RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 PRAMEF7Q5VXH5 474 aa16.77■□□□□ 0.28
TNFRSF1A-212ENST00000539372 GTPBP3Q969Y2 492 aaKnown RBP16.77■□□□□ 0.28
TNFRSF1A-212ENST00000539372 ZNF385AQ96PM9 386 aaKnown RBP16.77■□□□□ 0.28
TNFRSF1A-212ENST00000539372 TAPBPLQ9BX59 468 aa16.77■□□□□ 0.28
TNFRSF1A-212ENST00000539372 C1QTNF6Q9BXI9 259 aa16.77■□□□□ 0.28
TNFRSF1A-212ENST00000539372 SLC52A3Q9NQ40 469 aa16.77■□□□□ 0.28
TNFRSF1A-212ENST00000539372 INTS9Q9NV88 658 aaKnown RBP16.77■□□□□ 0.28
TNFRSF1A-212ENST00000539372 PARPBPQ9NWS1 579 aa16.77■□□□□ 0.28
TNFRSF1A-212ENST00000539372 CISD1Q9NZ45 108 aaKnown RBP16.77■□□□□ 0.28
TNFRSF1A-212ENST00000539372 VAPAQ9P0L0 249 aa16.77■□□□□ 0.28
TNFRSF1A-212ENST00000539372 SLC25A15Q9Y619 301 aa16.77■□□□□ 0.28
TNFRSF1A-212ENST00000539372 AQP7P3A6NL99 342 aa16.76■□□□□ 0.27
TNFRSF1A-212ENST00000539372 OVOL3O00110 214 aa16.76■□□□□ 0.27
TNFRSF1A-212ENST00000539372 PDLIM1O00151 329 aa16.76■□□□□ 0.27
TNFRSF1A-212ENST00000539372 HEXAP06865 529 aa16.76■□□□□ 0.27
TNFRSF1A-212ENST00000539372 SPOCK1Q08629 439 aa16.76■□□□□ 0.27
TNFRSF1A-212ENST00000539372 GABRA6Q16445 453 aa16.76■□□□□ 0.27
TNFRSF1A-212ENST00000539372 SSX8Q7RTT4 187 aa16.76■□□□□ 0.27
TNFRSF1A-212ENST00000539372 PIAS4Q8N2W9 510 aaPredicted RBP16.76■□□□□ 0.27
TNFRSF1A-212ENST00000539372 ZIC4Q8N9L1 334 aa16.76■□□□□ 0.27
TNFRSF1A-212ENST00000539372 TMEM45BQ96B21 275 aa16.76■□□□□ 0.27
TNFRSF1A-212ENST00000539372 MUS81Q96NY9 551 aa16.76■□□□□ 0.27
TNFRSF1A-212ENST00000539372 RSPO3Q9BXY4 272 aaPredicted RBP16.76■□□□□ 0.27
TNFRSF1A-212ENST00000539372 IKZF5Q9H5V7 419 aa16.76■□□□□ 0.27
TNFRSF1A-212ENST00000539372 CADP27708 2225 aa16.76■□□□□ 0.27
TNFRSF1A-212ENST00000539372 FAM171A2A8MVW0 826 aa16.75■□□□□ 0.27
TNFRSF1A-212ENST00000539372 HMGB1P1B2RPK0 211 aaPredicted RBP16.75■□□□□ 0.27
TNFRSF1A-212ENST00000539372 TMEM229AB2RXF0 380 aa16.75■□□□□ 0.27
TNFRSF1A-212ENST00000539372 M0R1B8 84 aa16.75■□□□□ 0.27
TNFRSF1A-212ENST00000539372 ARAFP10398 606 aa16.75■□□□□ 0.27
TNFRSF1A-212ENST00000539372 PTNP21246 168 aa16.75■□□□□ 0.27
TNFRSF1A-212ENST00000539372 ATP4BP51164 291 aa16.75■□□□□ 0.27
TNFRSF1A-212ENST00000539372 SQLEQ14534 574 aa16.75■□□□□ 0.27
TNFRSF1A-212ENST00000539372 TMEM225Q6GV28 225 aa16.75■□□□□ 0.27
TNFRSF1A-212ENST00000539372 OR7E24Q6IFN5 339 aa16.75■□□□□ 0.27
TNFRSF1A-212ENST00000539372 AAED1Q7RTV5 226 aa16.75■□□□□ 0.27
TNFRSF1A-212ENST00000539372 HDXQ7Z353 690 aa16.75■□□□□ 0.27
TNFRSF1A-212ENST00000539372 COMTD1Q86VU5 262 aa16.75■□□□□ 0.27
TNFRSF1A-212ENST00000539372 SF3B5Q9BWJ5 86 aaKnown RBP16.75■□□□□ 0.27
TNFRSF1A-212ENST00000539372 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.75■□□□□ 0.27
TNFRSF1A-212ENST00000539372 PRDM4Q9UKN5 801 aa16.75■□□□□ 0.27
TNFRSF1A-212ENST00000539372 NIPBLQ6KC79 2804 aaeCLIP16.75■□□□□ 0.27
TNFRSF1A-212ENST00000539372 TRBV5-3A0A0A0MS03 114 aa16.74■□□□□ 0.27
TNFRSF1A-212ENST00000539372 NPIPB7O75200 414 aa16.74■□□□□ 0.27
TNFRSF1A-212ENST00000539372 AHSA1O95433 338 aa16.74■□□□□ 0.27
TNFRSF1A-212ENST00000539372 ETS2P15036 469 aa16.74■□□□□ 0.27
TNFRSF1A-212ENST00000539372 CDH2P19022 906 aaPredicted RBP16.74■□□□□ 0.27
TNFRSF1A-212ENST00000539372 PPIBP23284 216 aaKnown RBP16.74■□□□□ 0.27
TNFRSF1A-212ENST00000539372 P2RY4P51582 365 aa16.74■□□□□ 0.27
TNFRSF1A-212ENST00000539372 CDK6Q00534 326 aa16.74■□□□□ 0.27
TNFRSF1A-212ENST00000539372 KRTAP21-3Q3LHN1 58 aa16.74■□□□□ 0.27
TNFRSF1A-212ENST00000539372 KLHL17Q6TDP4 642 aa16.74■□□□□ 0.27
TNFRSF1A-212ENST00000539372 TMEM108Q6UXF1 575 aa16.74■□□□□ 0.27
TNFRSF1A-212ENST00000539372 WDR31Q8NA23 367 aa16.74■□□□□ 0.27
TNFRSF1A-212ENST00000539372 CKAP2Q8WWK9 683 aa16.74■□□□□ 0.27
TNFRSF1A-212ENST00000539372 SLC25A36Q96CQ1 311 aa16.74■□□□□ 0.27
TNFRSF1A-212ENST00000539372 TRMT61AQ96FX7 289 aaKnown RBP16.74■□□□□ 0.27
TNFRSF1A-212ENST00000539372 SLCO5A1Q9H2Y9 848 aa16.74■□□□□ 0.27
TNFRSF1A-212ENST00000539372 RPS6KB2Q9UBS0 482 aa16.74■□□□□ 0.27
TNFRSF1A-212ENST00000539372 DCTN4Q9UJW0 460 aa16.74■□□□□ 0.27
TNFRSF1A-212ENST00000539372 ELOA3DA6NLF2 546 aaPredicted RBP16.73■□□□□ 0.27
TNFRSF1A-212ENST00000539372 TPST1O60507 370 aa16.73■□□□□ 0.27
TNFRSF1A-212ENST00000539372 CD8AP01732 235 aa16.73■□□□□ 0.27
TNFRSF1A-212ENST00000539372 PTAFRP25105 342 aa16.73■□□□□ 0.27
TNFRSF1A-212ENST00000539372 CD40P25942 277 aa16.73■□□□□ 0.27
TNFRSF1A-212ENST00000539372 HTR2AP28223 471 aa16.73■□□□□ 0.27
TNFRSF1A-212ENST00000539372 MPGP29372 298 aa16.73■□□□□ 0.27
TNFRSF1A-212ENST00000539372 PRKAR1BP31321 381 aa16.73■□□□□ 0.27
TNFRSF1A-212ENST00000539372 RPS5P46782 204 aaKnown RBP16.73■□□□□ 0.27
TNFRSF1A-212ENST00000539372 SLC25A3Q00325 362 aa16.73■□□□□ 0.27
TNFRSF1A-212ENST00000539372 EGR4Q05215 589 aa16.73■□□□□ 0.27
TNFRSF1A-212ENST00000539372 LGALS3BPQ08380 585 aa16.73■□□□□ 0.27
TNFRSF1A-212ENST00000539372 TNK1Q13470 666 aa16.73■□□□□ 0.27
TNFRSF1A-212ENST00000539372 SCARB2Q14108 478 aa16.73■□□□□ 0.27
TNFRSF1A-212ENST00000539372 ELOA3BQ3SY89 546 aa16.73■□□□□ 0.27
TNFRSF1A-212ENST00000539372 GLIPR1L2Q4G1C9 344 aa16.73■□□□□ 0.27
TNFRSF1A-212ENST00000539372 REEP3Q6NUK4 255 aa16.73■□□□□ 0.27
TNFRSF1A-212ENST00000539372 SLC22A25Q6T423 547 aa16.73■□□□□ 0.27
TNFRSF1A-212ENST00000539372 ELOA3Q8NG57 546 aa16.73■□□□□ 0.27
TNFRSF1A-212ENST00000539372 STK35Q8TDR2 534 aa16.73■□□□□ 0.27
TNFRSF1A-212ENST00000539372 KTI12Q96EK9 354 aaPredicted RBP16.73■□□□□ 0.27
TNFRSF1A-212ENST00000539372 MAGEB18Q96M61 343 aa16.73■□□□□ 0.27
TNFRSF1A-212ENST00000539372 TRAF4Q9BUZ4 470 aaPredicted RBP16.73■□□□□ 0.27
TNFRSF1A-212ENST00000539372 PTDSS2Q9BVG9 487 aa16.73■□□□□ 0.27
TNFRSF1A-212ENST00000539372 PRR14Q9BWN1 585 aa16.73■□□□□ 0.27
TNFRSF1A-212ENST00000539372 AMBRA1Q9C0C7 1298 aa16.73■□□□□ 0.27
TNFRSF1A-212ENST00000539372 ALG2Q9H553 416 aa16.73■□□□□ 0.27
TNFRSF1A-212ENST00000539372 SLC17A5Q9NRA2 495 aa16.73■□□□□ 0.27
TNFRSF1A-212ENST00000539372 POU2F3Q9UKI9 436 aa16.73■□□□□ 0.27
TNFRSF1A-212ENST00000539372 E7EQL1 145 aa16.72■□□□□ 0.27
TNFRSF1A-212ENST00000539372 KRT33AO76009 404 aa16.72■□□□□ 0.27
TNFRSF1A-212ENST00000539372 AQP1P29972 269 aa16.72■□□□□ 0.27
TNFRSF1A-212ENST00000539372 TGFBR3Q03167 851 aa16.72■□□□□ 0.27
TNFRSF1A-212ENST00000539372 VEZF1Q14119 521 aa16.72■□□□□ 0.27
TNFRSF1A-212ENST00000539372 CLEC12BQ2HXU8 276 aa16.72■□□□□ 0.27
TNFRSF1A-212ENST00000539372 DHRS4L2Q6PKH6 230 aa16.72■□□□□ 0.27
TNFRSF1A-212ENST00000539372 DLEU7Q6UYE1 221 aa16.72■□□□□ 0.27
TNFRSF1A-212ENST00000539372 CREB3L2Q70SY1 520 aa16.72■□□□□ 0.27
TNFRSF1A-212ENST00000539372 KRT73Q86Y46 540 aa16.72■□□□□ 0.27
TNFRSF1A-212ENST00000539372 KDM8Q8N371 416 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms