RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 ZNF347Q96SE7 839 aa12.18□□□□□ -0.46
SP140-213ENST00000543928 SLC19A3Q9BZV2 496 aa12.18□□□□□ -0.46
SP140-213ENST00000543928 RNF122Q9H9V4 155 aa12.18□□□□□ -0.46
SP140-213ENST00000543928 Q9UFV3 132 aa12.18□□□□□ -0.46
SP140-213ENST00000543928 TESMINQ9Y4I5 508 aa12.18□□□□□ -0.46
SP140-213ENST00000543928 HSPB2A8KAH6 182 aa12.17□□□□□ -0.46
SP140-213ENST00000543928 EIF1BO60739 113 aaKnown RBP12.17□□□□□ -0.46
SP140-213ENST00000543928 ZG16O60844 167 aa12.17□□□□□ -0.46
SP140-213ENST00000543928 AKR7A3O95154 331 aa12.17□□□□□ -0.46
SP140-213ENST00000543928 RCBTB2O95199 551 aa12.17□□□□□ -0.46
SP140-213ENST00000543928 RAP2AP10114 183 aa12.17□□□□□ -0.46
SP140-213ENST00000543928 GTF2E2P29084 291 aaKnown RBP12.17□□□□□ -0.46
SP140-213ENST00000543928 SMSP52788 366 aa12.17□□□□□ -0.46
SP140-213ENST00000543928 H3F3AP84243 136 aa12.17□□□□□ -0.46
SP140-213ENST00000543928 SPIBQ01892 262 aa12.17□□□□□ -0.46
SP140-213ENST00000543928 HSPB2Q16082 182 aa12.17□□□□□ -0.46
SP140-213ENST00000543928 FGD3Q5JSP0 725 aa12.17□□□□□ -0.46
SP140-213ENST00000543928 OR2A2Q6IF42 318 aa12.17□□□□□ -0.46
SP140-213ENST00000543928 CCDC71Q8IV32 467 aaPredicted RBP12.17□□□□□ -0.46
SP140-213ENST00000543928 GCNT2Q8N0V5 402 aa12.17□□□□□ -0.46
SP140-213ENST00000543928 FAM26EQ8N5C1 309 aa12.17□□□□□ -0.46
SP140-213ENST00000543928 C10orf53Q8N6V4 93 aa12.17□□□□□ -0.46
SP140-213ENST00000543928 OR52J3Q8NH60 311 aa12.17□□□□□ -0.46
SP140-213ENST00000543928 PFN4Q8NHR9 129 aa12.17□□□□□ -0.46
SP140-213ENST00000543928 RNF128Q8TEB7 428 aa12.17□□□□□ -0.46
SP140-213ENST00000543928 ABHD3Q8WU67 409 aa12.17□□□□□ -0.46
SP140-213ENST00000543928 RSRC1Q96IZ7 334 aaKnown RBP12.17□□□□□ -0.46
SP140-213ENST00000543928 ZFP3Q96NJ6 502 aa12.17□□□□□ -0.46
SP140-213ENST00000543928 NAA11Q9BSU3 229 aaPredicted RBP12.17□□□□□ -0.46
SP140-213ENST00000543928 ANKRD19PQ9H560 264 aa12.17□□□□□ -0.46
SP140-213ENST00000543928 MEPEQ9NQ76 525 aaPredicted RBP12.17□□□□□ -0.46
SP140-213ENST00000543928 RNF6Q9Y252 685 aa12.17□□□□□ -0.46
SP140-213ENST00000543928 MED31Q9Y3C7 131 aa12.17□□□□□ -0.46
SP140-213ENST00000543928 NCOA6Q14686 2063 aaPredicted RBP12.17□□□□□ -0.46
SP140-213ENST00000543928 USP9XQ93008 2570 aaPredicted RBP12.16□□□□□ -0.46
SP140-213ENST00000543928 A0A1W2PRQ8 180 aa12.16□□□□□ -0.46
SP140-213ENST00000543928 CLEC18AA5D8T8 446 aa12.16□□□□□ -0.46
SP140-213ENST00000543928 ZNF814B7Z6K7 855 aa12.16□□□□□ -0.46
SP140-213ENST00000543928 LRRN3E7EW58 273 aa12.16□□□□□ -0.46
SP140-213ENST00000543928 PIP5K1CO60331 668 aa12.16□□□□□ -0.46
SP140-213ENST00000543928 CYTIPO60759 359 aa12.16□□□□□ -0.46
SP140-213ENST00000543928 RAMP1O60894 148 aa12.16□□□□□ -0.46
SP140-213ENST00000543928 CH25HO95992 272 aa12.16□□□□□ -0.46
SP140-213ENST00000543928 PLGP00747 810 aaPredicted RBP12.16□□□□□ -0.46
SP140-213ENST00000543928 LDLRP01130 860 aa12.16□□□□□ -0.46
SP140-213ENST00000543928 BGLAPP02818 100 aa12.16□□□□□ -0.46
SP140-213ENST00000543928 TMIGD3P0DMS9 266 aaPredicted RBP12.16□□□□□ -0.46
SP140-213ENST00000543928 CBLP22681 906 aa12.16□□□□□ -0.46
SP140-213ENST00000543928 GRPRP30550 384 aa12.16□□□□□ -0.46
SP140-213ENST00000543928 RRM2P31350 389 aa12.16□□□□□ -0.46
SP140-213ENST00000543928 LSM11P83369 360 aaKnown RBP eCLIP12.16□□□□□ -0.466e-26■■■■■ 152.8
SP140-213ENST00000543928 LTBQ06643 244 aa12.16□□□□□ -0.46
SP140-213ENST00000543928 FOXF2Q12947 444 aa12.16□□□□□ -0.46
SP140-213ENST00000543928 CCNIQ14094 377 aa12.16□□□□□ -0.46
SP140-213ENST00000543928 DGCR6Q14129 220 aa12.16□□□□□ -0.46
SP140-213ENST00000543928 RNPS1Q15287 305 aaKnown RBP12.16□□□□□ -0.46
SP140-213ENST00000543928 OTUD3Q5T2D3 398 aaPredicted RBP12.16□□□□□ -0.46
SP140-213ENST00000543928 GTF2IRD2BQ6EKJ0 949 aa12.16□□□□□ -0.46
SP140-213ENST00000543928 PAQR6Q6TCH4 344 aa12.16□□□□□ -0.46
SP140-213ENST00000543928 CLEC18BQ6UXF7 455 aa12.16□□□□□ -0.46
SP140-213ENST00000543928 ZNF730Q6ZMV8 503 aa12.16□□□□□ -0.46
SP140-213ENST00000543928 MRGPRGQ86SM5 289 aa12.16□□□□□ -0.46
SP140-213ENST00000543928 GTF2IRD2Q86UP8 949 aa12.16□□□□□ -0.46
SP140-213ENST00000543928 CCDC103Q8IW40 242 aa12.16□□□□□ -0.46
SP140-213ENST00000543928 MCEMP1Q8IX19 187 aa12.16□□□□□ -0.46
SP140-213ENST00000543928 SLC43A2Q8N370 569 aa12.16□□□□□ -0.46
SP140-213ENST00000543928 TMEM99Q8N816 258 aa12.16□□□□□ -0.46
SP140-213ENST00000543928 CLEC18CQ8NCF0 446 aa12.16□□□□□ -0.46
SP140-213ENST00000543928 OR6S1Q8NH40 331 aa12.16□□□□□ -0.46
SP140-213ENST00000543928 ACOT11Q8WXI4 607 aaPredicted RBP12.16□□□□□ -0.46
SP140-213ENST00000543928 SDCCAG3Q96C92 435 aa12.16□□□□□ -0.46
SP140-213ENST00000543928 DHRS1Q96LJ7 313 aa12.16□□□□□ -0.46
SP140-213ENST00000543928 MOGAT1Q96PD6 335 aa12.16□□□□□ -0.46
SP140-213ENST00000543928 RAB3IPQ96QF0 476 aaPredicted RBP12.16□□□□□ -0.46
SP140-213ENST00000543928 CHID1Q9BWS9 393 aa12.16□□□□□ -0.46
SP140-213ENST00000543928 KLHL4Q9C0H6 718 aa12.16□□□□□ -0.46
SP140-213ENST00000543928 C20orf141Q9NUB4 165 aa12.16□□□□□ -0.46
SP140-213ENST00000543928 CCM2LQ9NUG4 571 aaPredicted RBP12.16□□□□□ -0.46
SP140-213ENST00000543928 COQ3Q9NZJ6 369 aa12.16□□□□□ -0.46
SP140-213ENST00000543928 C6orf203Q9P0P8 240 aaPredicted RBP12.16□□□□□ -0.46
SP140-213ENST00000543928 CLEC4AQ9UMR7 237 aa12.16□□□□□ -0.46
SP140-213ENST00000543928 INTS1Q8N201 2190 aaKnown RBP12.16□□□□□ -0.46
SP140-213ENST00000543928 A0A087WUU8 490 aa12.15□□□□□ -0.46
SP140-213ENST00000543928 TRBV4-1A0A0J9YWV2 114 aa12.15□□□□□ -0.46
SP140-213ENST00000543928 AQP7P3A6NL99 342 aa12.15□□□□□ -0.46
SP140-213ENST00000543928 ENO4A6NNW6 628 aa12.15□□□□□ -0.46
SP140-213ENST00000543928 M0R082 166 aa12.15□□□□□ -0.46
SP140-213ENST00000543928 FZD7O75084 574 aa12.15□□□□□ -0.46
SP140-213ENST00000543928 GADD45GO95257 159 aa12.15□□□□□ -0.46
SP140-213ENST00000543928 MT-ATP6P00846 226 aa12.15□□□□□ -0.46
SP140-213ENST00000543928 RNF224P0DH78 156 aa12.15□□□□□ -0.46
SP140-213ENST00000543928 NQO1P15559 274 aaKnown RBP12.15□□□□□ -0.46
SP140-213ENST00000543928 HOXB6P17509 224 aaKnown RBP12.15□□□□□ -0.46
SP140-213ENST00000543928 CTSSP25774 331 aa12.15□□□□□ -0.46
SP140-213ENST00000543928 SMIM11AP58511 58 aa12.15□□□□□ -0.46
SP140-213ENST00000543928 RASGEF1BQ0VAM2 473 aa12.15□□□□□ -0.46
SP140-213ENST00000543928 MFSD13AQ14CX5 517 aa12.15□□□□□ -0.46
SP140-213ENST00000543928 ZNF74Q16587 644 aa12.15□□□□□ -0.46
SP140-213ENST00000543928 ABLIM2Q6H8Q1 611 aa12.15□□□□□ -0.46
SP140-213ENST00000543928 PODNL1Q6PEZ8 512 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms