RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 LIMS1P48059 325 aa16.33■□□□□ 0.2
SSRP1-204ENST00000529002 SEC24CP53992 1094 aa16.33■□□□□ 0.2
SSRP1-204ENST00000529002 LMO4P61968 165 aa16.33■□□□□ 0.2
SSRP1-204ENST00000529002 SCGB2A2Q13296 93 aa16.33■□□□□ 0.2
SSRP1-204ENST00000529002 SNTB2Q13425 540 aaKnown RBP16.33■□□□□ 0.2
SSRP1-204ENST00000529002 CEACAM7Q14002 265 aa16.33■□□□□ 0.2
SSRP1-204ENST00000529002 TYW3Q6IPR3 259 aaKnown RBP16.33■□□□□ 0.2
SSRP1-204ENST00000529002 PAQR6Q6TCH4 344 aa16.33■□□□□ 0.2
SSRP1-204ENST00000529002 SHISA2Q6UWI4 295 aa16.33■□□□□ 0.2
SSRP1-204ENST00000529002 C6orf120Q7Z4R8 191 aa16.33■□□□□ 0.2
SSRP1-204ENST00000529002 LCA5Q86VQ0 697 aa16.33■□□□□ 0.2
SSRP1-204ENST00000529002 OR51F2Q8NH61 342 aa16.33■□□□□ 0.2
SSRP1-204ENST00000529002 IFT81Q8WYA0 676 aa16.33■□□□□ 0.2
SSRP1-204ENST00000529002 CNOT9Q92600 299 aaKnown RBP16.33■□□□□ 0.2
SSRP1-204ENST00000529002 RAB8BQ92930 207 aa16.33■□□□□ 0.2
SSRP1-204ENST00000529002 C1orf50Q9BV19 199 aa16.33■□□□□ 0.2
SSRP1-204ENST00000529002 PPIAL4AQ9Y536 164 aa16.33■□□□□ 0.2
SSRP1-204ENST00000529002 DNAJC15Q9Y5T4 150 aa16.33■□□□□ 0.2
SSRP1-204ENST00000529002 CMYA5Q8N3K9 4069 aa16.32■□□□□ 0.2
SSRP1-204ENST00000529002 A0A1W2PPM1 405 aa16.32■□□□□ 0.2
SSRP1-204ENST00000529002 PNPP00491 289 aa16.32■□□□□ 0.2
SSRP1-204ENST00000529002 IGKV3-15P01624 115 aa16.32■□□□□ 0.2
SSRP1-204ENST00000529002 TACR3P29371 465 aa16.32■□□□□ 0.2
SSRP1-204ENST00000529002 ECHS1P30084 290 aa16.32■□□□□ 0.2
SSRP1-204ENST00000529002 UBA52P62987 128 aaKnown RBP16.32■□□□□ 0.2
SSRP1-204ENST00000529002 FUT5Q11128 374 aa16.32■□□□□ 0.2
SSRP1-204ENST00000529002 NPRL3Q12980 569 aa16.32■□□□□ 0.2
SSRP1-204ENST00000529002 OR7A5Q15622 319 aa16.32■□□□□ 0.2
SSRP1-204ENST00000529002 LSM12Q3MHD2 195 aaKnown RBP16.32■□□□□ 0.2
SSRP1-204ENST00000529002 C16orf62Q7Z3J2 963 aa16.32■□□□□ 0.2
SSRP1-204ENST00000529002 CLECL1Q8IZS7 167 aa16.32■□□□□ 0.2
SSRP1-204ENST00000529002 MRPL24Q96A35 216 aaKnown RBP16.32■□□□□ 0.2
SSRP1-204ENST00000529002 DDIT4LQ96D03 193 aa16.32■□□□□ 0.2
SSRP1-204ENST00000529002 CCDC126Q96EE4 140 aa16.32■□□□□ 0.2
SSRP1-204ENST00000529002 ANKRD27Q96NW4 1050 aa16.32■□□□□ 0.2
SSRP1-204ENST00000529002 JMJD8Q96S16 334 aa16.32■□□□□ 0.2
SSRP1-204ENST00000529002 MRPL37Q9BZE1 423 aaKnown RBP16.32■□□□□ 0.2
SSRP1-204ENST00000529002 OR51I1Q9H343 314 aa16.32■□□□□ 0.2
SSRP1-204ENST00000529002 G6PC2Q9NQR9 355 aa16.32■□□□□ 0.2
SSRP1-204ENST00000529002 ZNF275Q9NSD4 429 aaPredicted RBP16.32■□□□□ 0.2
SSRP1-204ENST00000529002 FBXO9Q9UK97 447 aaPredicted RBP16.32■□□□□ 0.2
SSRP1-204ENST00000529002 PCDHGB4Q9UN71 923 aa16.32■□□□□ 0.2
SSRP1-204ENST00000529002 H3BQF6 201 aa16.31■□□□□ 0.2
SSRP1-204ENST00000529002 OR12D1P0DN82 309 aa16.31■□□□□ 0.2
SSRP1-204ENST00000529002 NEFHP12036 1026 aa16.31■□□□□ 0.2
SSRP1-204ENST00000529002 ALDH3B1P43353 468 aa16.31■□□□□ 0.2
SSRP1-204ENST00000529002 DNAJB13P59910 316 aa16.31■□□□□ 0.2
SSRP1-204ENST00000529002 NIPAL3Q6P499 406 aa16.31■□□□□ 0.2
SSRP1-204ENST00000529002 ABHD12BQ7Z5M8 362 aaPredicted RBP16.31■□□□□ 0.2
SSRP1-204ENST00000529002 DDIASQ8IXT1 998 aa16.31■□□□□ 0.2
SSRP1-204ENST00000529002 ARFGAP2Q8N6H7 521 aa16.31■□□□□ 0.2
SSRP1-204ENST00000529002 MZB1Q8WU39 189 aa16.31■□□□□ 0.2
SSRP1-204ENST00000529002 TAF15Q92804 592 aaKnown RBP eCLIP16.31■□□□□ 0.2
SSRP1-204ENST00000529002 SLC35G5Q96KT7 338 aa16.31■□□□□ 0.2
SSRP1-204ENST00000529002 DUX5Q96PT3 197 aa16.31■□□□□ 0.2
SSRP1-204ENST00000529002 FMO2Q99518 471 aa16.31■□□□□ 0.2
SSRP1-204ENST00000529002 SUCNR1Q9BXA5 334 aa16.31■□□□□ 0.2
SSRP1-204ENST00000529002 TMPRSS13Q9BYE2 586 aa16.31■□□□□ 0.2
SSRP1-204ENST00000529002 REV1Q9UBZ9 1251 aa16.31■□□□□ 0.2
SSRP1-204ENST00000529002 TBK1Q9UHD2 729 aa16.31■□□□□ 0.2
SSRP1-204ENST00000529002 SLC35A3Q9Y2D2 325 aa16.31■□□□□ 0.2
SSRP1-204ENST00000529002 TMED5Q9Y3A6 229 aa16.31■□□□□ 0.2
SSRP1-204ENST00000529002 WNK1Q9H4A3 2382 aa16.31■□□□□ 0.2
SSRP1-204ENST00000529002 LIPT2A6NK58 231 aa16.3■□□□□ 0.2
SSRP1-204ENST00000529002 VSTM5A8MXK1 200 aa16.3■□□□□ 0.2
SSRP1-204ENST00000529002 PPIHO43447 177 aaKnown RBP16.3■□□□□ 0.2
SSRP1-204ENST00000529002 PEX11AO75192 247 aa16.3■□□□□ 0.2
SSRP1-204ENST00000529002 NCR1O76036 304 aa16.3■□□□□ 0.2
SSRP1-204ENST00000529002 TFP02787 698 aa16.3■□□□□ 0.2
SSRP1-204ENST00000529002 CBR1P16152 277 aa16.3■□□□□ 0.2
SSRP1-204ENST00000529002 POLR2HP52434 150 aaKnown RBP16.3■□□□□ 0.2
SSRP1-204ENST00000529002 KCNJ10P78508 379 aa16.3■□□□□ 0.2
SSRP1-204ENST00000529002 ARF1P84077 181 aaKnown RBP16.3■□□□□ 0.2
SSRP1-204ENST00000529002 DAG1Q14118 895 aa16.3■□□□□ 0.2
SSRP1-204ENST00000529002 MAD2L1BPQ15013 274 aaPredicted RBP16.3■□□□□ 0.2
SSRP1-204ENST00000529002 C3orf36Q3SXR2 165 aa16.3■□□□□ 0.2
SSRP1-204ENST00000529002 KANK2Q63ZY3 851 aa16.3■□□□□ 0.2
SSRP1-204ENST00000529002 FRRS1Q6ZNA5 592 aa16.3■□□□□ 0.2
SSRP1-204ENST00000529002 ZNF572Q7Z3I7 529 aaPredicted RBP16.3■□□□□ 0.2
SSRP1-204ENST00000529002 LRP11Q86VZ4 500 aa16.3■□□□□ 0.2
SSRP1-204ENST00000529002 XAGE5Q8WWM1 108 aa16.3■□□□□ 0.2
SSRP1-204ENST00000529002 MOAP1Q96BY2 351 aa16.3■□□□□ 0.2
SSRP1-204ENST00000529002 COQ8BQ96D53 544 aa16.3■□□□□ 0.2
SSRP1-204ENST00000529002 SYT3Q9BQG1 590 aa16.3■□□□□ 0.2
SSRP1-204ENST00000529002 NOX3Q9HBY0 568 aa16.3■□□□□ 0.2
SSRP1-204ENST00000529002 CRLF2Q9HC73 371 aa16.3■□□□□ 0.2
SSRP1-204ENST00000529002 OXSMQ9NWU1 459 aa16.3■□□□□ 0.2
SSRP1-204ENST00000529002 MYEF2Q9P2K5 600 aaKnown RBP16.3■□□□□ 0.2
SSRP1-204ENST00000529002 DCDC2Q9UHG0 476 aa16.3■□□□□ 0.2
SSRP1-204ENST00000529002 WDR45Q9Y484 360 aa16.3■□□□□ 0.2
SSRP1-204ENST00000529002 TRAV20A0A0B4J274 112 aa16.29■□□□□ 0.2
SSRP1-204ENST00000529002 PRAMEF27A3QJZ7 478 aa16.29■□□□□ 0.2
SSRP1-204ENST00000529002 AQP7P3A6NL99 342 aa16.29■□□□□ 0.2
SSRP1-204ENST00000529002 TMEM229AB2RXF0 380 aa16.29■□□□□ 0.2
SSRP1-204ENST00000529002 PIP5K1BO14986 540 aa16.29■□□□□ 0.2
SSRP1-204ENST00000529002 ZNF208O43345 1280 aa16.29■□□□□ 0.2
SSRP1-204ENST00000529002 SCN2BO60939 215 aa16.29■□□□□ 0.2
SSRP1-204ENST00000529002 SEC14L2O76054 403 aa16.29■□□□□ 0.2
SSRP1-204ENST00000529002 AK1P00568 194 aa16.29■□□□□ 0.2
SSRP1-204ENST00000529002 C1QCP02747 245 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms