RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 CMAHPQ9Y471 501 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 RNF215Q9Y6U7 377 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 TP53BP1Q12888 1972 aaPredicted RBP5.09□□□□□ -1.6
PCF11-205ENST00000530906 THADAQ6YHU6 1953 aa5.09□□□□□ -1.6
PCF11-205ENST00000530906 TDRD6O60522 2096 aaKnown RBP5.08□□□□□ -1.6
PCF11-205ENST00000530906 IGLV3-12A0A075B6K2 115 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 C12orf71A8MTZ7 269 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 ALG1L2C9J202 215 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 K7ESF4 209 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 PLD2O14939 933 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 ZNF264O43296 627 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 SEC14L5O43304 696 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 PLPP2O43688 288 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 GPRIN2O60269 458 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 SLC19A2O60779 497 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 TXNDC12O95881 172 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 ONECUT2O95948 504 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 MT-ATP6P00846 226 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 IGKV1D-16P01601 117 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 CLPSP04118 112 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 SBK2P0C263 348 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 OR2T7P0C7T2 308 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 RAC2P15153 192 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 NAGAP17050 411 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 MAOAP21397 527 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 TNFSF8P32971 234 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 GRK6P43250 576 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 HTR3AP46098 478 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 PPM1FP49593 454 aaPredicted RBP5.08□□□□□ -1.6
PCF11-205ENST00000530906 PGDP52209 483 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 MAP2K6P52564 334 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 BLVRAP53004 296 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 SLC25A1P53007 311 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 SUMO3P55854 103 aaPredicted RBP5.08□□□□□ -1.6
PCF11-205ENST00000530906 FXYD6P3P58550 94 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 RPS3AP61247 264 aaKnown RBP5.08□□□□□ -1.6
PCF11-205ENST00000530906 BTG2P78543 158 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 SCN1BQ07699 218 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 CRYZQ08257 329 aaKnown RBP5.08□□□□□ -1.6
PCF11-205ENST00000530906 FOXD4Q12950 439 aaPredicted RBP5.08□□□□□ -1.6
PCF11-205ENST00000530906 SKP2Q13309 424 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 EFR3AQ14156 821 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 TBC1D25Q3MII6 688 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 OR2G6Q5TZ20 316 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 STEAP3Q658P3 488 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 SLC6A19Q695T7 634 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 RHBDD2Q6NTF9 364 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 PLBD1Q6P4A8 553 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 TMEM71Q6P5X7 295 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 KIRREL2Q6UWL6 708 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 DGAT2L6Q6ZPD8 337 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 TRILQ7L0X0 811 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 SLC29A4Q7RTT9 530 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 BCDIN3DQ7Z5W3 292 aaKnown RBP5.08□□□□□ -1.6
PCF11-205ENST00000530906 SFTPA2Q8IWL1 248 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 SLC35F3Q8IY50 421 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 ARIH2OSQ8N7S6 290 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 FRMD1Q8N878 549 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 ATP6V1C2Q8NEY4 427 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 OR51G2Q8NGK0 314 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 OR2T27Q8NH04 317 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 OR6S1Q8NH40 331 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 PFN4Q8NHR9 129 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 GRHL3Q8TE85 626 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 PTPMT1Q8WUK0 201 aaPredicted RBP5.08□□□□□ -1.6
PCF11-205ENST00000530906 GATAD2BQ8WXI9 593 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 TM9SF4Q92544 642 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 KISS1RQ969F8 398 aaPredicted RBP5.08□□□□□ -1.6
PCF11-205ENST00000530906 ADIPOR1Q96A54 375 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 C3orf49Q96BT1 292 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 CNN2Q99439 309 aaKnown RBP5.08□□□□□ -1.6
PCF11-205ENST00000530906 ELF4Q99607 663 aaPredicted RBP5.08□□□□□ -1.6
PCF11-205ENST00000530906 ZNF649Q9BS31 505 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 MRI1Q9BV20 369 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 ALG8Q9BVK2 526 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 KRTAP9-3Q9BYQ3 159 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 SPRTNQ9H040 489 aaPredicted RBP5.08□□□□□ -1.6
PCF11-205ENST00000530906 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.08□□□□□ -1.6
PCF11-205ENST00000530906 FKRPQ9H9S5 495 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 MCCC2Q9HCC0 563 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 NRIP3Q9NQ35 241 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 SNTG1Q9NSN8 517 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 C20orf141Q9NUB4 165 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 C2orf42Q9NWW7 574 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 NPAP1Q9NZP6 1156 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 CHRNA9Q9UGM1 479 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 PPIEQ9UNP9 301 aaKnown RBP5.08□□□□□ -1.6
PCF11-205ENST00000530906 NTNG1Q9Y2I2 539 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 SIT1Q9Y3P8 196 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 GRIP1Q9Y3R0 1128 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 PCDHGB2Q9Y5G2 931 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 SLCO1B1Q9Y6L6 691 aa5.08□□□□□ -1.6
PCF11-205ENST00000530906 SPAG17Q6Q759 2223 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 hCG_2014768A0A024R1R8 64 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 NPIPA5A0A0B4J1W7 369 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 TRAV1-2A0A0B4J238 106 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 CCDC182A6NF36 153 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 OR6C70A6NIJ9 312 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 NPIPA7E9PJI5 369 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 GTPBP1O00178 669 aaKnown RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms