RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 LIPT2A6NK58 231 aa18.77■□□□□ 0.6
SMARCD1-212ENST00000551966 CPSF4O95639 269 aaKnown RBP18.77■□□□□ 0.6
SMARCD1-212ENST00000551966 CECR9P0C854 216 aa18.77■□□□□ 0.6
SMARCD1-212ENST00000551966 UQCRC2P22695 453 aa18.77■□□□□ 0.6
SMARCD1-212ENST00000551966 APEX1P27695 318 aaKnown RBP18.77■□□□□ 0.6
SMARCD1-212ENST00000551966 SLC1A3P43003 542 aa18.77■□□□□ 0.6
SMARCD1-212ENST00000551966 ANKRD46Q86W74 232 aa18.77■□□□□ 0.6
SMARCD1-212ENST00000551966 KCNS3Q9BQ31 491 aa18.77■□□□□ 0.6
SMARCD1-212ENST00000551966 ADAM19Q9H013 955 aa18.77■□□□□ 0.6
SMARCD1-212ENST00000551966 AQP7P3A6NL99 342 aa18.76■□□□□ 0.59
SMARCD1-212ENST00000551966 IGLV1-44P01699 117 aa18.76■□□□□ 0.59
SMARCD1-212ENST00000551966 THBS4P35443 961 aa18.76■□□□□ 0.59
SMARCD1-212ENST00000551966 SELENOPP49908 381 aa18.76■□□□□ 0.59
SMARCD1-212ENST00000551966 P2RY4P51582 365 aa18.76■□□□□ 0.59
SMARCD1-212ENST00000551966 CDH15P55291 814 aa18.76■□□□□ 0.59
SMARCD1-212ENST00000551966 RIN1Q13671 783 aa18.76■□□□□ 0.59
SMARCD1-212ENST00000551966 OR7A5Q15622 319 aa18.76■□□□□ 0.59
SMARCD1-212ENST00000551966 TRIP10Q15642 601 aa18.76■□□□□ 0.59
SMARCD1-212ENST00000551966 GPAT3Q53EU6 434 aa18.76■□□□□ 0.59
SMARCD1-212ENST00000551966 MYPOPQ86VE0 399 aaPredicted RBP18.76■□□□□ 0.59
SMARCD1-212ENST00000551966 ZNF786Q8N393 782 aa18.76■□□□□ 0.59
SMARCD1-212ENST00000551966 OR8J2Q8NGG1 315 aa18.76■□□□□ 0.59
SMARCD1-212ENST00000551966 SNX18Q96RF0 628 aa18.76■□□□□ 0.59
SMARCD1-212ENST00000551966 RHOXF2Q9BQY4 288 aa18.76■□□□□ 0.59
SMARCD1-212ENST00000551966 NELFAQ9H3P2 528 aa18.76■□□□□ 0.59
SMARCD1-212ENST00000551966 ASIC5Q9NY37 505 aa18.76■□□□□ 0.59
SMARCD1-212ENST00000551966 A0A096LPE4 126 aa18.75■□□□□ 0.59
SMARCD1-212ENST00000551966 ARPC4-TTLL3A0A0A6YYG9 625 aa18.75■□□□□ 0.59
SMARCD1-212ENST00000551966 A0A1W2PPZ6 126 aa18.75■□□□□ 0.59
SMARCD1-212ENST00000551966 HMGN4O00479 90 aa18.75■□□□□ 0.59
SMARCD1-212ENST00000551966 FAAHO00519 579 aa18.75■□□□□ 0.59
SMARCD1-212ENST00000551966 SPRY1O43609 319 aaPredicted RBP18.75■□□□□ 0.59
SMARCD1-212ENST00000551966 MAP2K6P52564 334 aa18.75■□□□□ 0.59
SMARCD1-212ENST00000551966 SYPL1Q16563 259 aa18.75■□□□□ 0.59
SMARCD1-212ENST00000551966 C3orf36Q3SXR2 165 aa18.75■□□□□ 0.59
SMARCD1-212ENST00000551966 ABHD12BQ7Z5M8 362 aaPredicted RBP18.75■□□□□ 0.59
SMARCD1-212ENST00000551966 GPAT4Q86UL3 456 aa18.75■□□□□ 0.59
SMARCD1-212ENST00000551966 ANKFN1Q8N957 763 aa18.75■□□□□ 0.59
SMARCD1-212ENST00000551966 NEU4Q8WWR8 484 aaPredicted RBP18.75■□□□□ 0.59
SMARCD1-212ENST00000551966 NEURL3Q96EH8 262 aa18.75■□□□□ 0.59
SMARCD1-212ENST00000551966 SLC38A1Q9H2H9 487 aa18.75■□□□□ 0.59
SMARCD1-212ENST00000551966 PIF1Q9H611 641 aa18.75■□□□□ 0.59
SMARCD1-212ENST00000551966 MKS1Q9NXB0 559 aa18.75■□□□□ 0.59
SMARCD1-212ENST00000551966 DYSFO75923 2080 aa18.74■□□□□ 0.59
SMARCD1-212ENST00000551966 PRSS51A0A1B0GVH4 220 aa18.74■□□□□ 0.59
SMARCD1-212ENST00000551966 AGAP5A6NIR3 686 aa18.74■□□□□ 0.59
SMARCD1-212ENST00000551966 LYNX1G3V0Z9 82 aa18.74■□□□□ 0.59
SMARCD1-212ENST00000551966 hCG_2039718K7EN88 272 aa18.74■□□□□ 0.59
SMARCD1-212ENST00000551966 UPK3AO75631 287 aa18.74■□□□□ 0.59
SMARCD1-212ENST00000551966 KRT33AO76009 404 aa18.74■□□□□ 0.59
SMARCD1-212ENST00000551966 GPIP06744 558 aa18.74■□□□□ 0.59
SMARCD1-212ENST00000551966 CELA3BP08861 270 aa18.74■□□□□ 0.59
SMARCD1-212ENST00000551966 LYNX1P0DP58 116 aa18.74■□□□□ 0.59
SMARCD1-212ENST00000551966 UBE2NP61088 152 aaKnown RBP18.74■□□□□ 0.59
SMARCD1-212ENST00000551966 EPS8Q12929 822 aa18.74■□□□□ 0.59
SMARCD1-212ENST00000551966 TMEM225Q6GV28 225 aa18.74■□□□□ 0.59
SMARCD1-212ENST00000551966 CREB3L2Q70SY1 520 aa18.74■□□□□ 0.59
SMARCD1-212ENST00000551966 EPHX4Q8IUS5 362 aa18.74■□□□□ 0.59
SMARCD1-212ENST00000551966 CMIPQ8IY22 773 aa18.74■□□□□ 0.59
SMARCD1-212ENST00000551966 SVOPLQ8N434 492 aa18.74■□□□□ 0.59
SMARCD1-212ENST00000551966 NUP37Q8NFH4 326 aa18.74■□□□□ 0.59
SMARCD1-212ENST00000551966 OR4F15Q8NGB8 312 aa18.74■□□□□ 0.59
SMARCD1-212ENST00000551966 MAGEE2Q8TD90 523 aaPredicted RBP18.74■□□□□ 0.59
SMARCD1-212ENST00000551966 UBLCP1Q8WVY7 318 aaPredicted RBP18.74■□□□□ 0.59
SMARCD1-212ENST00000551966 APOPT1Q96IL0 206 aa18.74■□□□□ 0.59
SMARCD1-212ENST00000551966 PPCSQ9HAB8 311 aa18.74■□□□□ 0.59
SMARCD1-212ENST00000551966 NOP53Q9NZM5 478 aaKnown RBP18.74■□□□□ 0.59
SMARCD1-212ENST00000551966 METRNQ9UJH8 293 aa18.74■□□□□ 0.59
SMARCD1-212ENST00000551966 SH3PXD2BA1X283 911 aa18.73■□□□□ 0.59
SMARCD1-212ENST00000551966 ZNF587BE7ETH6 402 aa18.73■□□□□ 0.59
SMARCD1-212ENST00000551966 SNUPNO95149 360 aaKnown RBP18.73■□□□□ 0.59
SMARCD1-212ENST00000551966 IGKV3-15P01624 115 aa18.73■□□□□ 0.59
SMARCD1-212ENST00000551966 CHRM4P08173 479 aa18.73■□□□□ 0.59
SMARCD1-212ENST00000551966 EGR1P18146 543 aa18.73■□□□□ 0.59
SMARCD1-212ENST00000551966 NPR2P20594 1047 aa18.73■□□□□ 0.59
SMARCD1-212ENST00000551966 PAX7P23759 505 aa18.73■□□□□ 0.59
SMARCD1-212ENST00000551966 DVL1P1P54792 670 aaPredicted RBP18.73■□□□□ 0.59
SMARCD1-212ENST00000551966 BNIP2Q12982 314 aa18.73■□□□□ 0.59
SMARCD1-212ENST00000551966 MAD2L1Q13257 205 aaPredicted RBP18.73■□□□□ 0.59
SMARCD1-212ENST00000551966 FAM174BQ3ZCQ3 159 aa18.73■□□□□ 0.59
SMARCD1-212ENST00000551966 FAM169BQ8N8A8 192 aa18.73■□□□□ 0.59
SMARCD1-212ENST00000551966 SEMA6DQ8NFY4 1073 aa18.73■□□□□ 0.59
SMARCD1-212ENST00000551966 UBASH3BQ8TF42 649 aa18.73■□□□□ 0.59
SMARCD1-212ENST00000551966 ALKBH3Q96Q83 286 aaPredicted RBP18.73■□□□□ 0.59
SMARCD1-212ENST00000551966 OCEL1Q9H607 264 aa18.73■□□□□ 0.59
SMARCD1-212ENST00000551966 ZNF442Q9H7R0 627 aa18.73■□□□□ 0.59
SMARCD1-212ENST00000551966 TENM1Q9UKZ4 2725 aa18.73■□□□□ 0.59
SMARCD1-212ENST00000551966 CFAP73A6NFT4 308 aa18.72■□□□□ 0.59
SMARCD1-212ENST00000551966 TMEM229AB2RXF0 380 aa18.72■□□□□ 0.59
SMARCD1-212ENST00000551966 KHKP50053 298 aa18.72■□□□□ 0.59
SMARCD1-212ENST00000551966 CASP8Q14790 479 aa18.72■□□□□ 0.59
SMARCD1-212ENST00000551966 RINLQ6ZS11 566 aa18.72■□□□□ 0.59
SMARCD1-212ENST00000551966 SPATA21Q7Z572 469 aa18.72■□□□□ 0.59
SMARCD1-212ENST00000551966 WDR60Q8WVS4 1066 aa18.72■□□□□ 0.59
SMARCD1-212ENST00000551966 TRNT1Q96Q11 434 aaKnown RBP18.72■□□□□ 0.59
SMARCD1-212ENST00000551966 SLC35A5Q9BS91 424 aa18.72■□□□□ 0.59
SMARCD1-212ENST00000551966 AKTIPQ9H8T0 292 aa18.72■□□□□ 0.59
SMARCD1-212ENST00000551966 RLIMQ9NVW2 624 aa18.72■□□□□ 0.59
SMARCD1-212ENST00000551966 MARCOQ9UEW3 520 aaPredicted RBP18.72■□□□□ 0.59
SMARCD1-212ENST00000551966 SPAG7O75391 227 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms