RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 CD247P20963 164 aa11.88□□□□□ -0.51
CAPN1-209ENST00000527469 PRDX6P30041 224 aa11.88□□□□□ -0.51
CAPN1-209ENST00000527469 RPS5P46782 204 aaKnown RBP11.88□□□□□ -0.51
CAPN1-209ENST00000527469 OR3A2P47893 321 aa11.88□□□□□ -0.51
CAPN1-209ENST00000527469 GZMMP51124 257 aa11.88□□□□□ -0.51
CAPN1-209ENST00000527469 SLC7A2P52569 658 aa11.88□□□□□ -0.51
CAPN1-209ENST00000527469 SLC16A1P53985 500 aa11.88□□□□□ -0.51
CAPN1-209ENST00000527469 KRTAP10-9P60411 292 aa11.88□□□□□ -0.51
CAPN1-209ENST00000527469 LIPEQ05469 1076 aa11.88□□□□□ -0.51
CAPN1-209ENST00000527469 NRF1Q16656 503 aa11.88□□□□□ -0.51
CAPN1-209ENST00000527469 SWT1Q5T5J6 900 aaKnown RBP11.88□□□□□ -0.51
CAPN1-209ENST00000527469 C6orf89Q6UWU4 347 aa11.88□□□□□ -0.51
CAPN1-209ENST00000527469 CASP12Q6UXS9 341 aa11.88□□□□□ -0.51
CAPN1-209ENST00000527469 CCDC80Q76M96 950 aa11.88□□□□□ -0.51
CAPN1-209ENST00000527469 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.88□□□□□ -0.51
CAPN1-209ENST00000527469 CDH24Q86UP0 819 aa11.88□□□□□ -0.51
CAPN1-209ENST00000527469 CXorf67Q86X51 503 aaPredicted RBP11.88□□□□□ -0.51
CAPN1-209ENST00000527469 MICU2Q8IYU8 434 aa11.88□□□□□ -0.51
CAPN1-209ENST00000527469 TMEM99Q8N816 258 aa11.88□□□□□ -0.51
CAPN1-209ENST00000527469 MFSD8Q8NHS3 518 aa11.88□□□□□ -0.51
CAPN1-209ENST00000527469 LZICQ8WZA0 190 aa11.88□□□□□ -0.51
CAPN1-209ENST00000527469 KISS1RQ969F8 398 aaPredicted RBP11.88□□□□□ -0.51
CAPN1-209ENST00000527469 MYLK2Q9H1R3 596 aa11.88□□□□□ -0.51
CAPN1-209ENST00000527469 RASSF1Q9NS23 344 aa11.88□□□□□ -0.51
CAPN1-209ENST00000527469 GPR52Q9Y2T5 361 aa11.88□□□□□ -0.51
CAPN1-209ENST00000527469 SH3GLB1Q9Y371 365 aa11.88□□□□□ -0.51
CAPN1-209ENST00000527469 ABCA4P78363 2273 aa11.88□□□□□ -0.51
CAPN1-209ENST00000527469 TRAV36DV7A0A075B6V5 113 aa11.87□□□□□ -0.51
CAPN1-209ENST00000527469 A0A0B4J2E0 115 aa11.87□□□□□ -0.51
CAPN1-209ENST00000527469 A0A1B0GX12 115 aa11.87□□□□□ -0.51
CAPN1-209ENST00000527469 AQP7P3A6NL99 342 aa11.87□□□□□ -0.51
CAPN1-209ENST00000527469 ZNF716A6NP11 495 aa11.87□□□□□ -0.51
CAPN1-209ENST00000527469 GMNNO75496 209 aa11.87□□□□□ -0.51
CAPN1-209ENST00000527469 GCM2O75603 506 aaPredicted RBP11.87□□□□□ -0.51
CAPN1-209ENST00000527469 H3F3AP84243 136 aa11.87□□□□□ -0.51
CAPN1-209ENST00000527469 C1DQ13901 141 aaKnown RBP11.87□□□□□ -0.51
CAPN1-209ENST00000527469 POU4F3Q15319 338 aa11.87□□□□□ -0.51
CAPN1-209ENST00000527469 CYBRD1Q53TN4 286 aa11.87□□□□□ -0.51
CAPN1-209ENST00000527469 GKAP1Q5VSY0 366 aaPredicted RBP11.87□□□□□ -0.51
CAPN1-209ENST00000527469 ZNF613Q6PF04 617 aa11.87□□□□□ -0.51
CAPN1-209ENST00000527469 HACD2Q6Y1H2 254 aa11.87□□□□□ -0.51
CAPN1-209ENST00000527469 STAC2Q6ZMT1 411 aa11.87□□□□□ -0.51
CAPN1-209ENST00000527469 Q6ZT83 130 aa11.87□□□□□ -0.51
CAPN1-209ENST00000527469 P3H2Q8IVL5 708 aa11.87□□□□□ -0.51
CAPN1-209ENST00000527469 GPR32P1Q8NGA4 272 aa11.87□□□□□ -0.51
CAPN1-209ENST00000527469 OR6T1Q8NGN1 323 aa11.87□□□□□ -0.51
CAPN1-209ENST00000527469 KTI12Q96EK9 354 aaPredicted RBP11.87□□□□□ -0.51
CAPN1-209ENST00000527469 TPD52L3Q96J77 140 aa11.87□□□□□ -0.51
CAPN1-209ENST00000527469 KCTD14Q9BQ13 255 aaPredicted RBP11.87□□□□□ -0.51
CAPN1-209ENST00000527469 SF3B5Q9BWJ5 86 aaKnown RBP11.87□□□□□ -0.51
CAPN1-209ENST00000527469 CMTM6Q9NX76 183 aa11.87□□□□□ -0.51
CAPN1-209ENST00000527469 UPB1Q9UBR1 384 aa11.87□□□□□ -0.51
CAPN1-209ENST00000527469 ING1Q9UK53 422 aaPredicted RBP11.87□□□□□ -0.51
CAPN1-209ENST00000527469 USP22Q9UPT9 525 aa11.87□□□□□ -0.51
CAPN1-209ENST00000527469 RASD1Q9Y272 281 aa11.87□□□□□ -0.51
CAPN1-209ENST00000527469 AKAP6Q13023 2319 aa11.87□□□□□ -0.51
CAPN1-209ENST00000527469 TRAPPC13A5PLN9 417 aa11.86□□□□□ -0.51
CAPN1-209ENST00000527469 ZNF814B7Z6K7 855 aa11.86□□□□□ -0.51
CAPN1-209ENST00000527469 RAMP1O60894 148 aa11.86□□□□□ -0.51
CAPN1-209ENST00000527469 NPIPB7O75200 414 aa11.86□□□□□ -0.51
CAPN1-209ENST00000527469 KRT33AO76009 404 aa11.86□□□□□ -0.51
CAPN1-209ENST00000527469 CNOT4O95628 575 aaKnown RBP11.86□□□□□ -0.51
CAPN1-209ENST00000527469 IGHV3-9P01782 118 aa11.86□□□□□ -0.51
CAPN1-209ENST00000527469 NQO1P15559 274 aaKnown RBP11.86□□□□□ -0.51
CAPN1-209ENST00000527469 PSMB1P20618 241 aaKnown RBP11.86□□□□□ -0.51
CAPN1-209ENST00000527469 CCKARP32238 428 aa11.86□□□□□ -0.51
CAPN1-209ENST00000527469 IFNA8P32881 189 aa11.86□□□□□ -0.51
CAPN1-209ENST00000527469 KDELR2P33947 212 aa11.86□□□□□ -0.51
CAPN1-209ENST00000527469 CDH12P55289 794 aa11.86□□□□□ -0.51
CAPN1-209ENST00000527469 PSME3P61289 254 aa11.86□□□□□ -0.51
CAPN1-209ENST00000527469 MXRA7P84157 204 aa11.86□□□□□ -0.51
CAPN1-209ENST00000527469 ITGADQ13349 1161 aa11.86□□□□□ -0.51
CAPN1-209ENST00000527469 SLC17A1Q14916 467 aa11.86□□□□□ -0.51
CAPN1-209ENST00000527469 MFSD13AQ14CX5 517 aa11.86□□□□□ -0.51
CAPN1-209ENST00000527469 ENTPD8Q5MY95 495 aa11.86□□□□□ -0.51
CAPN1-209ENST00000527469 FAM69AQ5T7M9 428 aa11.86□□□□□ -0.51
CAPN1-209ENST00000527469 FBXW9Q5XUX1 488 aa11.86□□□□□ -0.51
CAPN1-209ENST00000527469 DEF8Q6ZN54 512 aa11.86□□□□□ -0.51
CAPN1-209ENST00000527469 BHLHA15Q7RTS1 189 aaPredicted RBP11.86□□□□□ -0.51
CAPN1-209ENST00000527469 PIGWQ7Z7B1 504 aa11.86□□□□□ -0.51
CAPN1-209ENST00000527469 LSRQ86X29 649 aaPredicted RBP11.86□□□□□ -0.51
CAPN1-209ENST00000527469 CARM1Q86X55 608 aa11.86□□□□□ -0.51
CAPN1-209ENST00000527469 WFDC8Q8IUA0 241 aa11.86□□□□□ -0.51
CAPN1-209ENST00000527469 SLC15A3Q8IY34 581 aa11.86□□□□□ -0.51
CAPN1-209ENST00000527469 GABRG1Q8N1C3 465 aa11.86□□□□□ -0.51
CAPN1-209ENST00000527469 OR9K2Q8NGE7 335 aa11.86□□□□□ -0.51
CAPN1-209ENST00000527469 S100PBPQ96BU1 408 aa11.86□□□□□ -0.51
CAPN1-209ENST00000527469 PIK3IP1Q96FE7 263 aa11.86□□□□□ -0.51
CAPN1-209ENST00000527469 CCT8L2Q96SF2 557 aa11.86□□□□□ -0.51
CAPN1-209ENST00000527469 USB1Q9BQ65 265 aaKnown RBP11.86□□□□□ -0.51
CAPN1-209ENST00000527469 ASPNQ9BXN1 380 aa11.86□□□□□ -0.51
CAPN1-209ENST00000527469 RSPO3Q9BXY4 272 aaPredicted RBP11.86□□□□□ -0.51
CAPN1-209ENST00000527469 ALG2Q9H553 416 aa11.86□□□□□ -0.51
CAPN1-209ENST00000527469 SPAG4Q9NPE6 437 aa11.86□□□□□ -0.51
CAPN1-209ENST00000527469 NGBQ9NPG2 151 aa11.86□□□□□ -0.51
CAPN1-209ENST00000527469 ASB6Q9NWX5 421 aa11.86□□□□□ -0.51
CAPN1-209ENST00000527469 ADA2Q9NZK5 511 aa11.86□□□□□ -0.51
CAPN1-209ENST00000527469 PRSS50Q9UI38 385 aa11.86□□□□□ -0.51
CAPN1-209ENST00000527469 FLVCR1Q9Y5Y0 555 aa11.86□□□□□ -0.51
CAPN1-209ENST00000527469 A0A087WUJ7 227 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms