RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 AGR2O95994 175 aa7.79□□□□□ -1.16
VPS11-203ENST00000529545 ADRA2AP08913 450 aa7.79□□□□□ -1.16
VPS11-203ENST00000529545 CECR9P0C854 216 aa7.79□□□□□ -1.16
VPS11-203ENST00000529545 UQCRBP14927 111 aa7.79□□□□□ -1.16
VPS11-203ENST00000529545 CPA3P15088 417 aa7.79□□□□□ -1.16
VPS11-203ENST00000529545 THBS4P35443 961 aa7.79□□□□□ -1.16
VPS11-203ENST00000529545 PGM1P36871 562 aa7.79□□□□□ -1.16
VPS11-203ENST00000529545 CCT5P48643 541 aa7.79□□□□□ -1.16
VPS11-203ENST00000529545 IDH2P48735 452 aaKnown RBP7.79□□□□□ -1.16
VPS11-203ENST00000529545 POLR2HP52434 150 aaKnown RBP7.79□□□□□ -1.16
VPS11-203ENST00000529545 MAP2K6P52564 334 aa7.79□□□□□ -1.16
VPS11-203ENST00000529545 HILS1P60008 231 aa7.79□□□□□ -1.16
VPS11-203ENST00000529545 RPS26P62854 115 aaKnown RBP7.79□□□□□ -1.16
VPS11-203ENST00000529545 RIN1Q13671 783 aa7.79□□□□□ -1.16
VPS11-203ENST00000529545 TRIP10Q15642 601 aa7.79□□□□□ -1.16
VPS11-203ENST00000529545 ARHGAP11BQ3KRB8 267 aa7.79□□□□□ -1.16
VPS11-203ENST00000529545 CCDC153Q494R4 210 aa7.79□□□□□ -1.16
VPS11-203ENST00000529545 OTUD3Q5T2D3 398 aaPredicted RBP7.79□□□□□ -1.16
VPS11-203ENST00000529545 TMEM225Q6GV28 225 aa7.79□□□□□ -1.16
VPS11-203ENST00000529545 C6orf120Q7Z4R8 191 aa7.79□□□□□ -1.16
VPS11-203ENST00000529545 ZCCHC24Q8N2G6 241 aaKnown RBP7.79□□□□□ -1.16
VPS11-203ENST00000529545 ARFGAP2Q8N6H7 521 aa7.79□□□□□ -1.16
VPS11-203ENST00000529545 OR1K1Q8NGR3 316 aa7.79□□□□□ -1.16
VPS11-203ENST00000529545 OR5AK3PQ8NH89 298 aa7.79□□□□□ -1.16
VPS11-203ENST00000529545 PPP3R2Q96LZ3 170 aa7.79□□□□□ -1.16
VPS11-203ENST00000529545 DOK1Q99704 481 aa7.79□□□□□ -1.16
VPS11-203ENST00000529545 SF3B5Q9BWJ5 86 aaKnown RBP7.79□□□□□ -1.16
VPS11-203ENST00000529545 PIF1Q9H611 641 aa7.79□□□□□ -1.16
VPS11-203ENST00000529545 TNFRSF12AQ9NP84 129 aa7.79□□□□□ -1.16
VPS11-203ENST00000529545 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.79□□□□□ -1.16
VPS11-203ENST00000529545 KCNE5Q9UJ90 142 aa7.79□□□□□ -1.16
VPS11-203ENST00000529545 USP22Q9UPT9 525 aa7.79□□□□□ -1.16
VPS11-203ENST00000529545 TMED7Q9Y3B3 224 aa7.79□□□□□ -1.16
VPS11-203ENST00000529545 WDR45Q9Y484 360 aa7.79□□□□□ -1.16
VPS11-203ENST00000529545 SPEF1Q9Y4P9 236 aa7.79□□□□□ -1.16
VPS11-203ENST00000529545 NUP214P35658 2090 aaPredicted RBP7.79□□□□□ -1.16
VPS11-203ENST00000529545 ARPC4-TTLL3A0A0A6YYG9 625 aa7.78□□□□□ -1.16
VPS11-203ENST00000529545 OR6C65A6NJZ3 312 aa7.78□□□□□ -1.16
VPS11-203ENST00000529545 LGI1O95970 557 aa7.78□□□□□ -1.16
VPS11-203ENST00000529545 TFP02787 698 aa7.78□□□□□ -1.16
VPS11-203ENST00000529545 PROCP04070 461 aa7.78□□□□□ -1.16
VPS11-203ENST00000529545 GPIP06744 558 aa7.78□□□□□ -1.16
VPS11-203ENST00000529545 MSMBP08118 114 aa7.78□□□□□ -1.16
VPS11-203ENST00000529545 ABHD2P08910 425 aa7.78□□□□□ -1.16
VPS11-203ENST00000529545 IMPDH2P12268 514 aa7.78□□□□□ -1.16
VPS11-203ENST00000529545 PRPS1L1P21108 318 aa7.78□□□□□ -1.16
VPS11-203ENST00000529545 GCAP28676 217 aa7.78□□□□□ -1.16
VPS11-203ENST00000529545 GPR6P46095 362 aaPredicted RBP7.78□□□□□ -1.16
VPS11-203ENST00000529545 SH3BGRP55822 239 aaPredicted RBP7.78□□□□□ -1.16
VPS11-203ENST00000529545 KCNJ10P78508 379 aa7.78□□□□□ -1.16
VPS11-203ENST00000529545 HPCAP84074 193 aa7.78□□□□□ -1.16
VPS11-203ENST00000529545 PDLIM3Q53GG5 364 aaPredicted RBP7.78□□□□□ -1.16
VPS11-203ENST00000529545 PRR31Q5SQ13 230 aa7.78□□□□□ -1.16
VPS11-203ENST00000529545 KANK2Q63ZY3 851 aa7.78□□□□□ -1.16
VPS11-203ENST00000529545 REP15Q6BDI9 236 aa7.78□□□□□ -1.16
VPS11-203ENST00000529545 FAHD2BQ6P2I3 314 aaPredicted RBP7.78□□□□□ -1.16
VPS11-203ENST00000529545 EMBQ6PCB8 327 aa7.78□□□□□ -1.16
VPS11-203ENST00000529545 GPAT4Q86UL3 456 aa7.78□□□□□ -1.16
VPS11-203ENST00000529545 FAM169BQ8N8A8 192 aa7.78□□□□□ -1.16
VPS11-203ENST00000529545 FAM71CQ8NEG0 241 aa7.78□□□□□ -1.16
VPS11-203ENST00000529545 IL17RDQ8NFM7 739 aa7.78□□□□□ -1.16
VPS11-203ENST00000529545 OR9K2Q8NGE7 335 aa7.78□□□□□ -1.16
VPS11-203ENST00000529545 OR51F2Q8NH61 342 aa7.78□□□□□ -1.16
VPS11-203ENST00000529545 MAGEE2Q8TD90 523 aaPredicted RBP7.78□□□□□ -1.16
VPS11-203ENST00000529545 CKAP2Q8WWK9 683 aa7.78□□□□□ -1.16
VPS11-203ENST00000529545 XAGE5Q8WWM1 108 aa7.78□□□□□ -1.16
VPS11-203ENST00000529545 BCL2L2Q92843 193 aaPredicted RBP7.78□□□□□ -1.16
VPS11-203ENST00000529545 COQ8BQ96D53 544 aa7.78□□□□□ -1.16
VPS11-203ENST00000529545 FAHD2AQ96GK7 314 aa7.78□□□□□ -1.16
VPS11-203ENST00000529545 SLC35G5Q96KT7 338 aa7.78□□□□□ -1.16
VPS11-203ENST00000529545 LRRC37BQ96QE4 947 aa7.78□□□□□ -1.16
VPS11-203ENST00000529545 DUSP26Q9BV47 211 aa7.78□□□□□ -1.16
VPS11-203ENST00000529545 TAPBPLQ9BX59 468 aa7.78□□□□□ -1.16
VPS11-203ENST00000529545 SUCNR1Q9BXA5 334 aa7.78□□□□□ -1.16
VPS11-203ENST00000529545 ZNF350Q9GZX5 532 aa7.78□□□□□ -1.16
VPS11-203ENST00000529545 MS4A5Q9H3V2 200 aa7.78□□□□□ -1.16
VPS11-203ENST00000529545 LPAR2Q9HBW0 351 aa7.78□□□□□ -1.16
VPS11-203ENST00000529545 EXOSC3Q9NQT5 275 aaKnown RBP7.78□□□□□ -1.16
VPS11-203ENST00000529545 POLE3Q9NRF9 147 aa7.78□□□□□ -1.16
VPS11-203ENST00000529545 OXSMQ9NWU1 459 aa7.78□□□□□ -1.16
VPS11-203ENST00000529545 NOP53Q9NZM5 478 aaKnown RBP7.78□□□□□ -1.16
VPS11-203ENST00000529545 PSMC3IPQ9P2W1 217 aaPredicted RBP7.78□□□□□ -1.16
VPS11-203ENST00000529545 CRNNQ9UBG3 495 aaPredicted RBP7.78□□□□□ -1.16
VPS11-203ENST00000529545 TBK1Q9UHD2 729 aa7.78□□□□□ -1.16
VPS11-203ENST00000529545 MID2Q9UJV3 735 aa7.78□□□□□ -1.16
VPS11-203ENST00000529545 EMCNQ9ULC0 261 aa7.78□□□□□ -1.16
VPS11-203ENST00000529545 DNAJC15Q9Y5T4 150 aa7.78□□□□□ -1.16
VPS11-203ENST00000529545 SVEP1Q4LDE5 3571 aa7.77□□□□□ -1.17
VPS11-203ENST00000529545 A0A096LPE4 126 aa7.77□□□□□ -1.17
VPS11-203ENST00000529545 TRAV20A0A0B4J274 112 aa7.77□□□□□ -1.17
VPS11-203ENST00000529545 CENPVL1A0A0U1RR11 272 aa7.77□□□□□ -1.17
VPS11-203ENST00000529545 RNF103-CHMP3A0A140T963 221 aa7.77□□□□□ -1.17
VPS11-203ENST00000529545 A0A1W2PPZ6 126 aa7.77□□□□□ -1.17
VPS11-203ENST00000529545 TMEM72A0PK05 275 aa7.77□□□□□ -1.17
VPS11-203ENST00000529545 LYNX1G3V0Z9 82 aa7.77□□□□□ -1.17
VPS11-203ENST00000529545 NR5A2O00482 541 aa7.77□□□□□ -1.17
VPS11-203ENST00000529545 PLIN3O60664 434 aa7.77□□□□□ -1.17
VPS11-203ENST00000529545 SCN2BO60939 215 aa7.77□□□□□ -1.17
VPS11-203ENST00000529545 PEX11AO75192 247 aa7.77□□□□□ -1.17
VPS11-203ENST00000529545 AKR7A3O95154 331 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms