RNA–Protein interactions for RNA: ENST00000550692.1

BRF1-218, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, human

TSL 4

Gene BRF1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRF1-218	ENST00000550692	PRG2	P13727	222 aa		10.02	□□□□□ -0.81
BRF1-218	ENST00000550692	POU2F1	P14859	743 aa		10.02	□□□□□ -0.81
BRF1-218	ENST00000550692	UQCRB	P14927	111 aa		10.02	□□□□□ -0.81
BRF1-218	ENST00000550692	ATP6V1B2	P21281	511 aa		10.02	□□□□□ -0.81
BRF1-218	ENST00000550692	TACR3	P29371	465 aa		10.02	□□□□□ -0.81
BRF1-218	ENST00000550692	AGTR1	P30556	359 aa		10.02	□□□□□ -0.81
BRF1-218	ENST00000550692	CCKAR	P32238	428 aa		10.02	□□□□□ -0.81
BRF1-218	ENST00000550692	DIO1	P49895	249 aa		10.02	□□□□□ -0.81
BRF1-218	ENST00000550692	ACTR3	P61158	418 aa		10.02	□□□□□ -0.81
BRF1-218	ENST00000550692	DAZAP2	Q15038	168 aa	Predicted RBP	10.02	□□□□□ -0.81
BRF1-218	ENST00000550692	EXOC3L2	Q2M3D2	409 aa		10.02	□□□□□ -0.81
BRF1-218	ENST00000550692	FAM98B	Q52LJ0	330 aa	Known RBP	10.02	□□□□□ -0.81
BRF1-218	ENST00000550692	IFI44L	Q53G44	452 aa		10.02	□□□□□ -0.81
BRF1-218	ENST00000550692	NUFIP2	Q7Z417	695 aa	Known RBP	10.02	□□□□□ -0.81
BRF1-218	ENST00000550692	SPATA24	Q86W54	205 aa		10.02	□□□□□ -0.81
BRF1-218	ENST00000550692	GPR32P1	Q8NGA4	272 aa		10.02	□□□□□ -0.81
BRF1-218	ENST00000550692	SLC25A43	Q8WUT9	341 aa	Predicted RBP	10.02	□□□□□ -0.81
BRF1-218	ENST00000550692	WFIKKN1	Q96NZ8	548 aa		10.02	□□□□□ -0.81
BRF1-218	ENST00000550692	RSPO3	Q9BXY4	272 aa	Predicted RBP	10.02	□□□□□ -0.81
BRF1-218	ENST00000550692	POLDIP3	Q9BY77	421 aa	Known RBP	10.02	□□□□□ -0.81
BRF1-218	ENST00000550692	OR11A1	Q9GZK7	315 aa		10.02	□□□□□ -0.81
BRF1-218	ENST00000550692	C12orf49	Q9H741	205 aa		10.02	□□□□□ -0.81
BRF1-218	ENST00000550692	RASSF1	Q9NS23	344 aa		10.02	□□□□□ -0.81
BRF1-218	ENST00000550692	OSGIN1	Q9UJX0	560 aa		10.02	□□□□□ -0.81
BRF1-218	ENST00000550692	ING1	Q9UK53	422 aa	Predicted RBP	10.02	□□□□□ -0.81
BRF1-218	ENST00000550692	SH3GLB1	Q9Y371	365 aa		10.02	□□□□□ -0.81
BRF1-218	ENST00000550692	FREM1	Q5H8C1	2179 aa		10.02	□□□□□ -0.81
BRF1-218	ENST00000550692	ANKRD17	O75179	2603 aa	Known RBP	10.02	□□□□□ -0.81
BRF1-218	ENST00000550692	ABCA4	P78363	2273 aa		10.02	□□□□□ -0.81
BRF1-218	ENST00000550692	TMED7-TICAM2	A0A0A6YYA0	188 aa		10.01	□□□□□ -0.81
BRF1-218	ENST00000550692	TCRBV5S2	A0A599	114 aa		10.01	□□□□□ -0.81
BRF1-218	ENST00000550692	TMEM72	A0PK05	275 aa		10.01	□□□□□ -0.81
BRF1-218	ENST00000550692	SMAD9	O15198	467 aa	Known RBP	10.01	□□□□□ -0.81
BRF1-218	ENST00000550692	GPI	P06744	558 aa		10.01	□□□□□ -0.81
BRF1-218	ENST00000550692	ITGA2	P17301	1181 aa		10.01	□□□□□ -0.81
BRF1-218	ENST00000550692	UGT2B10	P36537	528 aa		10.01	□□□□□ -0.81
BRF1-218	ENST00000550692	SLC1A3	P43003	542 aa		10.01	□□□□□ -0.81
BRF1-218	ENST00000550692	HTR3A	P46098	478 aa		10.01	□□□□□ -0.81
BRF1-218	ENST00000550692	PCYT1A	P49585	367 aa		10.01	□□□□□ -0.81
BRF1-218	ENST00000550692	POLR2H	P52434	150 aa	Known RBP	10.01	□□□□□ -0.81
BRF1-218	ENST00000550692	CHRNB3	Q05901	458 aa		10.01	□□□□□ -0.81
BRF1-218	ENST00000550692	RASGEF1B	Q0VAM2	473 aa		10.01	□□□□□ -0.81
BRF1-218	ENST00000550692	RNPS1	Q15287	305 aa	Known RBP	10.01	□□□□□ -0.81
BRF1-218	ENST00000550692	TMEM201	Q5SNT2	666 aa		10.01	□□□□□ -0.81
BRF1-218	ENST00000550692	ANKRD34A	Q69YU3	496 aa		10.01	□□□□□ -0.81
BRF1-218	ENST00000550692	C22orf34	Q6ZV56	151 aa		10.01	□□□□□ -0.81
BRF1-218	ENST00000550692	CDH24	Q86UP0	819 aa		10.01	□□□□□ -0.81
BRF1-218	ENST00000550692	SLC43A2	Q8N370	569 aa		10.01	□□□□□ -0.81
BRF1-218	ENST00000550692	GEMIN6	Q8WXD5	167 aa	Known RBP	10.01	□□□□□ -0.81
BRF1-218	ENST00000550692	ZNF775	Q96BV0	537 aa	Predicted RBP	10.01	□□□□□ -0.81
BRF1-218	ENST00000550692	HSH2D	Q96JZ2	352 aa		10.01	□□□□□ -0.81
BRF1-218	ENST00000550692	DACH2	Q96NX9	599 aa		10.01	□□□□□ -0.81
BRF1-218	ENST00000550692	PSD2	Q9BQI7	771 aa		10.01	□□□□□ -0.81
BRF1-218	ENST00000550692	TRIM2	Q9C040	744 aa		10.01	□□□□□ -0.81
BRF1-218	ENST00000550692	KLHL4	Q9C0H6	718 aa		10.01	□□□□□ -0.81
BRF1-218	ENST00000550692	ADAM19	Q9H013	955 aa		10.01	□□□□□ -0.81
BRF1-218	ENST00000550692	CLEC4M	Q9H2X3	399 aa	Predicted RBP	10.01	□□□□□ -0.81
BRF1-218	ENST00000550692	LIME1	Q9H400	295 aa		10.01	□□□□□ -0.81
BRF1-218	ENST00000550692	MAGIX	Q9H6Y5	334 aa		10.01	□□□□□ -0.81
BRF1-218	ENST00000550692	ELOVL5	Q9NYP7	299 aa		10.01	□□□□□ -0.81
BRF1-218	ENST00000550692	KLHL13	Q9P2N7	655 aa		10.01	□□□□□ -0.81
BRF1-218	ENST00000550692	NDRG3	Q9UGV2	375 aa		10.01	□□□□□ -0.81
BRF1-218	ENST00000550692	TMED7	Q9Y3B3	224 aa		10.01	□□□□□ -0.81
BRF1-218	ENST00000550692	SPIN1	Q9Y657	262 aa	Predicted RBP	10.01	□□□□□ -0.81
BRF1-218	ENST00000550692	AKAP6	Q13023	2319 aa		10.01	□□□□□ -0.81
BRF1-218	ENST00000550692	HRNR	Q86YZ3	2850 aa	Predicted RBP	10	□□□□□ -0.81
BRF1-218	ENST00000550692	TCRBV3S1	A0A5B6	114 aa		10	□□□□□ -0.81
BRF1-218	ENST00000550692	DHRS12	A0PJE2	317 aa		10	□□□□□ -0.81
BRF1-218	ENST00000550692	ZC3H12D	A2A288	527 aa	Known RBP	10	□□□□□ -0.81
BRF1-218	ENST00000550692	ANKRD65	E5RJM6	399 aa		10	□□□□□ -0.81
BRF1-218	ENST00000550692	C16orf97	H3BN30	126 aa		10	□□□□□ -0.81
BRF1-218	ENST00000550692	FRS3	O43559	492 aa		10	□□□□□ -0.81
BRF1-218	ENST00000550692	CYTIP	O60759	359 aa		10	□□□□□ -0.81
BRF1-218	ENST00000550692	FMO6P	O60774	539 aa		10	□□□□□ -0.81
BRF1-218	ENST00000550692	IFNW1	P05000	195 aa		10	□□□□□ -0.81
BRF1-218	ENST00000550692	YES1	P07947	543 aa		10	□□□□□ -0.81
BRF1-218	ENST00000550692	IFNA8	P32881	189 aa		10	□□□□□ -0.81
BRF1-218	ENST00000550692	OR1E2	P47887	323 aa		10	□□□□□ -0.81
BRF1-218	ENST00000550692	RGS8	P57771	180 aa	Predicted RBP	10	□□□□□ -0.81
BRF1-218	ENST00000550692	COPZ1	P61923	177 aa		10	□□□□□ -0.81
BRF1-218	ENST00000550692	CSNK2A1	P68400	391 aa	Predicted RBP	10	□□□□□ -0.81
BRF1-218	ENST00000550692	HOXC5	Q00444	222 aa		10	□□□□□ -0.81
BRF1-218	ENST00000550692	KPNB1	Q14974	876 aa	Known RBP	10	□□□□□ -0.81
BRF1-218	ENST00000550692	POU4F3	Q15319	338 aa		10	□□□□□ -0.81
BRF1-218	ENST00000550692	NRF1	Q16656	503 aa		10	□□□□□ -0.81
BRF1-218	ENST00000550692	VTCN1	Q7Z7D3	282 aa		10	□□□□□ -0.81
BRF1-218	ENST00000550692	COMTD1	Q86VU5	262 aa		10	□□□□□ -0.81
BRF1-218	ENST00000550692	RANBP3L	Q86VV4	465 aa	Predicted RBP	10	□□□□□ -0.81
BRF1-218	ENST00000550692	CARM1	Q86X55	608 aa		10	□□□□□ -0.81
BRF1-218	ENST00000550692	CDC20B	Q86Y33	519 aa		10	□□□□□ -0.81
BRF1-218	ENST00000550692	CADM2	Q8N3J6	435 aa		10	□□□□□ -0.81
BRF1-218	ENST00000550692	RSRC1	Q96IZ7	334 aa	Known RBP	10	□□□□□ -0.81
BRF1-218	ENST00000550692	ZNF300	Q96RE9	604 aa	Predicted RBP	10	□□□□□ -0.81
BRF1-218	ENST00000550692	SEPHS2	Q99611	448 aa		10	□□□□□ -0.81
BRF1-218	ENST00000550692	ARHGDIG	Q99819	225 aa		10	□□□□□ -0.81
BRF1-218	ENST00000550692	DENND2D	Q9H6A0	471 aa	Predicted RBP	10	□□□□□ -0.81
BRF1-218	ENST00000550692	YY1AP1	Q9H869	796 aa		10	□□□□□ -0.81
BRF1-218	ENST00000550692	BCO1	Q9HAY6	547 aa		10	□□□□□ -0.81
BRF1-218	ENST00000550692	GP6	Q9HCN6	339 aa		10	□□□□□ -0.81
BRF1-218	ENST00000550692	IL1RAP	Q9NPH3	570 aa		10	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms