RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 THBS1P07996 1170 aa18.64■□□□□ 0.57
TMEM260-203ENST00000539559 EMDP50402 254 aa18.64■□□□□ 0.57
TMEM260-203ENST00000539559 RAG2P55895 527 aa18.64■□□□□ 0.57
TMEM260-203ENST00000539559 PLA2G7Q13093 441 aa18.64■□□□□ 0.57
TMEM260-203ENST00000539559 SLC35F2Q8IXU6 374 aa18.64■□□□□ 0.57
TMEM260-203ENST00000539559 DNAAF1Q8NEP3 725 aa18.64■□□□□ 0.57
TMEM260-203ENST00000539559 OR5T3Q8NGG3 340 aa18.64■□□□□ 0.57
TMEM260-203ENST00000539559 PMEPA1Q969W9 287 aa18.64■□□□□ 0.57
TMEM260-203ENST00000539559 CDCA3Q99618 268 aaPredicted RBP18.64■□□□□ 0.57
TMEM260-203ENST00000539559 NPDC1Q9NQX5 325 aaPredicted RBP18.64■□□□□ 0.57
TMEM260-203ENST00000539559 SDHAF2Q9NX18 166 aa18.64■□□□□ 0.57
TMEM260-203ENST00000539559 hCG_1807616A0A1W2PRN6 198 aa18.64■□□□□ 0.57
TMEM260-203ENST00000539559 PRR32B1ATL7 298 aa18.64■□□□□ 0.57
TMEM260-203ENST00000539559 MCIDASD6RGH6 385 aa18.64■□□□□ 0.57
TMEM260-203ENST00000539559 CT62P0C5K7 136 aa18.64■□□□□ 0.57
TMEM260-203ENST00000539559 CPMP14384 443 aa18.64■□□□□ 0.57
TMEM260-203ENST00000539559 PSMA6P60900 246 aaKnown RBP18.64■□□□□ 0.57
TMEM260-203ENST00000539559 SRSF5Q13243 272 aaKnown RBP18.64■□□□□ 0.57
TMEM260-203ENST00000539559 MELKQ14680 651 aa18.64■□□□□ 0.57
TMEM260-203ENST00000539559 MEIOBQ8N635 442 aa18.64■□□□□ 0.57
TMEM260-203ENST00000539559 KLHL15Q96M94 604 aa18.64■□□□□ 0.57
TMEM260-203ENST00000539559 NMNAT3Q96T66 252 aa18.64■□□□□ 0.57
TMEM260-203ENST00000539559 HDAC8Q9BY41 377 aa18.64■□□□□ 0.57
TMEM260-203ENST00000539559 FKBP7Q9Y680 259 aa18.64■□□□□ 0.57
TMEM260-203ENST00000539559 TCRBV16S1A1N1A0A5B0 115 aa18.63■□□□□ 0.57
TMEM260-203ENST00000539559 RPP14O95059 124 aaKnown RBP18.63■□□□□ 0.57
TMEM260-203ENST00000539559 SERPINA3P01011 423 aa18.63■□□□□ 0.57
TMEM260-203ENST00000539559 NANOS3P60323 173 aaKnown RBP18.63■□□□□ 0.57
TMEM260-203ENST00000539559 ACTC1P68032 377 aa18.63■□□□□ 0.57
TMEM260-203ENST00000539559 ACTA1P68133 377 aa18.63■□□□□ 0.57
TMEM260-203ENST00000539559 C7orf50Q9BRJ6 194 aaKnown RBP18.63■□□□□ 0.57
TMEM260-203ENST00000539559 PBX4Q9BYU1 374 aa18.63■□□□□ 0.57
TMEM260-203ENST00000539559 REG4Q9BYZ8 158 aa18.63■□□□□ 0.57
TMEM260-203ENST00000539559 C12orf10Q9HB07 376 aa18.63■□□□□ 0.57
TMEM260-203ENST00000539559 FGF17O60258 216 aa18.63■□□□□ 0.57
TMEM260-203ENST00000539559 AK4P27144 223 aaPredicted RBP18.63■□□□□ 0.57
TMEM260-203ENST00000539559 ADH7P40394 386 aa18.63■□□□□ 0.57
TMEM260-203ENST00000539559 C2orf68Q2NKX9 166 aa18.63■□□□□ 0.57
TMEM260-203ENST00000539559 NDUFAF6Q330K2 333 aa18.63■□□□□ 0.57
TMEM260-203ENST00000539559 NHLRC3Q5JS37 347 aa18.63■□□□□ 0.57
TMEM260-203ENST00000539559 FAM198BQ6UWH4 519 aa18.63■□□□□ 0.57
TMEM260-203ENST00000539559 SYNPRQ8TBG9 265 aa18.63■□□□□ 0.57
TMEM260-203ENST00000539559 LCN9Q8WX39 176 aa18.63■□□□□ 0.57
TMEM260-203ENST00000539559 GAL3ST3Q96A11 431 aa18.63■□□□□ 0.57
TMEM260-203ENST00000539559 CNN2Q99439 309 aaKnown RBP18.63■□□□□ 0.57
TMEM260-203ENST00000539559 ZCCHC4Q9H5U6 513 aa18.63■□□□□ 0.57
TMEM260-203ENST00000539559 IFITM5A6NNB3 132 aa18.62■□□□□ 0.57
TMEM260-203ENST00000539559 FMO6PO60774 539 aa18.62■□□□□ 0.57
TMEM260-203ENST00000539559 CTSVO60911 334 aa18.62■□□□□ 0.57
TMEM260-203ENST00000539559 KRT33AO76009 404 aa18.62■□□□□ 0.57
TMEM260-203ENST00000539559 TGM6O95932 706 aa18.62■□□□□ 0.57
TMEM260-203ENST00000539559 ATXN8OSP0DMR3 200 aa18.62■□□□□ 0.57
TMEM260-203ENST00000539559 RPS4Y1P22090 263 aaKnown RBP18.62■□□□□ 0.57
TMEM260-203ENST00000539559 SOX2P48431 317 aa18.62■□□□□ 0.57
TMEM260-203ENST00000539559 ZMYND11Q15326 602 aa18.62■□□□□ 0.57
TMEM260-203ENST00000539559 TANGO2Q6ICL3 276 aa18.62■□□□□ 0.57
TMEM260-203ENST00000539559 FBXO42Q6P3S6 717 aa18.62■□□□□ 0.57
TMEM260-203ENST00000539559 RD3Q7Z3Z2 195 aa18.62■□□□□ 0.57
TMEM260-203ENST00000539559 KCTD20Q7Z5Y7 419 aa18.62■□□□□ 0.57
TMEM260-203ENST00000539559 C1orf216Q8TAB5 229 aa18.62■□□□□ 0.57
TMEM260-203ENST00000539559 NKX2-4Q9H2Z4 354 aa18.62■□□□□ 0.57
TMEM260-203ENST00000539559 TMEM27Q9HBJ8 222 aa18.62■□□□□ 0.57
TMEM260-203ENST00000539559 NCDNQ9UBB6 729 aa18.62■□□□□ 0.57
TMEM260-203ENST00000539559 PLSCR5A0PG75 271 aa18.62■□□□□ 0.57
TMEM260-203ENST00000539559 ARPC5O15511 151 aa18.62■□□□□ 0.57
TMEM260-203ENST00000539559 DPP4P27487 766 aa18.62■□□□□ 0.57
TMEM260-203ENST00000539559 PTH2RP49190 550 aa18.62■□□□□ 0.57
TMEM260-203ENST00000539559 METTL11BQ5VVY1 283 aa18.62■□□□□ 0.57
TMEM260-203ENST00000539559 OR4N2Q8NGD1 307 aa18.62■□□□□ 0.57
TMEM260-203ENST00000539559 DMRTA2Q96SC8 542 aa18.62■□□□□ 0.57
TMEM260-203ENST00000539559 NANSQ9NR45 359 aa18.62■□□□□ 0.57
TMEM260-203ENST00000539559 PHPT1Q9NRX4 125 aaPredicted RBP18.62■□□□□ 0.57
TMEM260-203ENST00000539559 KLHL9Q9P2J3 617 aa18.62■□□□□ 0.57
TMEM260-203ENST00000539559 C2orf16Q68DN1 1984 aa18.62■□□□□ 0.57
TMEM260-203ENST00000539559 CHURC1-FNTBB4DL54 471 aa18.61■□□□□ 0.57
TMEM260-203ENST00000539559 SIGLEC5O15389 551 aa18.61■□□□□ 0.57
TMEM260-203ENST00000539559 AGR2O95994 175 aa18.61■□□□□ 0.57
TMEM260-203ENST00000539559 FCARP24071 287 aa18.61■□□□□ 0.57
TMEM260-203ENST00000539559 SIGLEC14Q08ET2 396 aa18.61■□□□□ 0.57
TMEM260-203ENST00000539559 RPL13AP3Q6NVV1 102 aa18.61■□□□□ 0.57
TMEM260-203ENST00000539559 OVCH1Q7RTY7 1134 aa18.61■□□□□ 0.57
TMEM260-203ENST00000539559 PAQR7Q86WK9 346 aa18.61■□□□□ 0.57
TMEM260-203ENST00000539559 OR6M1Q8NGM8 313 aa18.61■□□□□ 0.57
TMEM260-203ENST00000539559 RGP1Q92546 391 aaPredicted RBP18.61■□□□□ 0.57
TMEM260-203ENST00000539559 HSPA12BQ96MM6 686 aa18.61■□□□□ 0.57
TMEM260-203ENST00000539559 NTMQ9P121 344 aa18.61■□□□□ 0.57
TMEM260-203ENST00000539559 A0A1B0GTH9 108 aa18.61■□□□□ 0.57
TMEM260-203ENST00000539559 ATP6V1G2-DDX39BF2Z307 99 aa18.61■□□□□ 0.57
TMEM260-203ENST00000539559 CTDSPLO15194 276 aa18.61■□□□□ 0.57
TMEM260-203ENST00000539559 CDK2P24941 298 aa18.61■□□□□ 0.57
TMEM260-203ENST00000539559 SLC6A6P31641 620 aa18.61■□□□□ 0.57
TMEM260-203ENST00000539559 P2RX1P51575 399 aa18.61■□□□□ 0.57
TMEM260-203ENST00000539559 HYAL4Q2M3T9 481 aa18.61■□□□□ 0.57
TMEM260-203ENST00000539559 ALG10BQ5I7T1 473 aa18.61■□□□□ 0.57
TMEM260-203ENST00000539559 TMEM69Q5SWH9 247 aa18.61■□□□□ 0.57
TMEM260-203ENST00000539559 GLDNQ6ZMI3 551 aaPredicted RBP18.61■□□□□ 0.57
TMEM260-203ENST00000539559 OR5M1Q8NGP8 315 aa18.61■□□□□ 0.57
TMEM260-203ENST00000539559 FCAMRQ8WWV6 532 aa18.61■□□□□ 0.57
TMEM260-203ENST00000539559 RASD2Q96D21 266 aa18.61■□□□□ 0.57
TMEM260-203ENST00000539559 SLC6A17Q9H1V8 727 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms