RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 WDR31Q8NA23 367 aa6.68□□□□□ -1.34
NEK3-201ENST00000550331 PROX1Q92786 737 aa6.68□□□□□ -1.34
NEK3-201ENST00000550331 PMM1Q92871 262 aa6.68□□□□□ -1.34
NEK3-201ENST00000550331 TMEM45BQ96B21 275 aa6.68□□□□□ -1.34
NEK3-201ENST00000550331 DDIT4LQ96D03 193 aa6.68□□□□□ -1.34
NEK3-201ENST00000550331 ZG16BQ96DA0 208 aa6.68□□□□□ -1.34
NEK3-201ENST00000550331 BOD1Q96IK1 185 aa6.68□□□□□ -1.34
NEK3-201ENST00000550331 CCDC115Q96NT0 180 aa6.68□□□□□ -1.34
NEK3-201ENST00000550331 TRNT1Q96Q11 434 aaKnown RBP6.68□□□□□ -1.34
NEK3-201ENST00000550331 SLC35A5Q9BS91 424 aa6.68□□□□□ -1.34
NEK3-201ENST00000550331 NAA11Q9BSU3 229 aaPredicted RBP6.68□□□□□ -1.34
NEK3-201ENST00000550331 C19orf24Q9BVV8 132 aa6.68□□□□□ -1.34
NEK3-201ENST00000550331 OR11A1Q9GZK7 315 aa6.68□□□□□ -1.34
NEK3-201ENST00000550331 PIF1Q9H611 641 aa6.68□□□□□ -1.34
NEK3-201ENST00000550331 FKRPQ9H9S5 495 aa6.68□□□□□ -1.34
NEK3-201ENST00000550331 LPAR3Q9UBY5 353 aa6.68□□□□□ -1.34
NEK3-201ENST00000550331 MARCOQ9UEW3 520 aaPredicted RBP6.68□□□□□ -1.34
NEK3-201ENST00000550331 BTNL2Q9UIR0 455 aa6.68□□□□□ -1.34
NEK3-201ENST00000550331 CDC42EP3Q9UKI2 254 aa6.68□□□□□ -1.34
NEK3-201ENST00000550331 PRDM4Q9UKN5 801 aa6.68□□□□□ -1.34
NEK3-201ENST00000550331 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.68□□□□□ -1.34
NEK3-201ENST00000550331 TMED7Q9Y3B3 224 aa6.68□□□□□ -1.34
NEK3-201ENST00000550331 RAP2CQ9Y3L5 183 aa6.68□□□□□ -1.34
NEK3-201ENST00000550331 FLVCR1Q9Y5Y0 555 aa6.68□□□□□ -1.34
NEK3-201ENST00000550331 A0A1W2PR80 420 aa6.67□□□□□ -1.34
NEK3-201ENST00000550331 PRAMEF27A3QJZ7 478 aa6.67□□□□□ -1.34
NEK3-201ENST00000550331 CLDN24A6NM45 220 aa6.67□□□□□ -1.34
NEK3-201ENST00000550331 DBX1A6NMT0 343 aa6.67□□□□□ -1.34
NEK3-201ENST00000550331 HMGN4O00479 90 aa6.67□□□□□ -1.34
NEK3-201ENST00000550331 ITM2AO43736 263 aa6.67□□□□□ -1.34
NEK3-201ENST00000550331 CPSF4O95639 269 aaKnown RBP6.67□□□□□ -1.34
NEK3-201ENST00000550331 IMPDH2P12268 514 aa6.67□□□□□ -1.34
NEK3-201ENST00000550331 UQCRBP14927 111 aa6.67□□□□□ -1.34
NEK3-201ENST00000550331 CREB1P16220 341 aa6.67□□□□□ -1.34
NEK3-201ENST00000550331 LBPP18428 481 aa6.67□□□□□ -1.34
NEK3-201ENST00000550331 PTNP21246 168 aa6.67□□□□□ -1.34
NEK3-201ENST00000550331 RPS4Y1P22090 263 aaKnown RBP6.67□□□□□ -1.34
NEK3-201ENST00000550331 PAX7P23759 505 aa6.67□□□□□ -1.34
NEK3-201ENST00000550331 TACR3P29371 465 aa6.67□□□□□ -1.34
NEK3-201ENST00000550331 MPGP29372 298 aa6.67□□□□□ -1.34
NEK3-201ENST00000550331 S100A3P33764 101 aa6.67□□□□□ -1.34
NEK3-201ENST00000550331 SLC1A3P43003 542 aa6.67□□□□□ -1.34
NEK3-201ENST00000550331 RPL14P50914 215 aaKnown RBP6.67□□□□□ -1.34
NEK3-201ENST00000550331 FABP6P51161 128 aa6.67□□□□□ -1.34
NEK3-201ENST00000550331 EFNA4P52798 201 aa6.67□□□□□ -1.34
NEK3-201ENST00000550331 PRPS1P60891 318 aa6.67□□□□□ -1.34
NEK3-201ENST00000550331 ABCE1P61221 599 aaKnown RBP6.67□□□□□ -1.34
NEK3-201ENST00000550331 VSNL1P62760 191 aa6.67□□□□□ -1.34
NEK3-201ENST00000550331 CHRNB3Q05901 458 aa6.67□□□□□ -1.34
NEK3-201ENST00000550331 LRRC74AQ0VAA2 488 aa6.67□□□□□ -1.34
NEK3-201ENST00000550331 SLC17A1Q14916 467 aa6.67□□□□□ -1.34
NEK3-201ENST00000550331 CHI3L2Q15782 390 aa6.67□□□□□ -1.34
NEK3-201ENST00000550331 GSTA3Q16772 222 aa6.67□□□□□ -1.34
NEK3-201ENST00000550331 FAM174BQ3ZCQ3 159 aa6.67□□□□□ -1.34
NEK3-201ENST00000550331 TSPO2Q5TGU0 170 aa6.67□□□□□ -1.34
NEK3-201ENST00000550331 LRRC74BQ6ZQY2 392 aa6.67□□□□□ -1.34
NEK3-201ENST00000550331 CCDC103Q8IW40 242 aa6.67□□□□□ -1.34
NEK3-201ENST00000550331 ZNF525Q8N782 197 aa6.67□□□□□ -1.34
NEK3-201ENST00000550331 ANKFN1Q8N957 763 aa6.67□□□□□ -1.34
NEK3-201ENST00000550331 OR52E4Q8NGH9 312 aa6.67□□□□□ -1.34
NEK3-201ENST00000550331 C10orf105Q8TEF2 133 aa6.67□□□□□ -1.34
NEK3-201ENST00000550331 FAM168AQ92567 244 aa6.67□□□□□ -1.34
NEK3-201ENST00000550331 CNOT9Q92600 299 aaKnown RBP6.67□□□□□ -1.34
NEK3-201ENST00000550331 PKNOX2Q96KN3 472 aa6.67□□□□□ -1.34
NEK3-201ENST00000550331 PPP1R36Q96LQ0 422 aa6.67□□□□□ -1.34
NEK3-201ENST00000550331 PANX1Q96RD7 426 aa6.67□□□□□ -1.34
NEK3-201ENST00000550331 TMEM109Q9BVC6 243 aa6.67□□□□□ -1.34
NEK3-201ENST00000550331 SF3B5Q9BWJ5 86 aaKnown RBP6.67□□□□□ -1.34
NEK3-201ENST00000550331 SLC38A1Q9H2H9 487 aa6.67□□□□□ -1.34
NEK3-201ENST00000550331 MTHFD2LQ9H903 347 aaPredicted RBP6.67□□□□□ -1.34
NEK3-201ENST00000550331 SSU72Q9NP77 194 aaKnown RBP6.67□□□□□ -1.34
NEK3-201ENST00000550331 SLC17A5Q9NRA2 495 aa6.67□□□□□ -1.34
NEK3-201ENST00000550331 SLC7A10Q9NS82 523 aa6.67□□□□□ -1.34
NEK3-201ENST00000550331 UPB1Q9UBR1 384 aa6.67□□□□□ -1.34
NEK3-201ENST00000550331 HAO1Q9UJM8 370 aa6.67□□□□□ -1.34
NEK3-201ENST00000550331 OSGIN1Q9UJX0 560 aa6.67□□□□□ -1.34
NEK3-201ENST00000550331 SVEP1Q4LDE5 3571 aa6.67□□□□□ -1.34
NEK3-201ENST00000550331 TMEM72A0PK05 275 aa6.66□□□□□ -1.34
NEK3-201ENST00000550331 WDR91A4D1P6 747 aa6.66□□□□□ -1.34
NEK3-201ENST00000550331 CFAP73A6NFT4 308 aa6.66□□□□□ -1.34
NEK3-201ENST00000550331 CCDC154A6NI56 674 aa6.66□□□□□ -1.34
NEK3-201ENST00000550331 NDUFS8O00217 210 aa6.66□□□□□ -1.34
NEK3-201ENST00000550331 TM9SF1O15321 606 aa6.66□□□□□ -1.34
NEK3-201ENST00000550331 GPIP06744 558 aa6.66□□□□□ -1.34
NEK3-201ENST00000550331 DBIP07108 87 aaKnown RBP6.66□□□□□ -1.34
NEK3-201ENST00000550331 CHRM4P08173 479 aa6.66□□□□□ -1.34
NEK3-201ENST00000550331 CCNA2P20248 432 aa6.66□□□□□ -1.34
NEK3-201ENST00000550331 APOBEC3AP31941 199 aaPredicted RBP6.66□□□□□ -1.34
NEK3-201ENST00000550331 THBS2P35442 1172 aa6.66□□□□□ -1.34
NEK3-201ENST00000550331 SLC1A6P48664 564 aa6.66□□□□□ -1.34
NEK3-201ENST00000550331 FOXG1P55316 489 aaPredicted RBP6.66□□□□□ -1.34
NEK3-201ENST00000550331 SLC25A3Q00325 362 aa6.66□□□□□ -1.34
NEK3-201ENST00000550331 RUNX1T1Q06455 604 aa6.66□□□□□ -1.34
NEK3-201ENST00000550331 EPS8Q12929 822 aa6.66□□□□□ -1.34
NEK3-201ENST00000550331 SYPL1Q16563 259 aa6.66□□□□□ -1.34
NEK3-201ENST00000550331 OTUD3Q5T2D3 398 aaPredicted RBP6.66□□□□□ -1.34
NEK3-201ENST00000550331 KLHL24Q6TFL4 600 aa6.66□□□□□ -1.34
NEK3-201ENST00000550331 AAED1Q7RTV5 226 aa6.66□□□□□ -1.34
NEK3-201ENST00000550331 ABHD12BQ7Z5M8 362 aaPredicted RBP6.66□□□□□ -1.34
NEK3-201ENST00000550331 HMGN2P46Q86SG4 172 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms