RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 MRPL19P49406 292 aaKnown RBP14.87□□□□□ -0.03
VARS2-212ENST00000542001 HNRNPFP52597 415 aaKnown RBP14.87□□□□□ -0.03
VARS2-212ENST00000542001 OR7A5Q15622 319 aa14.87□□□□□ -0.03
VARS2-212ENST00000542001 GALNT11Q8NCW6 608 aa14.87□□□□□ -0.03
VARS2-212ENST00000542001 OR5J2Q8NH18 312 aa14.87□□□□□ -0.03
VARS2-212ENST00000542001 NDUFB11Q9NX14 153 aa14.87□□□□□ -0.03
VARS2-212ENST00000542001 SEC14L5O43304 696 aa14.86□□□□□ -0.03
VARS2-212ENST00000542001 TFP02787 698 aa14.86□□□□□ -0.03
VARS2-212ENST00000542001 GFERP55789 205 aa14.86□□□□□ -0.03
VARS2-212ENST00000542001 UBE2MP61081 183 aaKnown RBP14.86□□□□□ -0.03
VARS2-212ENST00000542001 FGL2Q14314 439 aa14.86□□□□□ -0.03
VARS2-212ENST00000542001 NKAPLQ5M9Q1 402 aa14.86□□□□□ -0.03
VARS2-212ENST00000542001 SLC25A24Q6NUK1 477 aa14.86□□□□□ -0.03
VARS2-212ENST00000542001 LINC00346Q8IVM7 164 aa14.86□□□□□ -0.03
VARS2-212ENST00000542001 CLDN22Q8N7P3 220 aa14.86□□□□□ -0.03
VARS2-212ENST00000542001 TSPAN10Q9H1Z9 355 aaPredicted RBP14.86□□□□□ -0.03
VARS2-212ENST00000542001 ELOVL3Q9HB03 270 aa14.86□□□□□ -0.03
VARS2-212ENST00000542001 ENTPD2Q9Y5L3 495 aa14.86□□□□□ -0.03
VARS2-212ENST00000542001 A0A0A6YYD5 115 aa14.86□□□□□ -0.03
VARS2-212ENST00000542001 PRAMEF25A6NGN4 478 aa14.86□□□□□ -0.03
VARS2-212ENST00000542001 OR2AT4A6NND4 320 aa14.86□□□□□ -0.03
VARS2-212ENST00000542001 DGCR2P98153 550 aa14.86□□□□□ -0.03
VARS2-212ENST00000542001 KCTD18Q6PI47 426 aaPredicted RBP14.86□□□□□ -0.03
VARS2-212ENST00000542001 OR4C15Q8NGM1 316 aa14.86□□□□□ -0.03
VARS2-212ENST00000542001 MED11Q9P086 117 aa14.86□□□□□ -0.03
VARS2-212ENST00000542001 SYT5O00445 386 aa14.86□□□□□ -0.03
VARS2-212ENST00000542001 SCGB1D2O95969 90 aa14.86□□□□□ -0.03
VARS2-212ENST00000542001 AKR1C4P17516 323 aa14.86□□□□□ -0.03
VARS2-212ENST00000542001 DRD1P21728 446 aa14.86□□□□□ -0.03
VARS2-212ENST00000542001 HTR3AP46098 478 aa14.86□□□□□ -0.03
VARS2-212ENST00000542001 SLC25A35Q3KQZ1 300 aa14.86□□□□□ -0.03
VARS2-212ENST00000542001 C1QTNF12Q5T7M4 302 aa14.86□□□□□ -0.03
VARS2-212ENST00000542001 FBXO42Q6P3S6 717 aa14.86□□□□□ -0.03
VARS2-212ENST00000542001 CFAP77Q6ZQR2 320 aa14.86□□□□□ -0.03
VARS2-212ENST00000542001 UBE3DQ7Z6J8 389 aa14.86□□□□□ -0.03
VARS2-212ENST00000542001 TRMT61AQ96FX7 289 aaKnown RBP14.86□□□□□ -0.03
VARS2-212ENST00000542001 SEMA4CQ9C0C4 833 aa14.86□□□□□ -0.03
VARS2-212ENST00000542001 V9GY05 133 aa14.86□□□□□ -0.03
VARS2-212ENST00000542001 SPDEFO95238 335 aa14.85□□□□□ -0.03
VARS2-212ENST00000542001 MAPK3P27361 379 aaPredicted RBP14.85□□□□□ -0.03
VARS2-212ENST00000542001 GDNFP39905 211 aa14.85□□□□□ -0.03
VARS2-212ENST00000542001 VEGFCP49767 419 aa14.85□□□□□ -0.03
VARS2-212ENST00000542001 EMDP50402 254 aa14.85□□□□□ -0.03
VARS2-212ENST00000542001 S100A10P60903 97 aa14.85□□□□□ -0.03
VARS2-212ENST00000542001 LRRC28Q86X40 367 aaPredicted RBP14.85□□□□□ -0.03
VARS2-212ENST00000542001 LRRC56Q8IYG6 542 aaPredicted RBP14.85□□□□□ -0.03
VARS2-212ENST00000542001 SPERTQ8NA61 448 aa14.85□□□□□ -0.03
VARS2-212ENST00000542001 PHOSPHO2Q8TCD6 241 aa14.85□□□□□ -0.03
VARS2-212ENST00000542001 DNAJA4Q8WW22 397 aaPredicted RBP14.85□□□□□ -0.03
VARS2-212ENST00000542001 GIMAP1Q8WWP7 306 aa14.85□□□□□ -0.03
VARS2-212ENST00000542001 TXNDC15Q96J42 360 aa14.85□□□□□ -0.03
VARS2-212ENST00000542001 POLEQ07864 2286 aa14.85□□□□□ -0.03
VARS2-212ENST00000542001 CENPVL1A0A0U1RR11 272 aa14.85□□□□□ -0.03
VARS2-212ENST00000542001 IDSB3KWA1 339 aa14.85□□□□□ -0.03
VARS2-212ENST00000542001 B4DXG7 233 aa14.85□□□□□ -0.03
VARS2-212ENST00000542001 CREBL2O60519 120 aaPredicted RBP14.85□□□□□ -0.03
VARS2-212ENST00000542001 KCNJ13O60928 360 aa14.85□□□□□ -0.03
VARS2-212ENST00000542001 LIMS3P0CW19 117 aa14.85□□□□□ -0.03
VARS2-212ENST00000542001 LIMS4P0CW20 117 aa14.85□□□□□ -0.03
VARS2-212ENST00000542001 PGCP20142 388 aa14.85□□□□□ -0.03
VARS2-212ENST00000542001 PCBP3P57721 371 aaKnown RBP14.85□□□□□ -0.03
VARS2-212ENST00000542001 THSD4Q6ZMP0 1018 aa14.85□□□□□ -0.03
VARS2-212ENST00000542001 NLRP8Q86W28 1048 aa14.85□□□□□ -0.03
VARS2-212ENST00000542001 C19orf47Q8N9M1 422 aaKnown RBP14.85□□□□□ -0.03
VARS2-212ENST00000542001 RCBTB1Q8NDN9 531 aa14.85□□□□□ -0.03
VARS2-212ENST00000542001 OR13C3Q8NGS6 347 aa14.85□□□□□ -0.03
VARS2-212ENST00000542001 DEFB126Q9BYW3 111 aa14.85□□□□□ -0.03
VARS2-212ENST00000542001 PITHD1Q9GZP4 211 aaPredicted RBP14.85□□□□□ -0.03
VARS2-212ENST00000542001 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.85□□□□□ -0.03
VARS2-212ENST00000542001 METTL8Q9H825 291 aaKnown RBP14.85□□□□□ -0.03
VARS2-212ENST00000542001 FLVCR2Q9UPI3 526 aa14.85□□□□□ -0.03
VARS2-212ENST00000542001 TRDV1A0A1B0GX56 115 aa14.85□□□□□ -0.03
VARS2-212ENST00000542001 ECDO95905 644 aaPredicted RBP14.85□□□□□ -0.03
VARS2-212ENST00000542001 SOD1P00441 154 aa14.85□□□□□ -0.03
VARS2-212ENST00000542001 KIR2DL3P43628 341 aa14.85□□□□□ -0.03
VARS2-212ENST00000542001 RIDAP52758 137 aaKnown RBP14.85□□□□□ -0.03
VARS2-212ENST00000542001 NDUFAF7Q7L592 441 aa14.85□□□□□ -0.03
VARS2-212ENST00000542001 OR51D1Q8NGF3 324 aa14.85□□□□□ -0.03
VARS2-212ENST00000542001 OR5H6Q8NGV6 325 aa14.85□□□□□ -0.03
VARS2-212ENST00000542001 GOT1L1Q8NHS2 421 aaPredicted RBP14.85□□□□□ -0.03
VARS2-212ENST00000542001 TSLPQ969D9 159 aa14.85□□□□□ -0.03
VARS2-212ENST00000542001 HYLS1Q96M11 299 aa14.85□□□□□ -0.03
VARS2-212ENST00000542001 DERL3Q96Q80 235 aa14.85□□□□□ -0.03
VARS2-212ENST00000542001 SEC22CQ9BRL7 303 aa14.85□□□□□ -0.03
VARS2-212ENST00000542001 VSX1Q9NZR4 365 aaPredicted RBP14.85□□□□□ -0.03
VARS2-212ENST00000542001 BAIAP2Q9UQB8 552 aa14.85□□□□□ -0.03
VARS2-212ENST00000542001 ROS1P08922 2347 aa14.85□□□□□ -0.03
VARS2-212ENST00000542001 TNS1Q9HBL0 1735 aaKnown RBP14.84□□□□□ -0.03
VARS2-212ENST00000542001 A0A1B0GVI7 797 aa14.84□□□□□ -0.03
VARS2-212ENST00000542001 SERINC4A6NH21 518 aa14.84□□□□□ -0.03
VARS2-212ENST00000542001 E9PI62 339 aa14.84□□□□□ -0.03
VARS2-212ENST00000542001 SLC2A5P22732 501 aa14.84□□□□□ -0.03
VARS2-212ENST00000542001 ZNF41P51814 821 aaPredicted RBP14.84□□□□□ -0.03
VARS2-212ENST00000542001 HNRNPKP61978 463 aaKnown RBP eCLIP14.84□□□□□ -0.03
VARS2-212ENST00000542001 KANSL1Q7Z3B3 1105 aa14.84□□□□□ -0.03
VARS2-212ENST00000542001 MARCH3Q86UD3 253 aa14.84□□□□□ -0.03
VARS2-212ENST00000542001 OR4C3Q8NH37 302 aa14.84□□□□□ -0.03
VARS2-212ENST00000542001 MR1Q95460 341 aa14.84□□□□□ -0.03
VARS2-212ENST00000542001 SERINC1Q9NRX5 453 aa14.84□□□□□ -0.03
VARS2-212ENST00000542001 INIPQ9NRY2 104 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms