RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 ADORA3P0DMS8 318 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 GSTM3P21266 225 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 TBXA2RP21731 343 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 FPR3P25089 353 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 IFNGR2P38484 337 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 FOLR3P41439 243 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 LSM11P83369 360 aaKnown RBP eCLIP8.09□□□□□ -1.11
DDB1-213ENST00000539332 RUNX1T1Q06455 604 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 TSPAN31Q12999 210 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 PTGES3Q15185 160 aaKnown RBP8.09□□□□□ -1.11
DDB1-213ENST00000539332 TMPRSS11AQ6ZMR5 421 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 WDR88Q6ZMY6 472 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 RFPL4BQ6ZWI9 263 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 MBOAT2Q6ZWT7 520 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 CREB3L2Q70SY1 520 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 ZNF550Q7Z398 422 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 CPEB2Q7Z5Q1 589 aaKnown RBP8.09□□□□□ -1.11
DDB1-213ENST00000539332 NRARPQ7Z6K4 114 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 MRGPREQ86SM8 312 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 ZNF440Q8IYI8 595 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 ELMOD2Q8IZ81 293 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 RNF113BQ8IZP6 322 aaKnown RBP8.09□□□□□ -1.11
DDB1-213ENST00000539332 SLC34A3Q8N130 599 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 GDPD1Q8N9F7 314 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 B3GNT7Q8NFL0 401 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 OR4C3Q8NH37 302 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 GNPDA2Q8TDQ7 276 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 C8orf44Q96CB5 159 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 NRSN2Q9GZP1 204 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 SLC25A19Q9HC21 320 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 UBQLN4Q9NRR5 601 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 ZNF226Q9NYT6 803 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 FLRT3Q9NZU0 649 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 C19orf25Q9UFG5 118 aaPredicted RBP8.09□□□□□ -1.11
DDB1-213ENST00000539332 MRTO4Q9UKD2 239 aaKnown RBP8.09□□□□□ -1.11
DDB1-213ENST00000539332 TCFL5Q9UL49 500 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 TBC1D24Q9ULP9 559 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 SLC7A7Q9UM01 511 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 STUB1Q9UNE7 303 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 PRELID1Q9Y255 219 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 IGF2RP11717 2491 aa8.09□□□□□ -1.12
DDB1-213ENST00000539332 CHD8Q9HCK8 2581 aa8.08□□□□□ -1.12
DDB1-213ENST00000539332 DMXL2Q8TDJ6 3036 aa8.08□□□□□ -1.12
DDB1-213ENST00000539332 ANKRD11Q6UB99 2663 aaPredicted RBP8.08□□□□□ -1.12
DDB1-213ENST00000539332 LOC105371267A0A1B0GV96 52 aa8.08□□□□□ -1.12
DDB1-213ENST00000539332 A0A1W2PQD3 144 aa8.08□□□□□ -1.12
DDB1-213ENST00000539332 C21orf140B9A014 251 aa8.08□□□□□ -1.12
DDB1-213ENST00000539332 TERTO14746 1132 aaKnown RBP8.08□□□□□ -1.12
DDB1-213ENST00000539332 SHOXO15266 292 aa8.08□□□□□ -1.12
DDB1-213ENST00000539332 SEC14L5O43304 696 aa8.08□□□□□ -1.12
DDB1-213ENST00000539332 CHP2O43745 196 aa8.08□□□□□ -1.12
DDB1-213ENST00000539332 DXOO77932 396 aaKnown RBP8.08□□□□□ -1.12
DDB1-213ENST00000539332 POU2F1P14859 743 aa8.08□□□□□ -1.12
DDB1-213ENST00000539332 CD82P27701 267 aa8.08□□□□□ -1.12
DDB1-213ENST00000539332 OR3A3P47888 321 aa8.08□□□□□ -1.12
DDB1-213ENST00000539332 RPS18P62269 152 aaKnown RBP8.08□□□□□ -1.12
DDB1-213ENST00000539332 RPS15P62841 145 aaKnown RBP8.08□□□□□ -1.12
DDB1-213ENST00000539332 SMN1Q16637 294 aaKnown RBP8.08□□□□□ -1.12
DDB1-213ENST00000539332 TMEM201Q5SNT2 666 aa8.08□□□□□ -1.12
DDB1-213ENST00000539332 PAPD4Q6PIY7 484 aaKnown RBP8.08□□□□□ -1.12
DDB1-213ENST00000539332 LINC00114Q6XXX2 140 aa8.08□□□□□ -1.12
DDB1-213ENST00000539332 RASSF6Q6ZTQ3 369 aa8.08□□□□□ -1.12
DDB1-213ENST00000539332 SLC29A4Q7RTT9 530 aa8.08□□□□□ -1.12
DDB1-213ENST00000539332 DTX1Q86Y01 620 aa8.08□□□□□ -1.12
DDB1-213ENST00000539332 KIF18BQ86Y91 864 aa8.08□□□□□ -1.12
DDB1-213ENST00000539332 RDH10Q8IZV5 341 aa8.08□□□□□ -1.12
DDB1-213ENST00000539332 CLDN22Q8N7P3 220 aa8.08□□□□□ -1.12
DDB1-213ENST00000539332 ZNF527Q8NB42 609 aa8.08□□□□□ -1.12
DDB1-213ENST00000539332 OR8K3Q8NH51 312 aa8.08□□□□□ -1.12
DDB1-213ENST00000539332 NUBPLQ8TB37 319 aa8.08□□□□□ -1.12
DDB1-213ENST00000539332 PIGXQ8TBF5 258 aa8.08□□□□□ -1.12
DDB1-213ENST00000539332 TMEM255BQ8WV15 326 aa8.08□□□□□ -1.12
DDB1-213ENST00000539332 RNF138Q8WVD3 245 aa8.08□□□□□ -1.12
DDB1-213ENST00000539332 GIMAP1Q8WWP7 306 aa8.08□□□□□ -1.12
DDB1-213ENST00000539332 NKD1Q969G9 470 aa8.08□□□□□ -1.12
DDB1-213ENST00000539332 SDHCQ99643 169 aaPredicted RBP8.08□□□□□ -1.12
DDB1-213ENST00000539332 LPAR4Q99677 370 aa8.08□□□□□ -1.12
DDB1-213ENST00000539332 GPR87Q9BY21 358 aa8.08□□□□□ -1.12
DDB1-213ENST00000539332 TRIM2Q9C040 744 aa8.08□□□□□ -1.12
DDB1-213ENST00000539332 RASSF1Q9NS23 344 aa8.08□□□□□ -1.12
DDB1-213ENST00000539332 RABL2AQ9UBK7 228 aaPredicted RBP8.08□□□□□ -1.12
DDB1-213ENST00000539332 SEC14L4Q9UDX3 406 aa8.08□□□□□ -1.12
DDB1-213ENST00000539332 KCNN3Q9UGI6 736 aa8.08□□□□□ -1.12
DDB1-213ENST00000539332 NUP50Q9UKX7 468 aa8.08□□□□□ -1.12
DDB1-213ENST00000539332 FARSAQ9Y285 508 aaKnown RBP8.08□□□□□ -1.12
DDB1-213ENST00000539332 HS3ST3B1Q9Y662 390 aa8.08□□□□□ -1.12
DDB1-213ENST00000539332 LOC400499M0QZD8 3231 aa8.08□□□□□ -1.12
DDB1-213ENST00000539332 IQCMA0A1B0GVH7 501 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 A0A1B0GWA3 101 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 A6NL46 340 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 ADAM10O14672 748 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 UTS2O95399 124 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 NTN1O95631 604 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 PIPP12273 146 aaPredicted RBP8.07□□□□□ -1.12
DDB1-213ENST00000539332 F8A1P23610 371 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 ABCD3P28288 659 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 TNFSF8P32971 234 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 DLSTP36957 453 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 RBM34P42696 430 aaKnown RBP8.07□□□□□ -1.12
DDB1-213ENST00000539332 RFX3P48380 749 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms