RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 APOOLQ6UXV4 268 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 SLC35D2Q76EJ3 337 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 UBQLNLQ8IYU4 475 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 RNF113BQ8IZP6 322 aaKnown RBP7.98□□□□□ -1.13
UBE3B-208ENST00000538070 SIX5Q8N196 739 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 DNAAF1Q8NEP3 725 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 OR52N1Q8NH53 320 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 HSD17B8Q92506 261 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 G6PC3Q9BUM1 346 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 TBL1XR1Q9BZK7 514 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 TSPAN10Q9H1Z9 355 aaPredicted RBP7.98□□□□□ -1.13
UBE3B-208ENST00000538070 MYEF2Q9P2K5 600 aaKnown RBP7.98□□□□□ -1.13
UBE3B-208ENST00000538070 ZNF222Q9UK12 451 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 COPS3Q9UNS2 423 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 HTR3EA5X5Y0 456 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 AK1P00568 194 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 SYPP08247 313 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 RAB3BP20337 219 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 TACR3P29371 465 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 LIMK1P53667 647 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 GLYR1Q49A26 553 aaPredicted RBP7.97□□□□□ -1.13
UBE3B-208ENST00000538070 BCL2L15Q5TBC7 163 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 VASNQ6EMK4 673 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 ARHGAP11AQ6P4F7 1023 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 ZNF613Q6PF04 617 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 LANCL3Q6ZV70 420 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 NANOGNBQ7Z5D8 188 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 GDPD1Q8N9F7 314 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 DNAJA4Q8WW22 397 aaPredicted RBP7.97□□□□□ -1.13
UBE3B-208ENST00000538070 ASB12Q8WXK4 309 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 FGF11Q92914 225 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 TCTN2Q96GX1 697 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 DERL3Q96Q80 235 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 MED17Q9NVC6 651 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 C14orf105Q9NVL8 296 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 MCUBQ9NWR8 336 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 SATB2Q9UPW6 733 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 ICOSLGO75144 302 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 SLC25A12O75746 678 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 UTS2O95399 124 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 MAS1P04201 325 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 F8A1P23610 371 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 CXCR1P25024 350 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 MAGEA8P43361 318 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 EVX1P49640 407 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.97□□□□□ -1.13
UBE3B-208ENST00000538070 SLC25A30Q5SVS4 291 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 ZNF362Q5T0B9 420 aaPredicted RBP7.97□□□□□ -1.13
UBE3B-208ENST00000538070 TMPRSS11FQ6ZWK6 438 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 LINGO2Q7L985 606 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 TIGD4Q8IY51 512 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 UXS1Q8NBZ7 420 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 LSM14AQ8ND56 463 aaKnown RBP7.97□□□□□ -1.13
UBE3B-208ENST00000538070 KTI12Q96EK9 354 aaPredicted RBP7.97□□□□□ -1.13
UBE3B-208ENST00000538070 TMEM246Q9BRR3 403 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 ERVMER34-1Q9H9K5 563 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 FKRPQ9H9S5 495 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 ZMIZ1Q9ULJ6 1067 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 EXOGQ9Y2C4 368 aaKnown RBP7.97□□□□□ -1.13
UBE3B-208ENST00000538070 PCDHGB2Q9Y5G2 931 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 NDUFB5O43674 189 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 UBL4AP11441 157 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 ARFIP1P53367 373 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 LGALS3BPQ08380 585 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 MRPL28Q13084 256 aaKnown RBP7.97□□□□□ -1.13
UBE3B-208ENST00000538070 ALG10Q5BKT4 473 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 SFRP4Q6FHJ7 346 aaPredicted RBP7.97□□□□□ -1.13
UBE3B-208ENST00000538070 LRRC69Q6ZNQ3 347 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 ZNF595Q8IYB9 648 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 KISS1RQ969F8 398 aaPredicted RBP7.97□□□□□ -1.13
UBE3B-208ENST00000538070 CTHRC1Q96CG8 243 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 THAP7Q9BT49 309 aaPredicted RBP7.97□□□□□ -1.13
UBE3B-208ENST00000538070 OR11A1Q9GZK7 315 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 HOXD1Q9GZZ0 328 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 TMEM185BQ9H7F4 350 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 GRHPRQ9UBQ7 328 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 ALG5Q9Y673 324 aa7.97□□□□□ -1.13
UBE3B-208ENST00000538070 MUC3AQ02505 3323 aa7.96□□□□□ -1.13
UBE3B-208ENST00000538070 INMT-MINDY4F8WBC2 141 aa7.96□□□□□ -1.13
UBE3B-208ENST00000538070 SRPX2O60687 465 aaPredicted RBP7.96□□□□□ -1.13
UBE3B-208ENST00000538070 OR6A2O95222 327 aa7.96□□□□□ -1.13
UBE3B-208ENST00000538070 IGHA1P01876 353 aa7.96□□□□□ -1.13
UBE3B-208ENST00000538070 FOLR1P15328 257 aa7.96□□□□□ -1.13
UBE3B-208ENST00000538070 BCKDHBP21953 392 aa7.96□□□□□ -1.13
UBE3B-208ENST00000538070 CDKN2AP42771 156 aaKnown RBP7.96□□□□□ -1.13
UBE3B-208ENST00000538070 EIF1AXP47813 144 aaKnown RBP7.96□□□□□ -1.13
UBE3B-208ENST00000538070 GPR143P51810 404 aa7.96□□□□□ -1.13
UBE3B-208ENST00000538070 FBXW4P57775 412 aa7.96□□□□□ -1.13
UBE3B-208ENST00000538070 SNTA1Q13424 505 aa7.96□□□□□ -1.13
UBE3B-208ENST00000538070 GPR50Q13585 617 aa7.96□□□□□ -1.13
UBE3B-208ENST00000538070 DPY19L4Q7Z388 723 aa7.96□□□□□ -1.13
UBE3B-208ENST00000538070 TDHQ8IZJ6 230 aa7.96□□□□□ -1.13
UBE3B-208ENST00000538070 OR6C4Q8NGE1 309 aa7.96□□□□□ -1.13
UBE3B-208ENST00000538070 C3orf49Q96BT1 292 aa7.96□□□□□ -1.13
UBE3B-208ENST00000538070 PELI1Q96FA3 418 aa7.96□□□□□ -1.13
UBE3B-208ENST00000538070 SYT4Q9H2B2 425 aa7.96□□□□□ -1.13
UBE3B-208ENST00000538070 NOX4Q9NPH5 578 aa7.96□□□□□ -1.13
UBE3B-208ENST00000538070 VDAC3Q9Y277 283 aa7.96□□□□□ -1.13
UBE3B-208ENST00000538070 RNF215Q9Y6U7 377 aa7.96□□□□□ -1.13
UBE3B-208ENST00000538070 DMDP11532 3685 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms