RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 DDX18Q9NVP1 670 aaKnown RBP2.27□□□□□ -2.05
CCDC38-208ENST00000549876 CD274Q9NZQ7 290 aa2.27□□□□□ -2.05
CCDC38-208ENST00000549876 SUN2Q9UH99 717 aa2.27□□□□□ -2.05
CCDC38-208ENST00000549876 ZNF639Q9UID6 485 aa2.27□□□□□ -2.05
CCDC38-208ENST00000549876 ZNF223Q9UK11 482 aaPredicted RBP2.27□□□□□ -2.05
CCDC38-208ENST00000549876 ADAM28Q9UKQ2 775 aa2.27□□□□□ -2.05
CCDC38-208ENST00000549876 PSG11Q9UQ72 335 aa2.27□□□□□ -2.05
CCDC38-208ENST00000549876 POLDIP2Q9Y2S7 368 aa2.27□□□□□ -2.05
CCDC38-208ENST00000549876 MYO10Q9HD67 2058 aa2.27□□□□□ -2.05
CCDC38-208ENST00000549876 WDR19Q8NEZ3 1342 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 A0A075B6Q4 140 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 TUBAL3A6NHL2 446 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 H0YC42 278 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 L7N2F9 121 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 FOXE1O00358 373 aaPredicted RBP2.26□□□□□ -2.05
CCDC38-208ENST00000549876 DNALI1O14645 258 aaPredicted RBP2.26□□□□□ -2.05
CCDC38-208ENST00000549876 CASC3O15234 703 aaKnown RBP2.26□□□□□ -2.05
CCDC38-208ENST00000549876 TAPBPO15533 448 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 EFNA2O43921 213 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 CTAG2O75638 210 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 LRATO95237 230 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 IGHV3-48P01763 117 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 CD55P08174 381 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 FGF4P08620 206 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 OR8U8P0C7N1 319 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 IGLL1P15814 213 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 MMP11P24347 488 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 ATP5A1P25705 553 aaKnown RBP2.26□□□□□ -2.05
CCDC38-208ENST00000549876 RFC4P35249 363 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 RPL4P36578 427 aaKnown RBP2.26□□□□□ -2.05
CCDC38-208ENST00000549876 NUDT1P36639 197 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 BDKRB1P46663 353 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 P2RY1P47900 373 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 EFNB2P52799 333 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 MRPS11P82912 194 aaKnown RBP2.26□□□□□ -2.05
CCDC38-208ENST00000549876 RGS1Q08116 209 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 C1orf61Q13536 156 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 ARHGAP19Q14CB8 494 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 SLC15A2Q16348 729 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 DPYSL2Q16555 572 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 BCL7AQ4VC05 210 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 C6orf226Q5I0X4 101 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 BEND3Q5T5X7 828 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 CARD17Q5XLA6 110 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 ACSM5Q6NUN0 579 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 FAHD2BQ6P2I3 314 aaPredicted RBP2.26□□□□□ -2.05
CCDC38-208ENST00000549876 APTXQ7Z2E3 356 aaKnown RBP2.26□□□□□ -2.05
CCDC38-208ENST00000549876 IFNEQ86WN2 208 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 ECHDC2Q86YB7 292 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 TGIF2LXQ8IUE1 241 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 DHRSXQ8N5I4 330 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 FAM83FQ8NEG4 500 aaPredicted RBP2.26□□□□□ -2.05
CCDC38-208ENST00000549876 NEIL3Q8TAT5 605 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 M1APQ8TC57 530 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 AGR3Q8TD06 166 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 AENQ8WTP8 325 aaKnown RBP2.26□□□□□ -2.05
CCDC38-208ENST00000549876 SCFD1Q8WVM8 642 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 FAHD2AQ96GK7 314 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 MTG1Q9BT17 334 aaPredicted RBP2.26□□□□□ -2.05
CCDC38-208ENST00000549876 NUP58Q9BVL2 599 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 ROPN1BQ9BZX4 212 aaPredicted RBP2.26□□□□□ -2.05
CCDC38-208ENST00000549876 FAM192AQ9GZU8 254 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 EXO5Q9H790 373 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 YY1AP1Q9H869 796 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 CRLF2Q9HC73 371 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 ZFP14Q9HCL3 533 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 MMP26Q9NRE1 261 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 NECAP2Q9NVZ3 263 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 OR1A1Q9P1Q5 309 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 PSME2Q9UL46 239 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 IFT52Q9Y366 437 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 NPTNQ9Y639 398 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 ATP10AO60312 1499 aa2.26□□□□□ -2.05
CCDC38-208ENST00000549876 HEATR9A2RTY3 570 aa2.25□□□□□ -2.05
CCDC38-208ENST00000549876 LRP5LA4QPB2 252 aa2.25□□□□□ -2.05
CCDC38-208ENST00000549876 OR6C65A6NJZ3 312 aa2.25□□□□□ -2.05
CCDC38-208ENST00000549876 FAM166BA8MTA8 275 aa2.25□□□□□ -2.05
CCDC38-208ENST00000549876 PRKAB2O43741 272 aa2.25□□□□□ -2.05
CCDC38-208ENST00000549876 UPK3AO75631 287 aa2.25□□□□□ -2.05
CCDC38-208ENST00000549876 F10P00742 488 aa2.25□□□□□ -2.05
CCDC38-208ENST00000549876 KRT14P02533 472 aa2.25□□□□□ -2.05
CCDC38-208ENST00000549876 CRYGBP07316 175 aa2.25□□□□□ -2.05
CCDC38-208ENST00000549876 TROVE2P10155 538 aaKnown RBP eCLIP2.25□□□□□ -2.05
CCDC38-208ENST00000549876 ANXA8P13928 327 aa2.25□□□□□ -2.05
CCDC38-208ENST00000549876 CYP2B6P20813 491 aa2.25□□□□□ -2.05
CCDC38-208ENST00000549876 IMPDH1P20839 514 aa2.25□□□□□ -2.05
CCDC38-208ENST00000549876 VDAC1P21796 283 aa2.25□□□□□ -2.05
CCDC38-208ENST00000549876 HTR1EP28566 365 aa2.25□□□□□ -2.05
CCDC38-208ENST00000549876 UGT1A5P35504 534 aa2.25□□□□□ -2.05
CCDC38-208ENST00000549876 NOVA1P51513 510 aaKnown RBP2.25□□□□□ -2.05
CCDC38-208ENST00000549876 PLOD1Q02809 727 aaPredicted RBP2.25□□□□□ -2.05
CCDC38-208ENST00000549876 RAB40BQ12829 278 aa2.25□□□□□ -2.05
CCDC38-208ENST00000549876 C16orf72Q14CZ0 275 aa2.25□□□□□ -2.05
CCDC38-208ENST00000549876 AANATQ16613 207 aa2.25□□□□□ -2.05
CCDC38-208ENST00000549876 SLC5A12Q1EHB4 618 aa2.25□□□□□ -2.05
CCDC38-208ENST00000549876 FAM120AOSQ5T036 256 aa2.25□□□□□ -2.05
CCDC38-208ENST00000549876 PDZK1Q5T2W1 519 aa2.25□□□□□ -2.05
CCDC38-208ENST00000549876 ANXA8L1Q5VT79 327 aa2.25□□□□□ -2.05
CCDC38-208ENST00000549876 ATL3Q6DD88 541 aa2.25□□□□□ -2.05
CCDC38-208ENST00000549876 KCNIP4Q6PIL6 250 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms