RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 OMA1Q96E52 524 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 ARSGQ96EG1 525 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 C1GALT1C1Q96EU7 318 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 LMF1Q96S06 567 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 MBOAT4Q96T53 435 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 MNTQ99583 582 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 PRSS27Q9BQR3 290 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 ZNF559Q9BR84 538 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 MESP1Q9BRJ9 268 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 AIFM2Q9BRQ8 373 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 Q9H521 79 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 CACYBPQ9HB71 228 aaKnown RBP7.68□□□□□ -1.18
VPS29-203ENST00000546588 NDRG4Q9ULP0 352 aaKnown RBP7.68□□□□□ -1.18
VPS29-203ENST00000546588 MGAT4BQ9UQ53 548 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 FARSAQ9Y285 508 aaKnown RBP7.68□□□□□ -1.18
VPS29-203ENST00000546588 POFUT2Q9Y2G5 429 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 PTRH2Q9Y3E5 179 aaKnown RBP7.68□□□□□ -1.18
VPS29-203ENST00000546588 FAM32AQ9Y421 112 aaKnown RBP7.68□□□□□ -1.18
VPS29-203ENST00000546588 OR10H1Q9Y4A9 318 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 HSPE1-MOB4S4R3N1 261 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 IGHV3-20A0A0C4DH32 117 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 TRBV4-1A0A0J9YWV2 114 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 SPAARA0A1B0GVQ0 90 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 TRAPPC13A5PLN9 417 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 CLDN24A6NM45 220 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 A8MUA0 341 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 AP3D1O14617 1153 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 RAD1O60671 282 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 UGT2B11O75310 529 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 CYP7B1O75881 506 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 TSPAN9O75954 239 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 SEC24DO94855 1032 aaPredicted RBP7.67□□□□□ -1.18
VPS29-203ENST00000546588 DIRAS1O95057 198 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 TNFSF15O95150 251 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 UTS2O95399 124 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 CYP4B1P13584 511 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 CDH2P19022 906 aaPredicted RBP7.67□□□□□ -1.18
VPS29-203ENST00000546588 TCN2P20062 427 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 RYKP34925 604 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 CBX5P45973 191 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 NR0B1P51843 470 aaKnown RBP7.67□□□□□ -1.18
VPS29-203ENST00000546588 CTBP2P56545 445 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 PLCXD2Q0VAA5 305 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 SNTA1Q13424 505 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 TRAM2Q15035 370 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 SEC23BQ15437 767 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 ZNF791Q3KP31 576 aaPredicted RBP7.67□□□□□ -1.18
VPS29-203ENST00000546588 CCDC157Q569K6 752 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 TTC23Q5W5X9 447 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 GPR139Q6DWJ6 353 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 OR7E24Q6IFN5 339 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 RAB12Q6IQ22 244 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 JMJD6Q6NYC1 403 aaPredicted RBP7.67□□□□□ -1.18
VPS29-203ENST00000546588 PGBD2Q6P3X8 592 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 UGT2A3Q6UWM9 527 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 APOOLQ6UXV4 268 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 SHISA6Q6ZSJ9 500 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 MRGPREQ86SM8 312 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 PRSS58Q8IYP2 241 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 TAGAPQ8N103 731 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 SLC43A2Q8N370 569 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 MAGEE2Q8TD90 523 aaPredicted RBP7.67□□□□□ -1.18
VPS29-203ENST00000546588 FEVQ99581 238 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 FOXB1Q99853 325 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 SLC19A3Q9BZV2 496 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 LAT2Q9GZY6 243 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 TOR3AQ9H497 397 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 CPNE5Q9HCH3 593 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 RLIMQ9NVW2 624 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 DLL3Q9NYJ7 618 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 PDP1Q9P0J1 537 aaPredicted RBP7.67□□□□□ -1.18
VPS29-203ENST00000546588 PRSS50Q9UI38 385 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 ICAM5Q9UMF0 924 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 TESMINQ9Y4I5 508 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 U3KQV3 271 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 NCKAP5O14513 1909 aa7.67□□□□□ -1.18
VPS29-203ENST00000546588 A0A087WUU8 490 aa7.66□□□□□ -1.18
VPS29-203ENST00000546588 NSG1A0A0A6YYJ2 146 aa7.66□□□□□ -1.18
VPS29-203ENST00000546588 TRBV11-1A0A0K0K1C0 115 aa7.66□□□□□ -1.18
VPS29-203ENST00000546588 L7N2F9 121 aa7.66□□□□□ -1.18
VPS29-203ENST00000546588 ZNF264O43296 627 aa7.66□□□□□ -1.18
VPS29-203ENST00000546588 ICOSLGO75144 302 aa7.66□□□□□ -1.18
VPS29-203ENST00000546588 CCNB2O95067 398 aa7.66□□□□□ -1.18
VPS29-203ENST00000546588 SNAP29O95721 258 aa7.66□□□□□ -1.18
VPS29-203ENST00000546588 TSPAN19P0C672 248 aa7.66□□□□□ -1.18
VPS29-203ENST00000546588 LIPCP11150 499 aa7.66□□□□□ -1.18
VPS29-203ENST00000546588 PRG2P13727 222 aa7.66□□□□□ -1.18
VPS29-203ENST00000546588 GSTM3P21266 225 aa7.66□□□□□ -1.18
VPS29-203ENST00000546588 PRKACBP22694 351 aa7.66□□□□□ -1.18
VPS29-203ENST00000546588 F8A1P23610 371 aa7.66□□□□□ -1.18
VPS29-203ENST00000546588 FPR3P25089 353 aa7.66□□□□□ -1.18
VPS29-203ENST00000546588 MST1P26927 711 aa7.66□□□□□ -1.18
VPS29-203ENST00000546588 IL12BP29460 328 aa7.66□□□□□ -1.18
VPS29-203ENST00000546588 PTGDSP41222 190 aa7.66□□□□□ -1.18
VPS29-203ENST00000546588 OMPP47874 163 aa7.66□□□□□ -1.18
VPS29-203ENST00000546588 SLC6A8P48029 635 aa7.66□□□□□ -1.18
VPS29-203ENST00000546588 GSSP48637 474 aa7.66□□□□□ -1.18
VPS29-203ENST00000546588 ARHGDIBP52566 201 aa7.66□□□□□ -1.18
VPS29-203ENST00000546588 ESRRGP62508 458 aa7.66□□□□□ -1.18
VPS29-203ENST00000546588 RPS15P62841 145 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms