RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 SPECC1L-ADORA2AF8WAN1 911 aa3.33□□□□□ -1.88
C11orf88-204ENST00000529661 NDUFS8O00217 210 aa3.33□□□□□ -1.88
C11orf88-204ENST00000529661 RAMP3O60896 148 aa3.33□□□□□ -1.88
C11orf88-204ENST00000529661 AP2A1O95782 977 aa3.33□□□□□ -1.88
C11orf88-204ENST00000529661 TSPAN12O95859 305 aa3.33□□□□□ -1.88
C11orf88-204ENST00000529661 OTCP00480 354 aa3.33□□□□□ -1.88
C11orf88-204ENST00000529661 LGALS2P05162 132 aa3.33□□□□□ -1.88
C11orf88-204ENST00000529661 DDOSTP39656 456 aa3.33□□□□□ -1.88
C11orf88-204ENST00000529661 MAGEA1P43355 309 aa3.33□□□□□ -1.88
C11orf88-204ENST00000529661 SYKP43405 635 aa3.33□□□□□ -1.88
C11orf88-204ENST00000529661 HLCSP50747 726 aa3.33□□□□□ -1.88
C11orf88-204ENST00000529661 PLK1P53350 603 aa3.33□□□□□ -1.88
C11orf88-204ENST00000529661 CRYBB1P53674 252 aaPredicted RBP3.33□□□□□ -1.88
C11orf88-204ENST00000529661 CDH4P55283 916 aa3.33□□□□□ -1.88
C11orf88-204ENST00000529661 RIPPLY3P57055 190 aa3.33□□□□□ -1.88
C11orf88-204ENST00000529661 SEC61GP60059 68 aa3.33□□□□□ -1.88
C11orf88-204ENST00000529661 EIF3EP60228 445 aaKnown RBP3.33□□□□□ -1.88
C11orf88-204ENST00000529661 FBXO48Q5FWF7 155 aa3.33□□□□□ -1.88
C11orf88-204ENST00000529661 SPANXN2Q5MJ10 180 aa3.33□□□□□ -1.88
C11orf88-204ENST00000529661 ACOT7LQ6ZUV0 252 aa3.33□□□□□ -1.88
C11orf88-204ENST00000529661 BZW1Q7L1Q6 419 aaKnown RBP3.33□□□□□ -1.88
C11orf88-204ENST00000529661 CD177Q8N6Q3 437 aa3.33□□□□□ -1.88
C11orf88-204ENST00000529661 SPATA4Q8NEY3 305 aa3.33□□□□□ -1.88
C11orf88-204ENST00000529661 OR56B4Q8NH76 319 aa3.33□□□□□ -1.88
C11orf88-204ENST00000529661 MAGEE2Q8TD90 523 aaPredicted RBP3.33□□□□□ -1.88
C11orf88-204ENST00000529661 TSEN15Q8WW01 171 aaKnown RBP3.33□□□□□ -1.88
C11orf88-204ENST00000529661 HTR3CQ8WXA8 447 aa3.33□□□□□ -1.88
C11orf88-204ENST00000529661 C10orf35Q96D05 121 aa3.33□□□□□ -1.88
C11orf88-204ENST00000529661 TBX15Q96SF7 602 aa3.33□□□□□ -1.88
C11orf88-204ENST00000529661 COPS8Q99627 209 aa3.33□□□□□ -1.88
C11orf88-204ENST00000529661 CHP1Q99653 195 aa3.33□□□□□ -1.88
C11orf88-204ENST00000529661 ZNF184Q99676 751 aaPredicted RBP3.33□□□□□ -1.88
C11orf88-204ENST00000529661 NEK6Q9HC98 313 aa3.33□□□□□ -1.88
C11orf88-204ENST00000529661 ZFP14Q9HCL3 533 aa3.33□□□□□ -1.88
C11orf88-204ENST00000529661 ZNF275Q9NSD4 429 aaPredicted RBP3.33□□□□□ -1.88
C11orf88-204ENST00000529661 ZNHIT6Q9NWK9 470 aaKnown RBP3.33□□□□□ -1.88
C11orf88-204ENST00000529661 ZNF639Q9UID6 485 aa3.33□□□□□ -1.88
C11orf88-204ENST00000529661 KLHL21Q9UJP4 597 aa3.33□□□□□ -1.88
C11orf88-204ENST00000529661 VSIG4Q9Y279 399 aa3.33□□□□□ -1.88
C11orf88-204ENST00000529661 IGHV7-81A0A0B4J1V7 117 aa3.32□□□□□ -1.88
C11orf88-204ENST00000529661 A0A1B0GTQ1 180 aa3.32□□□□□ -1.88
C11orf88-204ENST00000529661 HEATR9A2RTY3 570 aa3.32□□□□□ -1.88
C11orf88-204ENST00000529661 VSTM2BA6NLU5 285 aa3.32□□□□□ -1.88
C11orf88-204ENST00000529661 IDSB3KWA1 339 aa3.32□□□□□ -1.88
C11orf88-204ENST00000529661 TCP11X1B4DZS4 312 aa3.32□□□□□ -1.88
C11orf88-204ENST00000529661 TRDCB7Z8K6 153 aa3.32□□□□□ -1.88
C11orf88-204ENST00000529661 IGHV3-23P01764 117 aa3.32□□□□□ -1.88
C11orf88-204ENST00000529661 KRT6AP02538 564 aa3.32□□□□□ -1.88
C11orf88-204ENST00000529661 OR8U8P0C7N1 319 aa3.32□□□□□ -1.88
C11orf88-204ENST00000529661 PABPC4LP0CB38 370 aaKnown RBP3.32□□□□□ -1.88
C11orf88-204ENST00000529661 KLK2P20151 261 aa3.32□□□□□ -1.88
C11orf88-204ENST00000529661 LEPP41159 167 aa3.32□□□□□ -1.88
C11orf88-204ENST00000529661 P2RY4P51582 365 aa3.32□□□□□ -1.88
C11orf88-204ENST00000529661 CARD18P57730 90 aa3.32□□□□□ -1.88
C11orf88-204ENST00000529661 BCL2L1Q07817 233 aa3.32□□□□□ -1.88
C11orf88-204ENST00000529661 TGM3Q08188 693 aa3.32□□□□□ -1.88
C11orf88-204ENST00000529661 CCDC173Q0VFZ6 552 aa3.32□□□□□ -1.88
C11orf88-204ENST00000529661 GRB7Q14451 532 aa3.32□□□□□ -1.88
C11orf88-204ENST00000529661 LRRC66Q68CR7 880 aa3.32□□□□□ -1.88
C11orf88-204ENST00000529661 WDR74Q6RFH5 385 aaPredicted RBP3.32□□□□□ -1.88
C11orf88-204ENST00000529661 MOB1BQ7L9L4 216 aa3.32□□□□□ -1.88
C11orf88-204ENST00000529661 PPP1R27Q86WC6 154 aa3.32□□□□□ -1.88
C11orf88-204ENST00000529661 COMMD1Q8N668 190 aa3.32□□□□□ -1.88
C11orf88-204ENST00000529661 SPERTQ8NA61 448 aa3.32□□□□□ -1.88
C11orf88-204ENST00000529661 MCUR1Q96AQ8 359 aa3.32□□□□□ -1.88
C11orf88-204ENST00000529661 C11orf70Q9BRQ4 267 aa3.32□□□□□ -1.88
C11orf88-204ENST00000529661 CHRDL1Q9BU40 450 aa3.32□□□□□ -1.88
C11orf88-204ENST00000529661 ABCD2Q9UBJ2 740 aa3.32□□□□□ -1.88
C11orf88-204ENST00000529661 SEC14L3Q9UDX4 400 aa3.32□□□□□ -1.88
C11orf88-204ENST00000529661 SUN2Q9UH99 717 aa3.32□□□□□ -1.88
C11orf88-204ENST00000529661 DCDC2Q9UHG0 476 aa3.32□□□□□ -1.88
C11orf88-204ENST00000529661 IFT52Q9Y366 437 aa3.32□□□□□ -1.88
C11orf88-204ENST00000529661 OBSCNQ5VST9 7968 aa3.32□□□□□ -1.88
C11orf88-204ENST00000529661 ADAMTS9Q9P2N4 1935 aa3.31□□□□□ -1.88
C11orf88-204ENST00000529661 PHLPP2Q6ZVD8 1323 aa3.31□□□□□ -1.88
C11orf88-204ENST00000529661 A0A1B0GVL5 298 aa3.31□□□□□ -1.88
C11orf88-204ENST00000529661 TUBAL3A6NHL2 446 aa3.31□□□□□ -1.88
C11orf88-204ENST00000529661 TBL1XO60907 577 aa3.31□□□□□ -1.88
C11orf88-204ENST00000529661 ATP5LO75964 103 aa3.31□□□□□ -1.88
C11orf88-204ENST00000529661 CLDN9O95484 217 aa3.31□□□□□ -1.88
C11orf88-204ENST00000529661 UBTFL6P0CB48 400 aaPredicted RBP3.31□□□□□ -1.88
C11orf88-204ENST00000529661 ZNF853P0CG23 659 aa3.31□□□□□ -1.88
C11orf88-204ENST00000529661 DUX4L4P0CJ87 422 aa3.31□□□□□ -1.88
C11orf88-204ENST00000529661 CCDC166P0CW27 439 aa3.31□□□□□ -1.88
C11orf88-204ENST00000529661 HMGB2P26583 209 aaKnown RBP3.31□□□□□ -1.88
C11orf88-204ENST00000529661 BMI1P35226 326 aa3.31□□□□□ -1.88
C11orf88-204ENST00000529661 BTDP43251 543 aa3.31□□□□□ -1.88
C11orf88-204ENST00000529661 CDKN1BP46527 198 aa3.31□□□□□ -1.88
C11orf88-204ENST00000529661 QARSP47897 775 aaKnown RBP3.31□□□□□ -1.88
C11orf88-204ENST00000529661 ATP1B3P54709 279 aa3.31□□□□□ -1.88
C11orf88-204ENST00000529661 HADHBP55084 474 aaKnown RBP3.31□□□□□ -1.88
C11orf88-204ENST00000529661 OGDHQ02218 1023 aa3.31□□□□□ -1.88
C11orf88-204ENST00000529661 EGFEM1PQ0D2K5 195 aa3.31□□□□□ -1.88
C11orf88-204ENST00000529661 VGLL4Q14135 290 aa3.31□□□□□ -1.88
C11orf88-204ENST00000529661 ARL6IP1Q15041 203 aa3.31□□□□□ -1.88
C11orf88-204ENST00000529661 PRR30Q53SZ7 412 aaPredicted RBP3.31□□□□□ -1.88
C11orf88-204ENST00000529661 DMRTC1Q5HYR2 192 aa3.31□□□□□ -1.88
C11orf88-204ENST00000529661 C6orf226Q5I0X4 101 aa3.31□□□□□ -1.88
C11orf88-204ENST00000529661 KLF17Q5JT82 389 aaPredicted RBP3.31□□□□□ -1.88
C11orf88-204ENST00000529661 CTSL3PQ5NE16 218 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 146.4 ms