RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 BNIP2Q12982 314 aa6.85□□□□□ -1.31
GNE-205ENST00000539815 MROH9Q5TGP6 573 aa6.85□□□□□ -1.31
GNE-205ENST00000539815 FRG2Q64ET8 278 aa6.85□□□□□ -1.31
GNE-205ENST00000539815 BICRALQ6AI39 1079 aa6.85□□□□□ -1.31
GNE-205ENST00000539815 TYW3Q6IPR3 259 aaKnown RBP6.85□□□□□ -1.31
GNE-205ENST00000539815 DPPA2Q7Z7J5 298 aa6.85□□□□□ -1.31
GNE-205ENST00000539815 BPIFB2Q8N4F0 458 aa6.85□□□□□ -1.31
GNE-205ENST00000539815 C11orf65Q8NCR3 313 aa6.85□□□□□ -1.31
GNE-205ENST00000539815 UBE2FQ969M7 185 aa6.85□□□□□ -1.31
GNE-205ENST00000539815 FRG2BQ96QU4 278 aa6.85□□□□□ -1.31
GNE-205ENST00000539815 ZNF347Q96SE7 839 aa6.85□□□□□ -1.31
GNE-205ENST00000539815 ITPAQ9BY32 194 aa6.85□□□□□ -1.31
GNE-205ENST00000539815 PPA2Q9H2U2 334 aa6.85□□□□□ -1.31
GNE-205ENST00000539815 PCDHB10Q9UN67 800 aa6.85□□□□□ -1.31
GNE-205ENST00000539815 MBD3L4A6NDZ8 208 aaPredicted RBP6.85□□□□□ -1.31
GNE-205ENST00000539815 MBD3L5A6NJ08 208 aaPredicted RBP6.85□□□□□ -1.31
GNE-205ENST00000539815 CCDC188H7C350 402 aa6.85□□□□□ -1.31
GNE-205ENST00000539815 SMAD9O15198 467 aaKnown RBP6.85□□□□□ -1.31
GNE-205ENST00000539815 MRPL33O75394 65 aaKnown RBP6.85□□□□□ -1.31
GNE-205ENST00000539815 LYPLA1O75608 230 aaPredicted RBP6.85□□□□□ -1.31
GNE-205ENST00000539815 CLPXO76031 633 aa6.85□□□□□ -1.31
GNE-205ENST00000539815 RAB3AP20336 220 aa6.85□□□□□ -1.31
GNE-205ENST00000539815 CRYGSP22914 178 aa6.85□□□□□ -1.31
GNE-205ENST00000539815 FPR2P25090 351 aa6.85□□□□□ -1.31
GNE-205ENST00000539815 NAGLUP54802 743 aa6.85□□□□□ -1.31
GNE-205ENST00000539815 DUSP2Q05923 314 aa6.85□□□□□ -1.31
GNE-205ENST00000539815 FOXO1Q12778 655 aa6.85□□□□□ -1.31
GNE-205ENST00000539815 RIN1Q13671 783 aa6.85□□□□□ -1.31
GNE-205ENST00000539815 EBPQ15125 230 aaKnown RBP6.85□□□□□ -1.31
GNE-205ENST00000539815 SSX2Q16385 188 aa6.85□□□□□ -1.31
GNE-205ENST00000539815 ZBED5Q49AG3 693 aa6.85□□□□□ -1.31
GNE-205ENST00000539815 LIPJQ5W064 366 aa6.85□□□□□ -1.31
GNE-205ENST00000539815 FAM91A1Q658Y4 838 aa6.85□□□□□ -1.31
GNE-205ENST00000539815 C18orf63Q68DL7 685 aa6.85□□□□□ -1.31
GNE-205ENST00000539815 ABHD12BQ7Z5M8 362 aaPredicted RBP6.85□□□□□ -1.31
GNE-205ENST00000539815 CCDC103Q8IW40 242 aa6.85□□□□□ -1.31
GNE-205ENST00000539815 RBM15BQ8NDT2 890 aaKnown RBP6.85□□□□□ -1.31
GNE-205ENST00000539815 KAT2AQ92830 837 aa6.85□□□□□ -1.31
GNE-205ENST00000539815 CCDC124Q96CT7 223 aaKnown RBP6.85□□□□□ -1.31
GNE-205ENST00000539815 C11orf24Q96F05 449 aaPredicted RBP6.85□□□□□ -1.31
GNE-205ENST00000539815 MS4A8Q9BY19 250 aa6.85□□□□□ -1.31
GNE-205ENST00000539815 TXLNGYQ9BZA5 131 aa6.85□□□□□ -1.31
GNE-205ENST00000539815 CD244Q9BZW8 370 aa6.85□□□□□ -1.31
GNE-205ENST00000539815 MS4A7Q9GZW8 240 aaPredicted RBP6.85□□□□□ -1.31
GNE-205ENST00000539815 VSX1Q9NZR4 365 aaPredicted RBP6.85□□□□□ -1.31
GNE-205ENST00000539815 HEY2Q9UBP5 337 aa6.85□□□□□ -1.31
GNE-205ENST00000539815 MID2Q9UJV3 735 aa6.85□□□□□ -1.31
GNE-205ENST00000539815 RNF11Q9Y3C5 154 aa6.85□□□□□ -1.31
GNE-205ENST00000539815 DSCAMO60469 2012 aa6.84□□□□□ -1.31
GNE-205ENST00000539815 IGKV1-8A0A0C4DH67 115 aa6.84□□□□□ -1.31
GNE-205ENST00000539815 A0A0G2JND7 137 aa6.84□□□□□ -1.31
GNE-205ENST00000539815 PINLYPA6NC86 204 aa6.84□□□□□ -1.31
GNE-205ENST00000539815 H3BNX3 289 aa6.84□□□□□ -1.31
GNE-205ENST00000539815 GNAO1P09471 354 aa6.84□□□□□ -1.31
GNE-205ENST00000539815 ANXA8P13928 327 aa6.84□□□□□ -1.31
GNE-205ENST00000539815 CEACAM8P31997 349 aaPredicted RBP6.84□□□□□ -1.31
GNE-205ENST00000539815 GTF2H2Q13888 395 aa6.84□□□□□ -1.31
GNE-205ENST00000539815 FASTKD3Q14CZ7 662 aaKnown RBP6.84□□□□□ -1.31
GNE-205ENST00000539815 ANXA8L1Q5VT79 327 aa6.84□□□□□ -1.31
GNE-205ENST00000539815 GTF2H2CQ6P1K8 395 aa6.84□□□□□ -1.31
GNE-205ENST00000539815 PEG10Q86TG7 708 aaKnown RBP6.84□□□□□ -1.31
GNE-205ENST00000539815 TM4SF19Q96DZ7 209 aa6.84□□□□□ -1.31
GNE-205ENST00000539815 C1QTNF6Q9BXI9 259 aa6.84□□□□□ -1.31
GNE-205ENST00000539815 PRRG3Q9BZD7 231 aa6.84□□□□□ -1.31
GNE-205ENST00000539815 QRSL1Q9H0R6 528 aaKnown RBP6.84□□□□□ -1.31
GNE-205ENST00000539815 SLCO5A1Q9H2Y9 848 aa6.84□□□□□ -1.31
GNE-205ENST00000539815 GALNT9Q9HCQ5 603 aa6.84□□□□□ -1.31
GNE-205ENST00000539815 WIF1Q9Y5W5 379 aa6.84□□□□□ -1.31
GNE-205ENST00000539815 NPIPA5A0A0B4J1W7 369 aa6.84□□□□□ -1.31
GNE-205ENST00000539815 ACOD1A6NK06 481 aa6.84□□□□□ -1.31
GNE-205ENST00000539815 C9JVG2 144 aa6.84□□□□□ -1.31
GNE-205ENST00000539815 NPIPA7E9PJI5 369 aa6.84□□□□□ -1.31
GNE-205ENST00000539815 PSMD9O00233 223 aa6.84□□□□□ -1.31
GNE-205ENST00000539815 ZNF780AO75290 641 aaPredicted RBP6.84□□□□□ -1.31
GNE-205ENST00000539815 WISP2O76076 250 aa6.84□□□□□ -1.31
GNE-205ENST00000539815 NPIPA8P0DM63 369 aa6.84□□□□□ -1.31
GNE-205ENST00000539815 PTNP21246 168 aa6.84□□□□□ -1.31
GNE-205ENST00000539815 USF1P22415 310 aaPredicted RBP6.84□□□□□ -1.31
GNE-205ENST00000539815 ABCD3P28288 659 aa6.84□□□□□ -1.31
GNE-205ENST00000539815 GABRA3P34903 492 aa6.84□□□□□ -1.31
GNE-205ENST00000539815 PPICP45877 212 aa6.84□□□□□ -1.31
GNE-205ENST00000539815 PRR5P85299 388 aa6.84□□□□□ -1.31
GNE-205ENST00000539815 ZNF460Q14592 562 aa6.84□□□□□ -1.31
GNE-205ENST00000539815 ZNF846Q147U1 533 aa6.84□□□□□ -1.31
GNE-205ENST00000539815 SEC23BQ15437 767 aa6.84□□□□□ -1.31
GNE-205ENST00000539815 NTRK2Q16620 822 aa6.84□□□□□ -1.31
GNE-205ENST00000539815 TMEM44Q2T9K0 475 aa6.84□□□□□ -1.31
GNE-205ENST00000539815 TMEM176BQ3YBM2 270 aaPredicted RBP6.84□□□□□ -1.31
GNE-205ENST00000539815 SLC43A2Q8N370 569 aa6.84□□□□□ -1.31
GNE-205ENST00000539815 OR6K3Q8NGY3 331 aa6.84□□□□□ -1.31
GNE-205ENST00000539815 PCNPQ8WW12 178 aaKnown RBP6.84□□□□□ -1.31
GNE-205ENST00000539815 PTP4A1Q93096 173 aa6.84□□□□□ -1.31
GNE-205ENST00000539815 ZNF775Q96BV0 537 aaPredicted RBP6.84□□□□□ -1.31
GNE-205ENST00000539815 TMEM41AQ96HV5 264 aa6.84□□□□□ -1.31
GNE-205ENST00000539815 C1orf50Q9BV19 199 aa6.84□□□□□ -1.31
GNE-205ENST00000539815 DERL2Q9GZP9 239 aa6.84□□□□□ -1.31
GNE-205ENST00000539815 NOL11Q9H8H0 719 aaKnown RBP6.84□□□□□ -1.31
GNE-205ENST00000539815 PARPBPQ9NWS1 579 aa6.84□□□□□ -1.31
GNE-205ENST00000539815 TO15178 435 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 EMC8O43402 210 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms