RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 CD247P20963 164 aa11.88□□□□□ -0.51
CAPN1-227ENST00000533909 PRDX6P30041 224 aa11.88□□□□□ -0.51
CAPN1-227ENST00000533909 RPS5P46782 204 aaKnown RBP11.88□□□□□ -0.51
CAPN1-227ENST00000533909 OR3A2P47893 321 aa11.88□□□□□ -0.51
CAPN1-227ENST00000533909 GZMMP51124 257 aa11.88□□□□□ -0.51
CAPN1-227ENST00000533909 SLC7A2P52569 658 aa11.88□□□□□ -0.51
CAPN1-227ENST00000533909 SLC16A1P53985 500 aa11.88□□□□□ -0.51
CAPN1-227ENST00000533909 KRTAP10-9P60411 292 aa11.88□□□□□ -0.51
CAPN1-227ENST00000533909 LIPEQ05469 1076 aa11.88□□□□□ -0.51
CAPN1-227ENST00000533909 NRF1Q16656 503 aa11.88□□□□□ -0.51
CAPN1-227ENST00000533909 SWT1Q5T5J6 900 aaKnown RBP11.88□□□□□ -0.51
CAPN1-227ENST00000533909 C6orf89Q6UWU4 347 aa11.88□□□□□ -0.51
CAPN1-227ENST00000533909 CASP12Q6UXS9 341 aa11.88□□□□□ -0.51
CAPN1-227ENST00000533909 CCDC80Q76M96 950 aa11.88□□□□□ -0.51
CAPN1-227ENST00000533909 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.88□□□□□ -0.51
CAPN1-227ENST00000533909 CDH24Q86UP0 819 aa11.88□□□□□ -0.51
CAPN1-227ENST00000533909 CXorf67Q86X51 503 aaPredicted RBP11.88□□□□□ -0.51
CAPN1-227ENST00000533909 MICU2Q8IYU8 434 aa11.88□□□□□ -0.51
CAPN1-227ENST00000533909 TMEM99Q8N816 258 aa11.88□□□□□ -0.51
CAPN1-227ENST00000533909 MFSD8Q8NHS3 518 aa11.88□□□□□ -0.51
CAPN1-227ENST00000533909 LZICQ8WZA0 190 aa11.88□□□□□ -0.51
CAPN1-227ENST00000533909 KISS1RQ969F8 398 aaPredicted RBP11.88□□□□□ -0.51
CAPN1-227ENST00000533909 MYLK2Q9H1R3 596 aa11.88□□□□□ -0.51
CAPN1-227ENST00000533909 RASSF1Q9NS23 344 aa11.88□□□□□ -0.51
CAPN1-227ENST00000533909 GPR52Q9Y2T5 361 aa11.88□□□□□ -0.51
CAPN1-227ENST00000533909 SH3GLB1Q9Y371 365 aa11.88□□□□□ -0.51
CAPN1-227ENST00000533909 ABCA4P78363 2273 aa11.88□□□□□ -0.51
CAPN1-227ENST00000533909 TRAV36DV7A0A075B6V5 113 aa11.87□□□□□ -0.51
CAPN1-227ENST00000533909 A0A0B4J2E0 115 aa11.87□□□□□ -0.51
CAPN1-227ENST00000533909 A0A1B0GX12 115 aa11.87□□□□□ -0.51
CAPN1-227ENST00000533909 AQP7P3A6NL99 342 aa11.87□□□□□ -0.51
CAPN1-227ENST00000533909 ZNF716A6NP11 495 aa11.87□□□□□ -0.51
CAPN1-227ENST00000533909 GMNNO75496 209 aa11.87□□□□□ -0.51
CAPN1-227ENST00000533909 GCM2O75603 506 aaPredicted RBP11.87□□□□□ -0.51
CAPN1-227ENST00000533909 H3F3AP84243 136 aa11.87□□□□□ -0.51
CAPN1-227ENST00000533909 C1DQ13901 141 aaKnown RBP11.87□□□□□ -0.51
CAPN1-227ENST00000533909 POU4F3Q15319 338 aa11.87□□□□□ -0.51
CAPN1-227ENST00000533909 CYBRD1Q53TN4 286 aa11.87□□□□□ -0.51
CAPN1-227ENST00000533909 GKAP1Q5VSY0 366 aaPredicted RBP11.87□□□□□ -0.51
CAPN1-227ENST00000533909 ZNF613Q6PF04 617 aa11.87□□□□□ -0.51
CAPN1-227ENST00000533909 HACD2Q6Y1H2 254 aa11.87□□□□□ -0.51
CAPN1-227ENST00000533909 STAC2Q6ZMT1 411 aa11.87□□□□□ -0.51
CAPN1-227ENST00000533909 Q6ZT83 130 aa11.87□□□□□ -0.51
CAPN1-227ENST00000533909 P3H2Q8IVL5 708 aa11.87□□□□□ -0.51
CAPN1-227ENST00000533909 GPR32P1Q8NGA4 272 aa11.87□□□□□ -0.51
CAPN1-227ENST00000533909 OR6T1Q8NGN1 323 aa11.87□□□□□ -0.51
CAPN1-227ENST00000533909 KTI12Q96EK9 354 aaPredicted RBP11.87□□□□□ -0.51
CAPN1-227ENST00000533909 TPD52L3Q96J77 140 aa11.87□□□□□ -0.51
CAPN1-227ENST00000533909 KCTD14Q9BQ13 255 aaPredicted RBP11.87□□□□□ -0.51
CAPN1-227ENST00000533909 SF3B5Q9BWJ5 86 aaKnown RBP11.87□□□□□ -0.51
CAPN1-227ENST00000533909 CMTM6Q9NX76 183 aa11.87□□□□□ -0.51
CAPN1-227ENST00000533909 UPB1Q9UBR1 384 aa11.87□□□□□ -0.51
CAPN1-227ENST00000533909 ING1Q9UK53 422 aaPredicted RBP11.87□□□□□ -0.51
CAPN1-227ENST00000533909 USP22Q9UPT9 525 aa11.87□□□□□ -0.51
CAPN1-227ENST00000533909 RASD1Q9Y272 281 aa11.87□□□□□ -0.51
CAPN1-227ENST00000533909 AKAP6Q13023 2319 aa11.87□□□□□ -0.51
CAPN1-227ENST00000533909 TRAPPC13A5PLN9 417 aa11.86□□□□□ -0.51
CAPN1-227ENST00000533909 ZNF814B7Z6K7 855 aa11.86□□□□□ -0.51
CAPN1-227ENST00000533909 RAMP1O60894 148 aa11.86□□□□□ -0.51
CAPN1-227ENST00000533909 NPIPB7O75200 414 aa11.86□□□□□ -0.51
CAPN1-227ENST00000533909 KRT33AO76009 404 aa11.86□□□□□ -0.51
CAPN1-227ENST00000533909 CNOT4O95628 575 aaKnown RBP11.86□□□□□ -0.51
CAPN1-227ENST00000533909 IGHV3-9P01782 118 aa11.86□□□□□ -0.51
CAPN1-227ENST00000533909 NQO1P15559 274 aaKnown RBP11.86□□□□□ -0.51
CAPN1-227ENST00000533909 PSMB1P20618 241 aaKnown RBP11.86□□□□□ -0.51
CAPN1-227ENST00000533909 CCKARP32238 428 aa11.86□□□□□ -0.51
CAPN1-227ENST00000533909 IFNA8P32881 189 aa11.86□□□□□ -0.51
CAPN1-227ENST00000533909 KDELR2P33947 212 aa11.86□□□□□ -0.51
CAPN1-227ENST00000533909 CDH12P55289 794 aa11.86□□□□□ -0.51
CAPN1-227ENST00000533909 PSME3P61289 254 aa11.86□□□□□ -0.51
CAPN1-227ENST00000533909 MXRA7P84157 204 aa11.86□□□□□ -0.51
CAPN1-227ENST00000533909 ITGADQ13349 1161 aa11.86□□□□□ -0.51
CAPN1-227ENST00000533909 SLC17A1Q14916 467 aa11.86□□□□□ -0.51
CAPN1-227ENST00000533909 MFSD13AQ14CX5 517 aa11.86□□□□□ -0.51
CAPN1-227ENST00000533909 ENTPD8Q5MY95 495 aa11.86□□□□□ -0.51
CAPN1-227ENST00000533909 FAM69AQ5T7M9 428 aa11.86□□□□□ -0.51
CAPN1-227ENST00000533909 FBXW9Q5XUX1 488 aa11.86□□□□□ -0.51
CAPN1-227ENST00000533909 DEF8Q6ZN54 512 aa11.86□□□□□ -0.51
CAPN1-227ENST00000533909 BHLHA15Q7RTS1 189 aaPredicted RBP11.86□□□□□ -0.51
CAPN1-227ENST00000533909 PIGWQ7Z7B1 504 aa11.86□□□□□ -0.51
CAPN1-227ENST00000533909 LSRQ86X29 649 aaPredicted RBP11.86□□□□□ -0.51
CAPN1-227ENST00000533909 CARM1Q86X55 608 aa11.86□□□□□ -0.51
CAPN1-227ENST00000533909 WFDC8Q8IUA0 241 aa11.86□□□□□ -0.51
CAPN1-227ENST00000533909 SLC15A3Q8IY34 581 aa11.86□□□□□ -0.51
CAPN1-227ENST00000533909 GABRG1Q8N1C3 465 aa11.86□□□□□ -0.51
CAPN1-227ENST00000533909 OR9K2Q8NGE7 335 aa11.86□□□□□ -0.51
CAPN1-227ENST00000533909 S100PBPQ96BU1 408 aa11.86□□□□□ -0.51
CAPN1-227ENST00000533909 PIK3IP1Q96FE7 263 aa11.86□□□□□ -0.51
CAPN1-227ENST00000533909 CCT8L2Q96SF2 557 aa11.86□□□□□ -0.51
CAPN1-227ENST00000533909 USB1Q9BQ65 265 aaKnown RBP11.86□□□□□ -0.51
CAPN1-227ENST00000533909 ASPNQ9BXN1 380 aa11.86□□□□□ -0.51
CAPN1-227ENST00000533909 RSPO3Q9BXY4 272 aaPredicted RBP11.86□□□□□ -0.51
CAPN1-227ENST00000533909 ALG2Q9H553 416 aa11.86□□□□□ -0.51
CAPN1-227ENST00000533909 SPAG4Q9NPE6 437 aa11.86□□□□□ -0.51
CAPN1-227ENST00000533909 NGBQ9NPG2 151 aa11.86□□□□□ -0.51
CAPN1-227ENST00000533909 ASB6Q9NWX5 421 aa11.86□□□□□ -0.51
CAPN1-227ENST00000533909 ADA2Q9NZK5 511 aa11.86□□□□□ -0.51
CAPN1-227ENST00000533909 PRSS50Q9UI38 385 aa11.86□□□□□ -0.51
CAPN1-227ENST00000533909 FLVCR1Q9Y5Y0 555 aa11.86□□□□□ -0.51
CAPN1-227ENST00000533909 A0A087WUJ7 227 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms