□□ -1.15
SYNE2-209ENST00000553308 HTR3AP46098 478 aa7.86□□□□□ -1.15
SYNE2-209ENST00000553308 COMPP49747 757 aaPredicted RBP7.86□□□□□ -1.15
SYNE2-209ENST00000553308 SELENOPP49908 381 aa7.86□□□□□ -1.15
SYNE2-209ENST00000553308 CEACAM7Q14002 265 aa7.86□□□□□ -1.15
SYNE2-209ENST00000553308 OR7A5Q15622 319 aa7.86□□□□□ -1.15
SYNE2-209ENST00000553308 ADRM1Q16186 407 aa7.86□□□□□ -1.15
SYNE2-209ENST00000553308 ATAD3BQ5T9A4 648 aa7.86□□□□□ -1.15
SYNE2-209ENST00000553308 AP1ARQ63HQ0 302 aa7.86□□□□□ -1.15
SYNE2-209ENST00000553308 SPATA21Q7Z572 469 aa7.86□□□□□ -1.15
SYNE2-209ENST00000553308 ABHD12BQ7Z5M8 362 aaPredicted RBP7.86□□□□□ -1.15
SYNE2-209ENST00000553308 GPAT4Q86UL3 456 aa7.86□□□□□ -1.15
SYNE2-209ENST00000553308 ANKRD46Q86W74 232 aa7.86□□□□□ -1.15
SYNE2-209ENST00000553308 GSPT2Q8IYD1 628 aaKnown RBP7.86□□□□□ -1.15
SYNE2-209ENST00000553308 C3orf56Q8N813 242 aa7.86□□□□□ -1.15
SYNE2-209ENST00000553308 NUP37Q8NFH4 326 aa7.86□□□□□ -1.15
SYNE2-209ENST00000553308 OR4F15Q8NGB8 312 aa7.86□□□□□ -1.15
SYNE2-209ENST00000553308 OR4A15Q8NGL6 344 aa7.86□□□□□ -1.15
SYNE2-209ENST00000553308 UBASH3BQ8TF42 649 aa7.86□□□□□ -1.15
SYNE2-209ENST00000553308 WDR60Q8WVS4 1066 aa7.86□□□□□ -1.15
SYNE2-209ENST00000553308 OIT3Q8WWZ8 545 aa7.86□□□□□ -1.15
SYNE2-209ENST00000553308 BCL2L2Q92843 193 aaPredicted RBP7.86□□□□□ -1.15
SYNE2-209ENST00000553308 PMM1Q92871 262 aa7.86□□□□□ -1.15
SYNE2-209ENST00000553308 ZMYND19Q96E35 227 aaPredicted RBP7.86□□□□□ -1.15
SYNE2-209ENST00000553308 C16orf45Q96MC5 204 aaPredicted RBP7.86□□□□□ -1.15
SYNE2-209ENST00000553308 DOK1Q99704 481 aa7.86□□□□□ -1.15
SYNE2-209ENST00000553308 MECRQ9BV79 373 aa7.86□□□□□ -1.15
SYNE2-209ENST00000553308 SF3B5Q9BWJ5 86 aaKnown RBP7.86□□□□□ -1.15
SYNE2-209ENST00000553308 SAP130Q9H0E3 1048 aa7.86□□□□□ -1.15
SYNE2-209ENST00000553308 TPK1Q9H3S4 243 aa7.86□□□□□ -1.15
SYNE2-209ENST00000553308 ZNF442Q9H7R0 627 aa7.86□□□□□ -1.15
SYNE2-209ENST00000553308 DYNLRB1Q9NP97 96 aa7.86□□□□□ -1.15
SYNE2-209ENST00000553308 POLE3Q9NRF9 147 aa7.86□□□□□ -1.15
SYNE2-209ENST00000553308 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.86□□□□□ -1.15
SYNE2-209ENST00000553308 MID2Q9UJV3 735 aa7.86□□□□□ -1.15
SYNE2-209ENST00000553308 PCDHB14Q9Y5E9 798 aa7.86□□□□□ -1.15
SYNE2-209ENST00000553308 AQP7P3A6NL99 342 aa7.85□□□□□ -1.15
SYNE2-209ENST00000553308 B4DSR2 109 aa7.85□□□□□ -1.15
SYNE2-209ENST00000553308 RNASET2O00584 256 aaKnown RBP7.85□□□□□ -1.15
SYNE2-209ENST00000553308 NPHS1O60500 1241 aa7.85□□□□□ -1.15
SYNE2-209ENST00000553308 UPK3AO75631 287 aa7.85□□□□□ -1.15
SYNE2-209ENST00000553308 IGKV3-15P01624 115 aa7.85□□□□□ -1.15
SYNE2-209ENST00000553308 C1QCP02747 245 aa7.85□□□□□ -1.15
SYNE2-209ENST00000553308 GPIP06744 558 aa7.85□□□□□ -1.15
SYNE2-209ENST00000553308 GUSBP08236 651 aa7.85□□□□□ -1.15
SYNE2-209ENST00000553308 KRT4P19013 534 aa7.85□□□□□ -1.15
SYNE2-209ENST00000553308 NPR2P20594 1047 aa7.85□□□□□ -1.15
SYNE2-209ENST00000553308 PCMT1P22061 227 aa7.85□□□□□ -1.15
SYNE2-209ENST00000553308 KHKP50053 298 aa7.85□□□□□ -1.15
SYNE2-209ENST00000553308 P2RY4P51582 365 aa7.85□□□□□ -1.15
SYNE2-209ENST00000553308 IL1RL1Q01638 556 aa7.85□□□□□ -1.15
SYNE2-209ENST00000553308 C3orf36Q3SXR2 165 aa7.85□□□□□ -1.15
SYNE2-209ENST00000553308 GPAT3Q53EU6 434 aa7.85□□□□□ -1.15
SYNE2-209ENST00000553308 NIPAL3Q6P499 406 aa7.85□□□□□ -1.15
SYNE2-209ENST00000553308 THSD4Q6ZMP0 1018 aa7.85□□□□□ -1.15
SYNE2-209ENST00000553308 DEF8Q6ZN54 512 aa7.85□□□□□ -1.15
SYNE2-209ENST00000553308 ZCCHC23Q6ZST2 131 aa7.85□□□□□ -1.15
SYNE2-209ENST00000553308 GLCCI1Q86VQ1 547 aa7.85□□□□□ -1.15
SYNE2-209ENST00000553308 CARM1Q86X55 608 aa7.85□□□□□ -1.15
SYNE2-209ENST00000553308 CNPY4Q8N129 248 aa7.85□□□□□ -1.15
SYNE2-209ENST00000553308 SGMS2Q8NHU3 365 aa7.85□□□□□ -1.15
SYNE2-209ENST00000553308 EPS8L3Q8TE67 593 aaKnown RBP7.85□□□□□ -1.15
SYNE2-209ENST00000553308 CKAP2Q8WWK9 683 aa7.85□□□□□ -1.15
SYNE2-209ENST00000553308 NARFLQ9H6Q4 476 aa7.85□□□□□ -1.15
SYNE2-209ENST00000553308 LPAR2Q9HBW0 351 aa7.85□□□□□ -1.15
SYNE2-209ENST00000553308 ADPRHL2Q9NX46 363 aa7.85□□□□□ -1.15
SYNE2-209ENST00000553308 IGHV2OR16-5A0A0B4J2B6 119 aa7.84□□□□□ -1.15
SYNE2-209ENST00000553308 TMEM89A2RUT3 159 aa7.84□□□□□ -1.15
SYNE2-209ENST00000553308 ZNF503-AS2A6NEH8 195 aa7.84□□□□□ -1.15
SYNE2-209ENST00000553308 OR6C65A6NJZ3 312 aa7.84□□□□□ -1.15
SYNE2-209ENST00000553308 FAM157AC9JC47 383 aa7.84□□□□□ -1.15
SYNE2-209ENST00000553308 FRS3O43559 492 aa7.84□□□□□ -1.15
SYNE2-209ENST00000553308 SCN2BO60939 215 aa7.84□□□□□ -1.15
SYNE2-209ENST00000553308 AGR2O95994 175 aa7.84□□□□□ -1.15
SYNE2-209ENST00000553308 CHRM4P08173 479 aa7.84□□□□□ -1.15
SYNE2-209ENST00000553308 ADRA2AP08913 450 aa7.84□□□□□ -1.15
SYNE2-209ENST00000553308 UQCRC2P22695 453 aa7.84□□□□□ -1.15
SYNE2-209ENST00000553308 CLDN8P56748 225 aa7.84□□□□□ -1.15
SYNE2-209ENST00000553308 HPCAP84074 193 aa7.84□□□□□ -1.15
SYNE2-209ENST00000553308 ROR2Q01974 943 aaKnown RBP7.84□□□□□ -1.15
SYNE2-209ENST00000553308 EPS8Q12929 822 aa7.84□□□□□ -1.15
SYNE2-209ENST00000553308 NPRL3Q12980 569 aa7.84□□□□□ -1.15
SYNE2-209ENST00000553308 BNIP2Q12982 314 aa7.84□□□□□ -1.15
SYNE2-209ENST00000553308 SNTB2Q13425 540 aaKnown RBP7.84□□□□□ -1.15
SYNE2-209ENST00000553308 MSMPQ1L6U9 139 aa7.84□□□□□ -1.15
SYNE2-209ENST00000553308 MRPL2Q5T653 305 aaKnown RBP7.84□□□□□ -1.15
SYNE2-209ENST00000553308 SAXO2Q658L1 398 aa7.84□□□□□ -1.15
SYNE2-209ENST00000553308 TMEM225Q6GV28 225 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms