RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 NTNG1Q9Y2I2 539 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 MRPL11Q9Y3B7 192 aaKnown RBP3.43□□□□□ -1.86
SNHG1-217ENST00000541578 CACNA1AO00555 2505 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 REV3LO60673 3130 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 A0A1B0GUL6 1792 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 LOC285556D6RIA3 1793 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 FRMPD4Q14CM0 1322 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 SALL1Q9NSC2 1324 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 WDFY4Q6ZS81 3184 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 NOTCH3Q9UM47 2321 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 A0A1B0GU03 582 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 LRP5LA4QPB2 252 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 SNTNA6NMZ2 147 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 FOXI3A8MTJ6 420 aaPredicted RBP3.42□□□□□ -1.86
SNHG1-217ENST00000541578 F5H6K3 240 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 FCN1O00602 326 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 CASQ2O14958 399 aaPredicted RBP3.42□□□□□ -1.86
SNHG1-217ENST00000541578 ARHGEF9O43307 516 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 UGT2B17O75795 530 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 DIRAS1O95057 198 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 TSPAN12O95859 305 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 TBX6O95947 436 aaPredicted RBP3.42□□□□□ -1.86
SNHG1-217ENST00000541578 PGK1P00558 417 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 CA1P00915 261 aaPredicted RBP3.42□□□□□ -1.86
SNHG1-217ENST00000541578 WNT2P09544 360 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 CYBAP13498 195 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 NCK1P16333 377 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 BCL3P20749 454 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 UGT1A4P22310 534 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 GALP22466 123 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 LMO2P25791 158 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 GCAP28676 217 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 TAF6P49848 677 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 EFNB2P52799 333 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 KRTAP10-12P60413 245 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 ZNF33BQ06732 778 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 KLRC3Q07444 240 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 BST1Q10588 318 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 IL18R1Q13478 541 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 ABRAXAS2Q15018 415 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 CCL14Q16627 93 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 TMEM44Q2T9K0 475 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 VWA2Q5GFL6 755 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 ZC2HC1BQ5TFG8 222 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 CARD17Q5XLA6 110 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 OR2A2Q6IF42 318 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 PRSS48Q7RTY5 328 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 NOTCH2NLQ7Z3S9 236 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 PAQR7Q86WK9 346 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 KRTAP7-1Q8IUC3 87 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 LRRC49Q8IUZ0 686 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 MYOCDQ8IZQ8 938 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 C15orf54Q8N8G6 183 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 Q8NBF4 154 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 OR51G2Q8NGK0 314 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 OR1L4Q8NGR5 311 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 KCNG3Q8TAE7 436 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 BRSK1Q8TDC3 778 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 TAF15Q92804 592 aaKnown RBP eCLIP3.42□□□□□ -1.86
SNHG1-217ENST00000541578 C10orf35Q96D05 121 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 CLCC1Q96S66 551 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 CHRDL1Q9BU40 450 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 NUP58Q9BVL2 599 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 FGFBP2Q9BYJ0 223 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 GPR61Q9BZJ8 451 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 IL36GQ9NZH8 169 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 SENP1Q9P0U3 644 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 TMEM181Q9P2C4 612 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 ZNF221Q9UK13 617 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 RNF24Q9Y225 148 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 TIMM10BQ9Y5J6 103 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 MTCH2Q9Y6C9 303 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 ZDBF2Q9HCK1 2354 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 SPTBN4Q9H254 2564 aa3.42□□□□□ -1.86
SNHG1-217ENST00000541578 LRRC37A2A6NM11 1700 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 CFAP54Q96N23 3096 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 CHD9Q3L8U1 2897 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 FER1L5A0AVI2 2057 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 SMCO3A2RU48 225 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 H3BMQ9 156 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 HIP1O00291 1037 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 SNAP91O60641 907 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 CLDN9O95484 217 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 CAPN1P07384 714 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 UGT1A5P35504 534 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 SYKP43405 635 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 P2RY1P47900 373 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 POU3F4P49335 361 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 STARP49675 285 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 ATP4BP51164 291 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 ACLYP53396 1101 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 ATP1B3P54709 279 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 RWDD2BP57060 319 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 RND3P61587 244 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 OGDHQ02218 1023 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 GBE1Q04446 702 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 RAB40BQ12829 278 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 COX10Q12887 443 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 SRSF5Q13243 272 aaKnown RBP3.41□□□□□ -1.86
SNHG1-217ENST00000541578 SIX1Q15475 284 aaPredicted RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms