RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 MPP4Q96JB8 637 aa10.77□□□□□ -0.69
CHD4-203ENST00000535717 ZNF426Q9BUY5 554 aa10.77□□□□□ -0.69
CHD4-203ENST00000535717 NDUFAF4Q9P032 175 aa10.77□□□□□ -0.69
CHD4-203ENST00000535717 SLC7A8Q9UHI5 535 aa10.77□□□□□ -0.69
CHD4-203ENST00000535717 CLEC4AQ9UMR7 237 aa10.77□□□□□ -0.69
CHD4-203ENST00000535717 INTS1Q8N201 2190 aaKnown RBP10.77□□□□□ -0.69
CHD4-203ENST00000535717 PTPN13Q12923 2485 aa10.77□□□□□ -0.69
CHD4-203ENST00000535717 ADGRG4Q8IZF6 3080 aa10.76□□□□□ -0.69
CHD4-203ENST00000535717 FTCDNL1E5RQL4 147 aa10.76□□□□□ -0.69
CHD4-203ENST00000535717 H0YHG0 523 aa10.76□□□□□ -0.69
CHD4-203ENST00000535717 EIF1BO60739 113 aaKnown RBP10.76□□□□□ -0.69
CHD4-203ENST00000535717 CYTIPO60759 359 aa10.76□□□□□ -0.69
CHD4-203ENST00000535717 RAMP1O60894 148 aa10.76□□□□□ -0.69
CHD4-203ENST00000535717 TNFSF13O75888 250 aa10.76□□□□□ -0.69
CHD4-203ENST00000535717 CRHP06850 196 aa10.76□□□□□ -0.69
CHD4-203ENST00000535717 BMP5P22003 454 aa10.76□□□□□ -0.69
CHD4-203ENST00000535717 KIR2DL2P43627 348 aaPredicted RBP10.76□□□□□ -0.69
CHD4-203ENST00000535717 ST3GAL3Q11203 375 aa10.76□□□□□ -0.69
CHD4-203ENST00000535717 RNPS1Q15287 305 aaKnown RBP10.76□□□□□ -0.69
CHD4-203ENST00000535717 SNCBQ16143 134 aa10.76□□□□□ -0.69
CHD4-203ENST00000535717 TTC33Q6PID6 262 aaPredicted RBP10.76□□□□□ -0.69
CHD4-203ENST00000535717 C5orf46Q6UWT4 87 aa10.76□□□□□ -0.69
CHD4-203ENST00000535717 CCDC103Q8IW40 242 aa10.76□□□□□ -0.69
CHD4-203ENST00000535717 OFCC1Q8IZS5 231 aa10.76□□□□□ -0.69
CHD4-203ENST00000535717 SLC43A2Q8N370 569 aa10.76□□□□□ -0.69
CHD4-203ENST00000535717 CA5BP1Q8WTZ4 195 aa10.76□□□□□ -0.69
CHD4-203ENST00000535717 TMEM255BQ8WV15 326 aa10.76□□□□□ -0.69
CHD4-203ENST00000535717 SLC25A36Q96CQ1 311 aa10.76□□□□□ -0.69
CHD4-203ENST00000535717 ZHX1-C8orf76Q96EF9 292 aa10.76□□□□□ -0.69
CHD4-203ENST00000535717 GMPPAQ96IJ6 420 aaPredicted RBP10.76□□□□□ -0.69
CHD4-203ENST00000535717 ZNF300Q96RE9 604 aaPredicted RBP10.76□□□□□ -0.69
CHD4-203ENST00000535717 SEPHS2Q99611 448 aa10.76□□□□□ -0.69
CHD4-203ENST00000535717 FNDC11Q9BVV2 318 aa10.76□□□□□ -0.69
CHD4-203ENST00000535717 TAPBPLQ9BX59 468 aa10.76□□□□□ -0.69
CHD4-203ENST00000535717 UCK2Q9BZX2 261 aa10.76□□□□□ -0.69
CHD4-203ENST00000535717 MAN2C1Q9NTJ4 1040 aa10.76□□□□□ -0.69
CHD4-203ENST00000535717 ZNF629Q9UEG4 869 aaPredicted RBP10.76□□□□□ -0.69
CHD4-203ENST00000535717 ING1Q9UK53 422 aaPredicted RBP10.76□□□□□ -0.69
CHD4-203ENST00000535717 POMPQ9Y244 141 aa10.76□□□□□ -0.69
CHD4-203ENST00000535717 DOPEY2Q9Y3R5 2298 aa10.75□□□□□ -0.69
CHD4-203ENST00000535717 FAM90A27PA6NNH2 459 aa10.75□□□□□ -0.69
CHD4-203ENST00000535717 LRRN3E7EW58 273 aa10.75□□□□□ -0.69
CHD4-203ENST00000535717 KPNA4O00629 521 aaPredicted RBP10.75□□□□□ -0.69
CHD4-203ENST00000535717 DVL2O14641 736 aa10.75□□□□□ -0.69
CHD4-203ENST00000535717 OR2T1O43869 369 aa10.75□□□□□ -0.69
CHD4-203ENST00000535717 FZD7O75084 574 aa10.75□□□□□ -0.69
CHD4-203ENST00000535717 SS18L1O75177 396 aaPredicted RBP10.75□□□□□ -0.69
CHD4-203ENST00000535717 DIRAS1O95057 198 aa10.75□□□□□ -0.69
CHD4-203ENST00000535717 AKR7A3O95154 331 aa10.75□□□□□ -0.69
CHD4-203ENST00000535717 CLDN14O95500 239 aa10.75□□□□□ -0.69
CHD4-203ENST00000535717 STAMBPO95630 424 aa10.75□□□□□ -0.69
CHD4-203ENST00000535717 IL18BPO95998 194 aa10.75□□□□□ -0.69
CHD4-203ENST00000535717 PLGP00747 810 aaPredicted RBP10.75□□□□□ -0.69
CHD4-203ENST00000535717 BGLAPP02818 100 aa10.75□□□□□ -0.69
CHD4-203ENST00000535717 RHCEP18577 417 aa10.75□□□□□ -0.69
CHD4-203ENST00000535717 IFNA8P32881 189 aa10.75□□□□□ -0.69
CHD4-203ENST00000535717 OPRM1P35372 400 aa10.75□□□□□ -0.69
CHD4-203ENST00000535717 RBM34P42696 430 aaKnown RBP10.75□□□□□ -0.69
CHD4-203ENST00000535717 P2RY4P51582 365 aa10.75□□□□□ -0.69
CHD4-203ENST00000535717 UGT2B15P54855 530 aa10.75□□□□□ -0.69
CHD4-203ENST00000535717 SIRPAP78324 504 aa10.75□□□□□ -0.69
CHD4-203ENST00000535717 LTBQ06643 244 aa10.75□□□□□ -0.69
CHD4-203ENST00000535717 RASGEF1BQ0VAM2 473 aa10.75□□□□□ -0.69
CHD4-203ENST00000535717 RIPK1Q13546 671 aa10.75□□□□□ -0.69
CHD4-203ENST00000535717 FLOT2Q14254 428 aa10.75□□□□□ -0.69
CHD4-203ENST00000535717 FAM69AQ5T7M9 428 aa10.75□□□□□ -0.69
CHD4-203ENST00000535717 GTF2IRD2BQ6EKJ0 949 aa10.75□□□□□ -0.69
CHD4-203ENST00000535717 ABLIM2Q6H8Q1 611 aa10.75□□□□□ -0.69
CHD4-203ENST00000535717 VWA1Q6PCB0 445 aa10.75□□□□□ -0.69
CHD4-203ENST00000535717 PAQR6Q6TCH4 344 aa10.75□□□□□ -0.69
CHD4-203ENST00000535717 FAM214BQ7L5A3 538 aa10.75□□□□□ -0.69
CHD4-203ENST00000535717 GTF2IRD2Q86UP8 949 aa10.75□□□□□ -0.69
CHD4-203ENST00000535717 CYP4Z1Q86W10 505 aa10.75□□□□□ -0.69
CHD4-203ENST00000535717 MCEMP1Q8IX19 187 aa10.75□□□□□ -0.69
CHD4-203ENST00000535717 TMEM99Q8N816 258 aa10.75□□□□□ -0.69
CHD4-203ENST00000535717 CNEP1R1Q8N9A8 125 aa10.75□□□□□ -0.69
CHD4-203ENST00000535717 RELL2Q8NC24 303 aaPredicted RBP10.75□□□□□ -0.69
CHD4-203ENST00000535717 PIK3C3Q8NEB9 887 aa10.75□□□□□ -0.69
CHD4-203ENST00000535717 OR6S1Q8NH40 331 aa10.75□□□□□ -0.69
CHD4-203ENST00000535717 TMEM239Q8WW34 195 aa10.75□□□□□ -0.69
CHD4-203ENST00000535717 STARD4Q96DR4 205 aa10.75□□□□□ -0.69
CHD4-203ENST00000535717 LRGUKQ96M69 825 aa10.75□□□□□ -0.69
CHD4-203ENST00000535717 MOGAT1Q96PD6 335 aa10.75□□□□□ -0.69
CHD4-203ENST00000535717 EPYCQ99645 322 aa10.75□□□□□ -0.69
CHD4-203ENST00000535717 PSD2Q9BQI7 771 aa10.75□□□□□ -0.69
CHD4-203ENST00000535717 NAA11Q9BSU3 229 aaPredicted RBP10.75□□□□□ -0.69
CHD4-203ENST00000535717 SFXN3Q9BWM7 321 aa10.75□□□□□ -0.69
CHD4-203ENST00000535717 SLC19A3Q9BZV2 496 aa10.75□□□□□ -0.69
CHD4-203ENST00000535717 TRIM15Q9C019 465 aa10.75□□□□□ -0.69
CHD4-203ENST00000535717 MMADHCQ9H3L0 296 aaPredicted RBP10.75□□□□□ -0.69
CHD4-203ENST00000535717 NMNAT1Q9HAN9 279 aaPredicted RBP10.75□□□□□ -0.69
CHD4-203ENST00000535717 IL1RAPQ9NPH3 570 aa10.75□□□□□ -0.69
CHD4-203ENST00000535717 MEPEQ9NQ76 525 aaPredicted RBP10.75□□□□□ -0.69
CHD4-203ENST00000535717 GLRX2Q9NS18 164 aa10.75□□□□□ -0.69
CHD4-203ENST00000535717 KLHL13Q9P2N7 655 aa10.75□□□□□ -0.69
CHD4-203ENST00000535717 SEC14L4Q9UDX3 406 aa10.75□□□□□ -0.69
CHD4-203ENST00000535717 FAM32AQ9Y421 112 aaKnown RBP10.75□□□□□ -0.69
CHD4-203ENST00000535717 HECTD1Q9ULT8 2610 aa10.74□□□□□ -0.69
CHD4-203ENST00000535717 NKX2-6A6NCS4 301 aa10.74□□□□□ -0.69
CHD4-203ENST00000535717 AQP7P3A6NL99 342 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms