RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 TMEM27Q9HBJ8 222 aa14.96□□□□□ -0.01
CD9-209ENST00000540891 ADPRHL2Q9NX46 363 aa14.96□□□□□ -0.01
CD9-209ENST00000540891 EMC3Q9P0I2 261 aa14.96□□□□□ -0.01
CD9-209ENST00000540891 GPR52Q9Y2T5 361 aa14.96□□□□□ -0.01
CD9-209ENST00000540891 FLVCR1Q9Y5Y0 555 aa14.96□□□□□ -0.01
CD9-209ENST00000540891 A0A087WUJ7 227 aa14.95□□□□□ -0.02
CD9-209ENST00000540891 DEFB108AA8MXU0 73 aa14.95□□□□□ -0.02
CD9-209ENST00000540891 NME4O00746 187 aa14.95□□□□□ -0.02
CD9-209ENST00000540891 GPR171O14626 319 aa14.95□□□□□ -0.02
CD9-209ENST00000540891 LYPD3O95274 346 aa14.95□□□□□ -0.02
CD9-209ENST00000540891 AHSA1O95433 338 aa14.95□□□□□ -0.02
CD9-209ENST00000540891 ADAP00813 363 aa14.95□□□□□ -0.02
CD9-209ENST00000540891 THY1P04216 161 aa14.95□□□□□ -0.02
CD9-209ENST00000540891 PNMTP11086 282 aa14.95□□□□□ -0.02
CD9-209ENST00000540891 CRYGSP22914 178 aa14.95□□□□□ -0.02
CD9-209ENST00000540891 PRDX6P30041 224 aa14.95□□□□□ -0.02
CD9-209ENST00000540891 RPS5P46782 204 aaKnown RBP14.95□□□□□ -0.02
CD9-209ENST00000540891 NUDT2P50583 147 aa14.95□□□□□ -0.02
CD9-209ENST00000540891 SLC7A2P52569 658 aa14.95□□□□□ -0.02
CD9-209ENST00000540891 CDH12P55289 794 aa14.95□□□□□ -0.02
CD9-209ENST00000540891 POU4F3Q15319 338 aa14.95□□□□□ -0.02
CD9-209ENST00000540891 SFRP5Q5T4F7 317 aa14.95□□□□□ -0.02
CD9-209ENST00000540891 ARPINQ7Z6K5 226 aa14.95□□□□□ -0.02
CD9-209ENST00000540891 CDC20BQ86Y33 519 aa14.95□□□□□ -0.02
CD9-209ENST00000540891 MICU2Q8IYU8 434 aa14.95□□□□□ -0.02
CD9-209ENST00000540891 MFSD8Q8NHS3 518 aa14.95□□□□□ -0.02
CD9-209ENST00000540891 VANGL1Q8TAA9 524 aaPredicted RBP14.95□□□□□ -0.02
CD9-209ENST00000540891 SLC26A7Q8TE54 656 aa14.95□□□□□ -0.02
CD9-209ENST00000540891 SLC47A1Q96FL8 570 aa14.95□□□□□ -0.02
CD9-209ENST00000540891 ZC3HAV1LQ96H79 300 aaKnown RBP14.95□□□□□ -0.02
CD9-209ENST00000540891 HOPXQ9BPY8 73 aaPredicted RBP14.95□□□□□ -0.02
CD9-209ENST00000540891 TAPBPLQ9BX59 468 aa14.95□□□□□ -0.02
CD9-209ENST00000540891 ACTR6Q9GZN1 396 aa14.95□□□□□ -0.02
CD9-209ENST00000540891 FAM53CQ9NYF3 392 aa14.95□□□□□ -0.02
CD9-209ENST00000540891 C6orf203Q9P0P8 240 aaPredicted RBP14.95□□□□□ -0.02
CD9-209ENST00000540891 NOSIPQ9Y314 301 aaKnown RBP14.95□□□□□ -0.02
CD9-209ENST00000540891 ELOVL7A1L3X0 281 aa14.94□□□□□ -0.02
CD9-209ENST00000540891 CASKO14936 926 aa14.94□□□□□ -0.02
CD9-209ENST00000540891 GOSR1O95249 250 aa14.94□□□□□ -0.02
CD9-209ENST00000540891 TNFRSF1BP20333 461 aa14.94□□□□□ -0.02
CD9-209ENST00000540891 KDELR2P33947 212 aa14.94□□□□□ -0.02
CD9-209ENST00000540891 LIPEQ05469 1076 aa14.94□□□□□ -0.02
CD9-209ENST00000540891 ENTPD8Q5MY95 495 aa14.94□□□□□ -0.02
CD9-209ENST00000540891 ZNF613Q6PF04 617 aa14.94□□□□□ -0.02
CD9-209ENST00000540891 LINC00114Q6XXX2 140 aa14.94□□□□□ -0.02
CD9-209ENST00000540891 WDR88Q6ZMY6 472 aa14.94□□□□□ -0.02
CD9-209ENST00000540891 Q6ZT83 130 aa14.94□□□□□ -0.02
CD9-209ENST00000540891 ZIC4Q8N9L1 334 aa14.94□□□□□ -0.02
CD9-209ENST00000540891 RASSF5Q8WWW0 418 aa14.94□□□□□ -0.02
CD9-209ENST00000540891 TAAR8Q969N4 342 aa14.94□□□□□ -0.02
CD9-209ENST00000540891 CMTM5Q96DZ9 223 aa14.94□□□□□ -0.02
CD9-209ENST00000540891 SF3B5Q9BWJ5 86 aaKnown RBP14.94□□□□□ -0.02
CD9-209ENST00000540891 PCDHAC1Q9H158 963 aa14.94□□□□□ -0.02
CD9-209ENST00000540891 OR10A4Q9H209 315 aa14.94□□□□□ -0.02
CD9-209ENST00000540891 LIME1Q9H400 295 aa14.94□□□□□ -0.02
CD9-209ENST00000540891 FANCFQ9NPI8 374 aa14.94□□□□□ -0.02
CD9-209ENST00000540891 SEC14L4Q9UDX3 406 aa14.94□□□□□ -0.02
CD9-209ENST00000540891 ARL2BPQ9Y2Y0 163 aa14.94□□□□□ -0.02
CD9-209ENST00000540891 POLQO75417 2590 aa14.94□□□□□ -0.02
CD9-209ENST00000540891 CPSF4LA6NMK7 179 aaKnown RBP14.93□□□□□ -0.02
CD9-209ENST00000540891 IGHV3-9P01782 118 aa14.93□□□□□ -0.02
CD9-209ENST00000540891 PPP3CBP16298 524 aa14.93□□□□□ -0.02
CD9-209ENST00000540891 PTNP21246 168 aa14.93□□□□□ -0.02
CD9-209ENST00000540891 IGHV1-2P23083 117 aa14.93□□□□□ -0.02
CD9-209ENST00000540891 LOXP28300 417 aaPredicted RBP14.93□□□□□ -0.02
CD9-209ENST00000540891 LTBQ06643 244 aa14.93□□□□□ -0.02
CD9-209ENST00000540891 ITGADQ13349 1161 aa14.93□□□□□ -0.02
CD9-209ENST00000540891 P2RY6Q15077 328 aa14.93□□□□□ -0.02
CD9-209ENST00000540891 SWT1Q5T5J6 900 aaKnown RBP14.93□□□□□ -0.02
CD9-209ENST00000540891 C5orf46Q6UWT4 87 aa14.93□□□□□ -0.02
CD9-209ENST00000540891 CDH24Q86UP0 819 aa14.93□□□□□ -0.02
CD9-209ENST00000540891 ZNF100Q8IYN0 542 aa14.93□□□□□ -0.02
CD9-209ENST00000540891 OR9K2Q8NGE7 335 aa14.93□□□□□ -0.02
CD9-209ENST00000540891 APH1AQ96BI3 265 aa14.93□□□□□ -0.02
CD9-209ENST00000540891 S100PBPQ96BU1 408 aa14.93□□□□□ -0.02
CD9-209ENST00000540891 SLC25A36Q96CQ1 311 aa14.93□□□□□ -0.02
CD9-209ENST00000540891 ZNF385AQ96PM9 386 aaKnown RBP14.93□□□□□ -0.02
CD9-209ENST00000540891 ZNF226Q9NYT6 803 aa14.93□□□□□ -0.02
CD9-209ENST00000540891 ABCD2Q9UBJ2 740 aa14.93□□□□□ -0.02
CD9-209ENST00000540891 SLC9A8Q9Y2E8 581 aa14.93□□□□□ -0.02
CD9-209ENST00000540891 AP3M1Q9Y2T2 418 aa14.93□□□□□ -0.02
CD9-209ENST00000540891 SH3GLB1Q9Y371 365 aa14.93□□□□□ -0.02
CD9-209ENST00000540891 TACC2O95359 2948 aa14.93□□□□□ -0.02
CD9-209ENST00000540891 TRAV36DV7A0A075B6V5 113 aa14.92□□□□□ -0.02
CD9-209ENST00000540891 CHP2O43745 196 aa14.92□□□□□ -0.02
CD9-209ENST00000540891 MRPL33O75394 65 aaKnown RBP14.92□□□□□ -0.02
CD9-209ENST00000540891 CNOT4O95628 575 aaKnown RBP14.92□□□□□ -0.02
CD9-209ENST00000540891 COX5AP20674 150 aa14.92□□□□□ -0.02
CD9-209ENST00000540891 GSK3BP49841 420 aa14.92□□□□□ -0.02
CD9-209ENST00000540891 FOXG1P55316 489 aaPredicted RBP14.92□□□□□ -0.02
CD9-209ENST00000540891 LRRC23Q53EV4 343 aaPredicted RBP14.92□□□□□ -0.02
CD9-209ENST00000540891 CYBRD1Q53TN4 286 aa14.92□□□□□ -0.02
CD9-209ENST00000540891 FAM69AQ5T7M9 428 aa14.92□□□□□ -0.02
CD9-209ENST00000540891 FBXW9Q5XUX1 488 aa14.92□□□□□ -0.02
CD9-209ENST00000540891 CARM1Q86X55 608 aa14.92□□□□□ -0.02
CD9-209ENST00000540891 STEAP2Q8NFT2 490 aa14.92□□□□□ -0.02
CD9-209ENST00000540891 RNF217Q8TC41 542 aa14.92□□□□□ -0.02
CD9-209ENST00000540891 ADAMTS16Q8TE57 1224 aa14.92□□□□□ -0.02
CD9-209ENST00000540891 TMEM45BQ96B21 275 aa14.92□□□□□ -0.02
CD9-209ENST00000540891 TMEM43Q9BTV4 400 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms