RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 GOSR1O95249 250 aa11.88□□□□□ -0.51
CAPN1-215ENST00000528396 ADAP00813 363 aa11.88□□□□□ -0.51
CAPN1-215ENST00000528396 CD247P20963 164 aa11.88□□□□□ -0.51
CAPN1-215ENST00000528396 PRDX6P30041 224 aa11.88□□□□□ -0.51
CAPN1-215ENST00000528396 RPS5P46782 204 aaKnown RBP11.88□□□□□ -0.51
CAPN1-215ENST00000528396 OR3A2P47893 321 aa11.88□□□□□ -0.51
CAPN1-215ENST00000528396 GZMMP51124 257 aa11.88□□□□□ -0.51
CAPN1-215ENST00000528396 SLC7A2P52569 658 aa11.88□□□□□ -0.51
CAPN1-215ENST00000528396 SLC16A1P53985 500 aa11.88□□□□□ -0.51
CAPN1-215ENST00000528396 KRTAP10-9P60411 292 aa11.88□□□□□ -0.51
CAPN1-215ENST00000528396 LIPEQ05469 1076 aa11.88□□□□□ -0.51
CAPN1-215ENST00000528396 NRF1Q16656 503 aa11.88□□□□□ -0.51
CAPN1-215ENST00000528396 SWT1Q5T5J6 900 aaKnown RBP11.88□□□□□ -0.51
CAPN1-215ENST00000528396 C6orf89Q6UWU4 347 aa11.88□□□□□ -0.51
CAPN1-215ENST00000528396 CASP12Q6UXS9 341 aa11.88□□□□□ -0.51
CAPN1-215ENST00000528396 CCDC80Q76M96 950 aa11.88□□□□□ -0.51
CAPN1-215ENST00000528396 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.88□□□□□ -0.51
CAPN1-215ENST00000528396 CDH24Q86UP0 819 aa11.88□□□□□ -0.51
CAPN1-215ENST00000528396 CXorf67Q86X51 503 aaPredicted RBP11.88□□□□□ -0.51
CAPN1-215ENST00000528396 MICU2Q8IYU8 434 aa11.88□□□□□ -0.51
CAPN1-215ENST00000528396 TMEM99Q8N816 258 aa11.88□□□□□ -0.51
CAPN1-215ENST00000528396 MFSD8Q8NHS3 518 aa11.88□□□□□ -0.51
CAPN1-215ENST00000528396 LZICQ8WZA0 190 aa11.88□□□□□ -0.51
CAPN1-215ENST00000528396 KISS1RQ969F8 398 aaPredicted RBP11.88□□□□□ -0.51
CAPN1-215ENST00000528396 MYLK2Q9H1R3 596 aa11.88□□□□□ -0.51
CAPN1-215ENST00000528396 RASSF1Q9NS23 344 aa11.88□□□□□ -0.51
CAPN1-215ENST00000528396 GPR52Q9Y2T5 361 aa11.88□□□□□ -0.51
CAPN1-215ENST00000528396 SH3GLB1Q9Y371 365 aa11.88□□□□□ -0.51
CAPN1-215ENST00000528396 ABCA4P78363 2273 aa11.88□□□□□ -0.51
CAPN1-215ENST00000528396 TRAV36DV7A0A075B6V5 113 aa11.87□□□□□ -0.51
CAPN1-215ENST00000528396 A0A0B4J2E0 115 aa11.87□□□□□ -0.51
CAPN1-215ENST00000528396 A0A1B0GX12 115 aa11.87□□□□□ -0.51
CAPN1-215ENST00000528396 AQP7P3A6NL99 342 aa11.87□□□□□ -0.51
CAPN1-215ENST00000528396 ZNF716A6NP11 495 aa11.87□□□□□ -0.51
CAPN1-215ENST00000528396 GMNNO75496 209 aa11.87□□□□□ -0.51
CAPN1-215ENST00000528396 GCM2O75603 506 aaPredicted RBP11.87□□□□□ -0.51
CAPN1-215ENST00000528396 H3F3AP84243 136 aa11.87□□□□□ -0.51
CAPN1-215ENST00000528396 C1DQ13901 141 aaKnown RBP11.87□□□□□ -0.51
CAPN1-215ENST00000528396 POU4F3Q15319 338 aa11.87□□□□□ -0.51
CAPN1-215ENST00000528396 CYBRD1Q53TN4 286 aa11.87□□□□□ -0.51
CAPN1-215ENST00000528396 GKAP1Q5VSY0 366 aaPredicted RBP11.87□□□□□ -0.51
CAPN1-215ENST00000528396 ZNF613Q6PF04 617 aa11.87□□□□□ -0.51
CAPN1-215ENST00000528396 HACD2Q6Y1H2 254 aa11.87□□□□□ -0.51
CAPN1-215ENST00000528396 STAC2Q6ZMT1 411 aa11.87□□□□□ -0.51
CAPN1-215ENST00000528396 Q6ZT83 130 aa11.87□□□□□ -0.51
CAPN1-215ENST00000528396 P3H2Q8IVL5 708 aa11.87□□□□□ -0.51
CAPN1-215ENST00000528396 GPR32P1Q8NGA4 272 aa11.87□□□□□ -0.51
CAPN1-215ENST00000528396 OR6T1Q8NGN1 323 aa11.87□□□□□ -0.51
CAPN1-215ENST00000528396 KTI12Q96EK9 354 aaPredicted RBP11.87□□□□□ -0.51
CAPN1-215ENST00000528396 TPD52L3Q96J77 140 aa11.87□□□□□ -0.51
CAPN1-215ENST00000528396 KCTD14Q9BQ13 255 aaPredicted RBP11.87□□□□□ -0.51
CAPN1-215ENST00000528396 SF3B5Q9BWJ5 86 aaKnown RBP11.87□□□□□ -0.51
CAPN1-215ENST00000528396 CMTM6Q9NX76 183 aa11.87□□□□□ -0.51
CAPN1-215ENST00000528396 UPB1Q9UBR1 384 aa11.87□□□□□ -0.51
CAPN1-215ENST00000528396 ING1Q9UK53 422 aaPredicted RBP11.87□□□□□ -0.51
CAPN1-215ENST00000528396 USP22Q9UPT9 525 aa11.87□□□□□ -0.51
CAPN1-215ENST00000528396 RASD1Q9Y272 281 aa11.87□□□□□ -0.51
CAPN1-215ENST00000528396 AKAP6Q13023 2319 aa11.87□□□□□ -0.51
CAPN1-215ENST00000528396 TRAPPC13A5PLN9 417 aa11.86□□□□□ -0.51
CAPN1-215ENST00000528396 ZNF814B7Z6K7 855 aa11.86□□□□□ -0.51
CAPN1-215ENST00000528396 RAMP1O60894 148 aa11.86□□□□□ -0.51
CAPN1-215ENST00000528396 NPIPB7O75200 414 aa11.86□□□□□ -0.51
CAPN1-215ENST00000528396 KRT33AO76009 404 aa11.86□□□□□ -0.51
CAPN1-215ENST00000528396 CNOT4O95628 575 aaKnown RBP11.86□□□□□ -0.51
CAPN1-215ENST00000528396 IGHV3-9P01782 118 aa11.86□□□□□ -0.51
CAPN1-215ENST00000528396 NQO1P15559 274 aaKnown RBP11.86□□□□□ -0.51
CAPN1-215ENST00000528396 PSMB1P20618 241 aaKnown RBP11.86□□□□□ -0.51
CAPN1-215ENST00000528396 CCKARP32238 428 aa11.86□□□□□ -0.51
CAPN1-215ENST00000528396 IFNA8P32881 189 aa11.86□□□□□ -0.51
CAPN1-215ENST00000528396 KDELR2P33947 212 aa11.86□□□□□ -0.51
CAPN1-215ENST00000528396 CDH12P55289 794 aa11.86□□□□□ -0.51
CAPN1-215ENST00000528396 PSME3P61289 254 aa11.86□□□□□ -0.51
CAPN1-215ENST00000528396 MXRA7P84157 204 aa11.86□□□□□ -0.51
CAPN1-215ENST00000528396 ITGADQ13349 1161 aa11.86□□□□□ -0.51
CAPN1-215ENST00000528396 SLC17A1Q14916 467 aa11.86□□□□□ -0.51
CAPN1-215ENST00000528396 MFSD13AQ14CX5 517 aa11.86□□□□□ -0.51
CAPN1-215ENST00000528396 ENTPD8Q5MY95 495 aa11.86□□□□□ -0.51
CAPN1-215ENST00000528396 FAM69AQ5T7M9 428 aa11.86□□□□□ -0.51
CAPN1-215ENST00000528396 FBXW9Q5XUX1 488 aa11.86□□□□□ -0.51
CAPN1-215ENST00000528396 DEF8Q6ZN54 512 aa11.86□□□□□ -0.51
CAPN1-215ENST00000528396 BHLHA15Q7RTS1 189 aaPredicted RBP11.86□□□□□ -0.51
CAPN1-215ENST00000528396 PIGWQ7Z7B1 504 aa11.86□□□□□ -0.51
CAPN1-215ENST00000528396 LSRQ86X29 649 aaPredicted RBP11.86□□□□□ -0.51
CAPN1-215ENST00000528396 CARM1Q86X55 608 aa11.86□□□□□ -0.51
CAPN1-215ENST00000528396 WFDC8Q8IUA0 241 aa11.86□□□□□ -0.51
CAPN1-215ENST00000528396 SLC15A3Q8IY34 581 aa11.86□□□□□ -0.51
CAPN1-215ENST00000528396 GABRG1Q8N1C3 465 aa11.86□□□□□ -0.51
CAPN1-215ENST00000528396 OR9K2Q8NGE7 335 aa11.86□□□□□ -0.51
CAPN1-215ENST00000528396 S100PBPQ96BU1 408 aa11.86□□□□□ -0.51
CAPN1-215ENST00000528396 PIK3IP1Q96FE7 263 aa11.86□□□□□ -0.51
CAPN1-215ENST00000528396 CCT8L2Q96SF2 557 aa11.86□□□□□ -0.51
CAPN1-215ENST00000528396 USB1Q9BQ65 265 aaKnown RBP11.86□□□□□ -0.51
CAPN1-215ENST00000528396 ASPNQ9BXN1 380 aa11.86□□□□□ -0.51
CAPN1-215ENST00000528396 RSPO3Q9BXY4 272 aaPredicted RBP11.86□□□□□ -0.51
CAPN1-215ENST00000528396 ALG2Q9H553 416 aa11.86□□□□□ -0.51
CAPN1-215ENST00000528396 SPAG4Q9NPE6 437 aa11.86□□□□□ -0.51
CAPN1-215ENST00000528396 NGBQ9NPG2 151 aa11.86□□□□□ -0.51
CAPN1-215ENST00000528396 ASB6Q9NWX5 421 aa11.86□□□□□ -0.51
CAPN1-215ENST00000528396 ADA2Q9NZK5 511 aa11.86□□□□□ -0.51
CAPN1-215ENST00000528396 PRSS50Q9UI38 385 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms