RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 PAK1IP1Q9NWT1 392 aaPredicted RBP11.42□□□□□ -0.58
CACNB3-217ENST00000550483 CHCHD3Q9NX63 227 aaKnown RBP11.42□□□□□ -0.58
CACNB3-217ENST00000550483 ERVK-18Q9QC07 812 aa11.42□□□□□ -0.58
CACNB3-217ENST00000550483 RSL24D1Q9UHA3 163 aaKnown RBP11.42□□□□□ -0.58
CACNB3-217ENST00000550483 NINQ8N4C6 2090 aa11.41□□□□□ -0.58
CACNB3-217ENST00000550483 LOC101059948A0A1B0GTJ6 334 aa11.41□□□□□ -0.58
CACNB3-217ENST00000550483 SLC22A31A6NKX4 558 aa11.41□□□□□ -0.58
CACNB3-217ENST00000550483 NPIPB7O75200 414 aa11.41□□□□□ -0.58
CACNB3-217ENST00000550483 FADS2O95864 444 aaKnown RBP11.41□□□□□ -0.58
CACNB3-217ENST00000550483 P04436 131 aa11.41□□□□□ -0.58
CACNB3-217ENST00000550483 TSPAN19P0C672 248 aa11.41□□□□□ -0.58
CACNB3-217ENST00000550483 PCMT1P22061 227 aa11.41□□□□□ -0.58
CACNB3-217ENST00000550483 HTR1FP30939 366 aa11.41□□□□□ -0.58
CACNB3-217ENST00000550483 CAPZA2P47755 286 aa11.41□□□□□ -0.58
CACNB3-217ENST00000550483 TMBIM6P55061 237 aa11.41□□□□□ -0.58
CACNB3-217ENST00000550483 CDH11P55287 796 aa11.41□□□□□ -0.58
CACNB3-217ENST00000550483 EMX1Q04741 257 aaPredicted RBP11.41□□□□□ -0.58
CACNB3-217ENST00000550483 ST3GAL4Q11206 333 aa11.41□□□□□ -0.58
CACNB3-217ENST00000550483 POU4F2Q12837 409 aa11.41□□□□□ -0.58
CACNB3-217ENST00000550483 RAB39AQ14964 217 aa11.41□□□□□ -0.58
CACNB3-217ENST00000550483 NEDD8Q15843 81 aa11.41□□□□□ -0.58
CACNB3-217ENST00000550483 GLYR1Q49A26 553 aaPredicted RBP11.41□□□□□ -0.58
CACNB3-217ENST00000550483 CRTC2Q53ET0 693 aaPredicted RBP11.41□□□□□ -0.58
CACNB3-217ENST00000550483 SYT6Q5T7P8 510 aaPredicted RBP11.41□□□□□ -0.58
CACNB3-217ENST00000550483 AADACL4Q5VUY2 407 aa11.41□□□□□ -0.58
CACNB3-217ENST00000550483 UBE2UQ5VVX9 321 aa11.41□□□□□ -0.58
CACNB3-217ENST00000550483 GPR139Q6DWJ6 353 aa11.41□□□□□ -0.58
CACNB3-217ENST00000550483 GTF2IRD2BQ6EKJ0 949 aa11.41□□□□□ -0.58
CACNB3-217ENST00000550483 XAF1Q6GPH4 301 aa11.41□□□□□ -0.58
CACNB3-217ENST00000550483 DESI1Q6ICB0 168 aa11.41□□□□□ -0.58
CACNB3-217ENST00000550483 IL20RBQ6UXL0 311 aa11.41□□□□□ -0.58
CACNB3-217ENST00000550483 ZNF367Q7RTV3 350 aa11.41□□□□□ -0.58
CACNB3-217ENST00000550483 NANOGNBQ7Z5D8 188 aa11.41□□□□□ -0.58
CACNB3-217ENST00000550483 GTF2IRD2Q86UP8 949 aa11.41□□□□□ -0.58
CACNB3-217ENST00000550483 C10orf53Q8N6V4 93 aa11.41□□□□□ -0.58
CACNB3-217ENST00000550483 SCAIQ8N9R8 606 aa11.41□□□□□ -0.58
CACNB3-217ENST00000550483 OR2M3Q8NG83 312 aa11.41□□□□□ -0.58
CACNB3-217ENST00000550483 OR51A7Q8NH64 312 aa11.41□□□□□ -0.58
CACNB3-217ENST00000550483 TNFRSF13CQ96RJ3 184 aa11.41□□□□□ -0.58
CACNB3-217ENST00000550483 ASPNQ9BXN1 380 aa11.41□□□□□ -0.58
CACNB3-217ENST00000550483 RBM38Q9H0Z9 239 aaKnown RBP11.41□□□□□ -0.58
CACNB3-217ENST00000550483 ACOT13Q9NPJ3 140 aa11.41□□□□□ -0.58
CACNB3-217ENST00000550483 NRIP3Q9NQ35 241 aa11.41□□□□□ -0.58
CACNB3-217ENST00000550483 CHRNA9Q9UGM1 479 aa11.41□□□□□ -0.58
CACNB3-217ENST00000550483 WARS2Q9UGM6 360 aaKnown RBP11.41□□□□□ -0.58
CACNB3-217ENST00000550483 DIMT1Q9UNQ2 313 aaKnown RBP11.41□□□□□ -0.58
CACNB3-217ENST00000550483 EXOSC1Q9Y3B2 195 aaKnown RBP11.41□□□□□ -0.58
CACNB3-217ENST00000550483 MSRB2Q9Y3D2 182 aa11.41□□□□□ -0.58
CACNB3-217ENST00000550483 TRAV27A0A087WT01 109 aa11.4□□□□□ -0.58
CACNB3-217ENST00000550483 CCDC160A6NGH7 325 aa11.4□□□□□ -0.58
CACNB3-217ENST00000550483 PRR23D1E9PI22 279 aaPredicted RBP11.4□□□□□ -0.58
CACNB3-217ENST00000550483 GNB5O14775 395 aa11.4□□□□□ -0.58
CACNB3-217ENST00000550483 SNPHO15079 494 aa11.4□□□□□ -0.58
CACNB3-217ENST00000550483 FZD7O75084 574 aa11.4□□□□□ -0.58
CACNB3-217ENST00000550483 TRMUO75648 421 aaKnown RBP11.4□□□□□ -0.58
CACNB3-217ENST00000550483 NTN1O95631 604 aa11.4□□□□□ -0.58
CACNB3-217ENST00000550483 RAB36O95755 333 aa11.4□□□□□ -0.58
CACNB3-217ENST00000550483 MT-ND2P03891 347 aa11.4□□□□□ -0.58
CACNB3-217ENST00000550483 PRR23D2P0DMB1 279 aaPredicted RBP11.4□□□□□ -0.58
CACNB3-217ENST00000550483 MYL12AP19105 171 aa11.4□□□□□ -0.58
CACNB3-217ENST00000550483 UQCRC1P31930 480 aa11.4□□□□□ -0.58
CACNB3-217ENST00000550483 RPL4P36578 427 aaKnown RBP11.4□□□□□ -0.58
CACNB3-217ENST00000550483 MTNR1AP48039 350 aa11.4□□□□□ -0.58
CACNB3-217ENST00000550483 CYB561P49447 251 aa11.4□□□□□ -0.58
CACNB3-217ENST00000550483 FXYD6P3P58550 94 aa11.4□□□□□ -0.58
CACNB3-217ENST00000550483 EGR4Q05215 589 aa11.4□□□□□ -0.58
CACNB3-217ENST00000550483 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.4□□□□□ -0.58
CACNB3-217ENST00000550483 LGALS3BPQ08380 585 aa11.4□□□□□ -0.58
CACNB3-217ENST00000550483 SELENBP1Q13228 472 aa11.4□□□□□ -0.58
CACNB3-217ENST00000550483 PMS2P3Q13401 168 aa11.4□□□□□ -0.58
CACNB3-217ENST00000550483 IL10RAQ13651 578 aa11.4□□□□□ -0.58
CACNB3-217ENST00000550483 C1DQ13901 141 aaKnown RBP11.4□□□□□ -0.58
CACNB3-217ENST00000550483 IRF3Q14653 427 aa11.4□□□□□ -0.58
CACNB3-217ENST00000550483 SGCBQ16585 318 aa11.4□□□□□ -0.58
CACNB3-217ENST00000550483 PLPPR5Q32ZL2 321 aa11.4□□□□□ -0.58
CACNB3-217ENST00000550483 ACER2Q5QJU3 275 aa11.4□□□□□ -0.58
CACNB3-217ENST00000550483 DCAF10Q5QP82 559 aa11.4□□□□□ -0.58
CACNB3-217ENST00000550483 LCN1P1Q5VSP4 162 aa11.4□□□□□ -0.58
CACNB3-217ENST00000550483 C1orf140Q5VVS0 124 aa11.4□□□□□ -0.58
CACNB3-217ENST00000550483 C3orf33Q6P1S2 294 aa11.4□□□□□ -0.58
CACNB3-217ENST00000550483 CCDC81Q6ZN84 652 aa11.4□□□□□ -0.58
CACNB3-217ENST00000550483 CXXC5Q7LFL8 322 aaKnown RBP11.4□□□□□ -0.58
CACNB3-217ENST00000550483 ADGRG3Q86Y34 549 aa11.4□□□□□ -0.58
CACNB3-217ENST00000550483 CLEC1AQ8NC01 280 aa11.4□□□□□ -0.58
CACNB3-217ENST00000550483 RAB2BQ8WUD1 216 aa11.4□□□□□ -0.58
CACNB3-217ENST00000550483 FAR1Q8WVX9 515 aa11.4□□□□□ -0.58
CACNB3-217ENST00000550483 C1GALT1C1Q96EU7 318 aa11.4□□□□□ -0.58
CACNB3-217ENST00000550483 SNX18Q96RF0 628 aa11.4□□□□□ -0.58
CACNB3-217ENST00000550483 MND1Q9BWT6 205 aa11.4□□□□□ -0.58
CACNB3-217ENST00000550483 JAM3Q9BX67 310 aa11.4□□□□□ -0.58
CACNB3-217ENST00000550483 LHPPQ9H008 270 aa11.4□□□□□ -0.58
CACNB3-217ENST00000550483 GALNT9Q9HCQ5 603 aa11.4□□□□□ -0.58
CACNB3-217ENST00000550483 FGF20Q9NP95 211 aaPredicted RBP11.4□□□□□ -0.58
CACNB3-217ENST00000550483 TIMMDC1Q9NPL8 285 aa11.4□□□□□ -0.58
CACNB3-217ENST00000550483 ASCL3Q9NQ33 180 aa11.4□□□□□ -0.58
CACNB3-217ENST00000550483 INPP5EQ9NRR6 644 aa11.4□□□□□ -0.58
CACNB3-217ENST00000550483 GPR83Q9NYM4 423 aa11.4□□□□□ -0.58
CACNB3-217ENST00000550483 DNAJC27Q9NZQ0 273 aa11.4□□□□□ -0.58
CACNB3-217ENST00000550483 ERGIC3Q9Y282 383 aa11.4□□□□□ -0.58
CACNB3-217ENST00000550483 HECTD1Q9ULT8 2610 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms