RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 SLC17A7Q9P2U7 560 aa10.88□□□□□ -0.67
COPS7A-211ENST00000540408 PCDHB14Q9Y5E9 798 aa10.88□□□□□ -0.67
COPS7A-211ENST00000540408 FAAHO00519 579 aa10.87□□□□□ -0.67
COPS7A-211ENST00000540408 AP3D1O14617 1153 aa10.87□□□□□ -0.67
COPS7A-211ENST00000540408 SPAG7O75391 227 aa10.87□□□□□ -0.67
COPS7A-211ENST00000540408 AKR7A3O95154 331 aa10.87□□□□□ -0.67
COPS7A-211ENST00000540408 VAMP5O95183 116 aa10.87□□□□□ -0.67
COPS7A-211ENST00000540408 NUDT17P0C025 328 aa10.87□□□□□ -0.67
COPS7A-211ENST00000540408 PCMT1P22061 227 aa10.87□□□□□ -0.67
COPS7A-211ENST00000540408 PPOXP50336 477 aa10.87□□□□□ -0.67
COPS7A-211ENST00000540408 COPZ1P61923 177 aa10.87□□□□□ -0.67
COPS7A-211ENST00000540408 TXNL4AP83876 142 aaKnown RBP10.87□□□□□ -0.67
COPS7A-211ENST00000540408 OR7A5Q15622 319 aa10.87□□□□□ -0.67
COPS7A-211ENST00000540408 EFNB3Q15768 340 aa10.87□□□□□ -0.67
COPS7A-211ENST00000540408 DPY19L1Q2PZI1 675 aa10.87□□□□□ -0.67
COPS7A-211ENST00000540408 C3orf36Q3SXR2 165 aa10.87□□□□□ -0.67
COPS7A-211ENST00000540408 TBRG1Q3YBR2 411 aa10.87□□□□□ -0.67
COPS7A-211ENST00000540408 ANKRD16Q6P6B7 361 aa10.87□□□□□ -0.67
COPS7A-211ENST00000540408 ZNF440Q8IYI8 595 aa10.87□□□□□ -0.67
COPS7A-211ENST00000540408 TMEM99Q8N816 258 aa10.87□□□□□ -0.67
COPS7A-211ENST00000540408 OR1K1Q8NGR3 316 aa10.87□□□□□ -0.67
COPS7A-211ENST00000540408 WDR60Q8WVS4 1066 aa10.87□□□□□ -0.67
COPS7A-211ENST00000540408 NEU4Q8WWR8 484 aaPredicted RBP10.87□□□□□ -0.67
COPS7A-211ENST00000540408 HPS1Q92902 700 aa10.87□□□□□ -0.67
COPS7A-211ENST00000540408 PPP1R36Q96LQ0 422 aa10.87□□□□□ -0.67
COPS7A-211ENST00000540408 ZNF385AQ96PM9 386 aaKnown RBP10.87□□□□□ -0.67
COPS7A-211ENST00000540408 TMEFF2Q9UIK5 374 aaPredicted RBP10.87□□□□□ -0.67
COPS7A-211ENST00000540408 NBEAL1Q6ZS30 2694 aa10.87□□□□□ -0.67
COPS7A-211ENST00000540408 LRP5LA4QPB2 252 aa10.86□□□□□ -0.67
COPS7A-211ENST00000540408 AGAP5A6NIR3 686 aa10.86□□□□□ -0.67
COPS7A-211ENST00000540408 LIPT2A6NK58 231 aa10.86□□□□□ -0.67
COPS7A-211ENST00000540408 AQP7P3A6NL99 342 aa10.86□□□□□ -0.67
COPS7A-211ENST00000540408 HMGN4O00479 90 aa10.86□□□□□ -0.67
COPS7A-211ENST00000540408 STAMBPO95630 424 aa10.86□□□□□ -0.67
COPS7A-211ENST00000540408 DBIP07108 87 aaKnown RBP10.86□□□□□ -0.67
COPS7A-211ENST00000540408 HOXB1P14653 301 aaPredicted RBP10.86□□□□□ -0.67
COPS7A-211ENST00000540408 DAOP14920 347 aa10.86□□□□□ -0.67
COPS7A-211ENST00000540408 CLNS1AP54105 237 aaKnown RBP10.86□□□□□ -0.67
COPS7A-211ENST00000540408 NAAAQ02083 359 aa10.86□□□□□ -0.67
COPS7A-211ENST00000540408 IFFO1Q0D2I5 559 aa10.86□□□□□ -0.67
COPS7A-211ENST00000540408 FUT5Q11128 374 aa10.86□□□□□ -0.67
COPS7A-211ENST00000540408 CASP8Q14790 479 aa10.86□□□□□ -0.67
COPS7A-211ENST00000540408 ADIPOQQ15848 244 aa10.86□□□□□ -0.67
COPS7A-211ENST00000540408 PDCD2Q16342 344 aaPredicted RBP10.86□□□□□ -0.67
COPS7A-211ENST00000540408 LRRC74BQ6ZQY2 392 aa10.86□□□□□ -0.67
COPS7A-211ENST00000540408 NUDCD3Q8IVD9 361 aa10.86□□□□□ -0.67
COPS7A-211ENST00000540408 ZIC4Q8N9L1 334 aa10.86□□□□□ -0.67
COPS7A-211ENST00000540408 LINC01356Q8N9X3 169 aa10.86□□□□□ -0.67
COPS7A-211ENST00000540408 TESCQ96BS2 214 aa10.86□□□□□ -0.67
COPS7A-211ENST00000540408 ANKRD27Q96NW4 1050 aa10.86□□□□□ -0.67
COPS7A-211ENST00000540408 ADAM19Q9H013 955 aa10.86□□□□□ -0.67
COPS7A-211ENST00000540408 PLK3Q9H4B4 646 aa10.86□□□□□ -0.67
COPS7A-211ENST00000540408 AKTIPQ9H8T0 292 aa10.86□□□□□ -0.67
COPS7A-211ENST00000540408 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.86□□□□□ -0.676e-24■■■■■ 88.5
COPS7A-211ENST00000540408 MALRD1Q5VYJ5 2156 aa10.86□□□□□ -0.67
COPS7A-211ENST00000540408 ARPC4-TTLL3A0A0A6YYG9 625 aa10.85□□□□□ -0.67
COPS7A-211ENST00000540408 ZC3H12DA2A288 527 aaKnown RBP10.85□□□□□ -0.67
COPS7A-211ENST00000540408 A8MVM7 634 aa10.85□□□□□ -0.67
COPS7A-211ENST00000540408 LGI1O95970 557 aa10.85□□□□□ -0.67
COPS7A-211ENST00000540408 BPGMP07738 259 aa10.85□□□□□ -0.67
COPS7A-211ENST00000540408 MYZAPP0CAP1 466 aa10.85□□□□□ -0.67
COPS7A-211ENST00000540408 NR2F1P10589 423 aa10.85□□□□□ -0.67
COPS7A-211ENST00000540408 NPR2P20594 1047 aa10.85□□□□□ -0.67
COPS7A-211ENST00000540408 GIFP27352 417 aa10.85□□□□□ -0.67
COPS7A-211ENST00000540408 APEX1P27695 318 aaKnown RBP10.85□□□□□ -0.67
COPS7A-211ENST00000540408 S100A3P33764 101 aa10.85□□□□□ -0.67
COPS7A-211ENST00000540408 SH3BGRP55822 239 aaPredicted RBP10.85□□□□□ -0.67
COPS7A-211ENST00000540408 EPS8Q12929 822 aa10.85□□□□□ -0.67
COPS7A-211ENST00000540408 SYPL1Q16563 259 aa10.85□□□□□ -0.67
COPS7A-211ENST00000540408 MRPL2Q5T653 305 aaKnown RBP10.85□□□□□ -0.67
COPS7A-211ENST00000540408 NIPAL3Q6P499 406 aa10.85□□□□□ -0.67
COPS7A-211ENST00000540408 C12orf54Q6X4T0 127 aa10.85□□□□□ -0.67
COPS7A-211ENST00000540408 CREB3L2Q70SY1 520 aa10.85□□□□□ -0.67
COPS7A-211ENST00000540408 RNF130Q86XS8 419 aa10.85□□□□□ -0.67
COPS7A-211ENST00000540408 PEX5LQ8IYB4 626 aa10.85□□□□□ -0.67
COPS7A-211ENST00000540408 FAM169BQ8N8A8 192 aa10.85□□□□□ -0.67
COPS7A-211ENST00000540408 NUP37Q8NFH4 326 aa10.85□□□□□ -0.67
COPS7A-211ENST00000540408 MAGEE2Q8TD90 523 aaPredicted RBP10.85□□□□□ -0.67
COPS7A-211ENST00000540408 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.85□□□□□ -0.67
COPS7A-211ENST00000540408 BCL2L2Q92843 193 aaPredicted RBP10.85□□□□□ -0.67
COPS7A-211ENST00000540408 SLC38A1Q9H2H9 487 aa10.85□□□□□ -0.67
COPS7A-211ENST00000540408 ADPRHL2Q9NX46 363 aa10.85□□□□□ -0.67
COPS7A-211ENST00000540408 CRNNQ9UBG3 495 aaPredicted RBP10.85□□□□□ -0.67
COPS7A-211ENST00000540408 METRNQ9UJH8 293 aa10.85□□□□□ -0.67
COPS7A-211ENST00000540408 A0A096LPE4 126 aa10.84□□□□□ -0.67
COPS7A-211ENST00000540408 A0A096LPI6 279 aa10.84□□□□□ -0.67
COPS7A-211ENST00000540408 A0A1W2PPZ6 126 aa10.84□□□□□ -0.67
COPS7A-211ENST00000540408 CCDC154A6NI56 674 aa10.84□□□□□ -0.67
COPS7A-211ENST00000540408 hCG_2039718K7EN88 272 aa10.84□□□□□ -0.67
COPS7A-211ENST00000540408 TACSTD2P09758 323 aa10.84□□□□□ -0.67
COPS7A-211ENST00000540408 CECR9P0C854 216 aa10.84□□□□□ -0.67
COPS7A-211ENST00000540408 IFNGR1P15260 489 aa10.84□□□□□ -0.67
COPS7A-211ENST00000540408 ARRB2P32121 409 aa10.84□□□□□ -0.67
COPS7A-211ENST00000540408 RUNX1T1Q06455 604 aa10.84□□□□□ -0.67
COPS7A-211ENST00000540408 LRRC74AQ0VAA2 488 aa10.84□□□□□ -0.67
COPS7A-211ENST00000540408 SCGB2A2Q13296 93 aa10.84□□□□□ -0.67
COPS7A-211ENST00000540408 SPANXN4Q5MJ08 99 aa10.84□□□□□ -0.67
COPS7A-211ENST00000540408 PRAMEF8Q5VWM4 474 aa10.84□□□□□ -0.67
COPS7A-211ENST00000540408 PRAMEF7Q5VXH5 474 aa10.84□□□□□ -0.67
COPS7A-211ENST00000540408 WBP2NLQ6ICG8 309 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms