RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 ANKRD46Q86W74 232 aa12.15□□□□□ -0.46
SMARCA4-206ENST00000538456 IFT20Q8IY31 132 aa12.15□□□□□ -0.46
SMARCA4-206ENST00000538456 GSPT2Q8IYD1 628 aaKnown RBP12.15□□□□□ -0.46
SMARCA4-206ENST00000538456 CNPY4Q8N129 248 aa12.15□□□□□ -0.46
SMARCA4-206ENST00000538456 PMM1Q92871 262 aa12.15□□□□□ -0.46
SMARCA4-206ENST00000538456 HPS1Q92902 700 aa12.15□□□□□ -0.46
SMARCA4-206ENST00000538456 TUBGCP3Q96CW5 907 aa12.15□□□□□ -0.46
SMARCA4-206ENST00000538456 DYNLRB1Q9NP97 96 aa12.15□□□□□ -0.46
SMARCA4-206ENST00000538456 OBP2BQ9NPH6 170 aa12.15□□□□□ -0.46
SMARCA4-206ENST00000538456 POLE3Q9NRF9 147 aa12.15□□□□□ -0.46
SMARCA4-206ENST00000538456 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.15□□□□□ -0.46
SMARCA4-206ENST00000538456 ZNF587BE7ETH6 402 aa12.14□□□□□ -0.47
SMARCA4-206ENST00000538456 LYNX1G3V0Z9 82 aa12.14□□□□□ -0.47
SMARCA4-206ENST00000538456 DYNC1I1O14576 645 aa12.14□□□□□ -0.47
SMARCA4-206ENST00000538456 ZNF208O43345 1280 aa12.14□□□□□ -0.47
SMARCA4-206ENST00000538456 NPHS1O60500 1241 aa12.14□□□□□ -0.47
SMARCA4-206ENST00000538456 AGR2O95994 175 aa12.14□□□□□ -0.47
SMARCA4-206ENST00000538456 LYNX1P0DP58 116 aa12.14□□□□□ -0.47
SMARCA4-206ENST00000538456 IFNGR1P15260 489 aa12.14□□□□□ -0.47
SMARCA4-206ENST00000538456 ALDH3A1P30838 453 aa12.14□□□□□ -0.47
SMARCA4-206ENST00000538456 THBS4P35443 961 aa12.14□□□□□ -0.47
SMARCA4-206ENST00000538456 SELENOPP49908 381 aa12.14□□□□□ -0.47
SMARCA4-206ENST00000538456 SPATA21Q7Z572 469 aa12.14□□□□□ -0.47
SMARCA4-206ENST00000538456 MYPOPQ86VE0 399 aaPredicted RBP12.14□□□□□ -0.47
SMARCA4-206ENST00000538456 SEMA6DQ8NFY4 1073 aa12.14□□□□□ -0.47
SMARCA4-206ENST00000538456 MIPOL1Q8TD10 442 aa12.14□□□□□ -0.47
SMARCA4-206ENST00000538456 EPS8L3Q8TE67 593 aaKnown RBP12.14□□□□□ -0.47
SMARCA4-206ENST00000538456 ADPRHL2Q9NX46 363 aa12.14□□□□□ -0.47
SMARCA4-206ENST00000538456 PCDHB14Q9Y5E9 798 aa12.14□□□□□ -0.47
SMARCA4-206ENST00000538456 LIPT2A6NK58 231 aa12.13□□□□□ -0.47
SMARCA4-206ENST00000538456 AQP7P3A6NL99 342 aa12.13□□□□□ -0.47
SMARCA4-206ENST00000538456 RNASET2O00584 256 aaKnown RBP12.13□□□□□ -0.47
SMARCA4-206ENST00000538456 KCNAB3O43448 404 aa12.13□□□□□ -0.47
SMARCA4-206ENST00000538456 SCN2BO60939 215 aa12.13□□□□□ -0.47
SMARCA4-206ENST00000538456 CPSF4O95639 269 aaKnown RBP12.13□□□□□ -0.47
SMARCA4-206ENST00000538456 GPIP06744 558 aa12.13□□□□□ -0.47
SMARCA4-206ENST00000538456 CELA3BP08861 270 aa12.13□□□□□ -0.47
SMARCA4-206ENST00000538456 KHKP50053 298 aa12.13□□□□□ -0.47
SMARCA4-206ENST00000538456 HGFACQ04756 655 aa12.13□□□□□ -0.47
SMARCA4-206ENST00000538456 ADRM1Q16186 407 aa12.13□□□□□ -0.47
SMARCA4-206ENST00000538456 LINGO2Q7L985 606 aa12.13□□□□□ -0.47
SMARCA4-206ENST00000538456 CDK20Q8IZL9 346 aa12.13□□□□□ -0.47
SMARCA4-206ENST00000538456 ZNF786Q8N393 782 aa12.13□□□□□ -0.47
SMARCA4-206ENST00000538456 C3orf56Q8N813 242 aa12.13□□□□□ -0.47
SMARCA4-206ENST00000538456 OR4F15Q8NGB8 312 aa12.13□□□□□ -0.47
SMARCA4-206ENST00000538456 UBASH3BQ8TF42 649 aa12.13□□□□□ -0.47
SMARCA4-206ENST00000538456 WDR60Q8WVS4 1066 aa12.13□□□□□ -0.47
SMARCA4-206ENST00000538456 NEU4Q8WWR8 484 aaPredicted RBP12.13□□□□□ -0.47
SMARCA4-206ENST00000538456 OIT3Q8WWZ8 545 aa12.13□□□□□ -0.47
SMARCA4-206ENST00000538456 BCL2L2Q92843 193 aaPredicted RBP12.13□□□□□ -0.47
SMARCA4-206ENST00000538456 BOD1Q96IK1 185 aa12.13□□□□□ -0.47
SMARCA4-206ENST00000538456 SF3B5Q9BWJ5 86 aaKnown RBP12.13□□□□□ -0.47
SMARCA4-206ENST00000538456 SAP130Q9H0E3 1048 aa12.13□□□□□ -0.47
SMARCA4-206ENST00000538456 TPK1Q9H3S4 243 aa12.13□□□□□ -0.47
SMARCA4-206ENST00000538456 NARFLQ9H6Q4 476 aa12.13□□□□□ -0.47
SMARCA4-206ENST00000538456 LPAR2Q9HBW0 351 aa12.13□□□□□ -0.47
SMARCA4-206ENST00000538456 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.13□□□□□ -0.47
SMARCA4-206ENST00000538456 V9GYY5 206 aaPredicted RBP12.13□□□□□ -0.47
SMARCA4-206ENST00000538456 ARPC4-TTLL3A0A0A6YYG9 625 aa12.12□□□□□ -0.47
SMARCA4-206ENST00000538456 PRAMEF27A3QJZ7 478 aa12.12□□□□□ -0.47
SMARCA4-206ENST00000538456 IGLV1-44P01699 117 aa12.12□□□□□ -0.47
SMARCA4-206ENST00000538456 C1QCP02747 245 aa12.12□□□□□ -0.47
SMARCA4-206ENST00000538456 GUSBP08236 651 aa12.12□□□□□ -0.47
SMARCA4-206ENST00000538456 EGR1P18146 543 aa12.12□□□□□ -0.47
SMARCA4-206ENST00000538456 NPR2P20594 1047 aa12.12□□□□□ -0.47
SMARCA4-206ENST00000538456 PCMT1P22061 227 aa12.12□□□□□ -0.47
SMARCA4-206ENST00000538456 ARRB2P32121 409 aa12.12□□□□□ -0.47
SMARCA4-206ENST00000538456 CHI3L1P36222 383 aaPredicted RBP12.12□□□□□ -0.47
SMARCA4-206ENST00000538456 DVL1P1P54792 670 aaPredicted RBP12.12□□□□□ -0.47
SMARCA4-206ENST00000538456 CLDN8P56748 225 aa12.12□□□□□ -0.47
SMARCA4-206ENST00000538456 IL1RL1Q01638 556 aa12.12□□□□□ -0.47
SMARCA4-206ENST00000538456 RIN1Q13671 783 aa12.12□□□□□ -0.47
SMARCA4-206ENST00000538456 TMEM225Q6GV28 225 aa12.12□□□□□ -0.47
SMARCA4-206ENST00000538456 NIPAL3Q6P499 406 aa12.12□□□□□ -0.47
SMARCA4-206ENST00000538456 GLCCI1Q86VQ1 547 aa12.12□□□□□ -0.47
SMARCA4-206ENST00000538456 HOMEZQ8IX15 550 aa12.12□□□□□ -0.47
SMARCA4-206ENST00000538456 NUP37Q8NFH4 326 aa12.12□□□□□ -0.47
SMARCA4-206ENST00000538456 UBLCP1Q8WVY7 318 aaPredicted RBP12.12□□□□□ -0.47
SMARCA4-206ENST00000538456 CKAP2Q8WWK9 683 aa12.12□□□□□ -0.47
SMARCA4-206ENST00000538456 PPP1R36Q96LQ0 422 aa12.12□□□□□ -0.47
SMARCA4-206ENST00000538456 DOK1Q99704 481 aa12.12□□□□□ -0.47
SMARCA4-206ENST00000538456 RHOXF2Q9BQY4 288 aa12.12□□□□□ -0.47
SMARCA4-206ENST00000538456 NELFAQ9H3P2 528 aa12.12□□□□□ -0.47
SMARCA4-206ENST00000538456 ZNF442Q9H7R0 627 aa12.12□□□□□ -0.47
SMARCA4-206ENST00000538456 NOP53Q9NZM5 478 aaKnown RBP12.12□□□□□ -0.47
SMARCA4-206ENST00000538456 CRNNQ9UBG3 495 aaPredicted RBP12.12□□□□□ -0.47
SMARCA4-206ENST00000538456 ZDHHC2Q9UIJ5 367 aa12.12□□□□□ -0.47
SMARCA4-206ENST00000538456 A0A0A6YYJ9 748 aa12.11□□□□□ -0.47
SMARCA4-206ENST00000538456 CFAP73A6NFT4 308 aa12.11□□□□□ -0.47
SMARCA4-206ENST00000538456 OR6C65A6NJZ3 312 aa12.11□□□□□ -0.47
SMARCA4-206ENST00000538456 SLCO1B7G3V0H7 640 aa12.11□□□□□ -0.47
SMARCA4-206ENST00000538456 UPK3AO75631 287 aa12.11□□□□□ -0.47
SMARCA4-206ENST00000538456 ADRA2AP08913 450 aa12.11□□□□□ -0.47
SMARCA4-206ENST00000538456 UQCRC2P22695 453 aa12.11□□□□□ -0.47
SMARCA4-206ENST00000538456 CXCR1P25024 350 aa12.11□□□□□ -0.47
SMARCA4-206ENST00000538456 ROR2Q01974 943 aaKnown RBP12.11□□□□□ -0.47
SMARCA4-206ENST00000538456 NPRL3Q12980 569 aa12.11□□□□□ -0.47
SMARCA4-206ENST00000538456 BNIP2Q12982 314 aa12.11□□□□□ -0.47
SMARCA4-206ENST00000538456 AP1ARQ63HQ0 302 aa12.11□□□□□ -0.47
SMARCA4-206ENST00000538456 SAXO2Q658L1 398 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms