RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 MFSD6LQ8IWD5 586 aa2.88□□□□□ -1.95
PCM1-219ENST00000523540 TEX9Q8N6V9 391 aa2.88□□□□□ -1.95
PCM1-219ENST00000523540 OR6C4Q8NGE1 309 aa2.88□□□□□ -1.95
PCM1-219ENST00000523540 ARPC1AQ92747 370 aa2.88□□□□□ -1.95
PCM1-219ENST00000523540 TTC25Q96NG3 672 aa2.88□□□□□ -1.95
PCM1-219ENST00000523540 OR2M2Q96R28 347 aa2.88□□□□□ -1.95
PCM1-219ENST00000523540 RAB34Q9BZG1 259 aa2.88□□□□□ -1.95
PCM1-219ENST00000523540 WSB1Q9Y6I7 421 aa2.88□□□□□ -1.95
PCM1-219ENST00000523540 NKX2-6A6NCS4 301 aa2.87□□□□□ -1.95
PCM1-219ENST00000523540 A6NDX4 124 aa2.87□□□□□ -1.95
PCM1-219ENST00000523540 NDC80O14777 642 aa2.87□□□□□ -1.95
PCM1-219ENST00000523540 UGT1A9O60656 530 aa2.87□□□□□ -1.95
PCM1-219ENST00000523540 TNFSF13O75888 250 aa2.87□□□□□ -1.95
PCM1-219ENST00000523540 MMP1P03956 469 aa2.87□□□□□ -1.95
PCM1-219ENST00000523540 CRISP2P16562 243 aa2.87□□□□□ -1.95
PCM1-219ENST00000523540 CCNCP24863 283 aa2.87□□□□□ -1.95
PCM1-219ENST00000523540 CASP4P49662 377 aa2.87□□□□□ -1.95
PCM1-219ENST00000523540 PKNOX1P55347 436 aa2.87□□□□□ -1.95
PCM1-219ENST00000523540 SH3BGRP55822 239 aaPredicted RBP2.87□□□□□ -1.95
PCM1-219ENST00000523540 GPNMBQ14956 572 aa2.87□□□□□ -1.95
PCM1-219ENST00000523540 SLC15A2Q16348 729 aa2.87□□□□□ -1.95
PCM1-219ENST00000523540 KHDRBS2Q5VWX1 349 aaKnown RBP2.87□□□□□ -1.95
PCM1-219ENST00000523540 ZNF571Q7Z3V5 609 aaPredicted RBP2.87□□□□□ -1.95
PCM1-219ENST00000523540 CCDC50Q8IVM0 306 aa2.87□□□□□ -1.95
PCM1-219ENST00000523540 Q8N9W7 124 aa2.87□□□□□ -1.95
PCM1-219ENST00000523540 MDS2Q8NDY4 140 aa2.87□□□□□ -1.95
PCM1-219ENST00000523540 RNF185Q96GF1 192 aa2.87□□□□□ -1.95
PCM1-219ENST00000523540 TIMD4Q96H15 378 aa2.87□□□□□ -1.95
PCM1-219ENST00000523540 MRPL45Q9BRJ2 306 aaKnown RBP2.87□□□□□ -1.95
PCM1-219ENST00000523540 ERP44Q9BS26 406 aa2.87□□□□□ -1.95
PCM1-219ENST00000523540 REEP4Q9H6H4 257 aa2.87□□□□□ -1.95
PCM1-219ENST00000523540 SMOXQ9NWM0 555 aa2.87□□□□□ -1.95
PCM1-219ENST00000523540 KLK12Q9UKR0 248 aa2.87□□□□□ -1.95
PCM1-219ENST00000523540 RAB26Q9ULW5 256 aa2.87□□□□□ -1.95
PCM1-219ENST00000523540 COPS3Q9UNS2 423 aa2.87□□□□□ -1.95
PCM1-219ENST00000523540 TRAF3IP3Q9Y228 551 aa2.87□□□□□ -1.95
PCM1-219ENST00000523540 RPL36Q9Y3U8 105 aaKnown RBP2.87□□□□□ -1.95
PCM1-219ENST00000523540 ATP10AO60312 1499 aa2.87□□□□□ -1.95
PCM1-219ENST00000523540 ARID1AO14497 2285 aa2.86□□□□□ -1.95
PCM1-219ENST00000523540 LOC110117498-PIK3R3F6TDL0 507 aa2.86□□□□□ -1.95
PCM1-219ENST00000523540 HIP1O00291 1037 aa2.86□□□□□ -1.95
PCM1-219ENST00000523540 AGPAT2O15120 278 aa2.86□□□□□ -1.95
PCM1-219ENST00000523540 RGS16O15492 202 aaPredicted RBP2.86□□□□□ -1.95
PCM1-219ENST00000523540 PRKAB2O43741 272 aa2.86□□□□□ -1.95
PCM1-219ENST00000523540 OPN1MWP04001 364 aa2.86□□□□□ -1.95
PCM1-219ENST00000523540 PCCAP05165 728 aaPredicted RBP2.86□□□□□ -1.95
PCM1-219ENST00000523540 OPN1MW2P0DN77 364 aa2.86□□□□□ -1.95
PCM1-219ENST00000523540 OPN1MW3P0DN78 364 aa2.86□□□□□ -1.95
PCM1-219ENST00000523540 PCMT1P22061 227 aa2.86□□□□□ -1.95
PCM1-219ENST00000523540 GLP1RP43220 463 aa2.86□□□□□ -1.95
PCM1-219ENST00000523540 VDAC2P45880 294 aaPredicted RBP2.86□□□□□ -1.95
PCM1-219ENST00000523540 CSNK1DP48730 415 aa2.86□□□□□ -1.95
PCM1-219ENST00000523540 EFNB2P52799 333 aa2.86□□□□□ -1.95
PCM1-219ENST00000523540 TNFRSF17Q02223 184 aa2.86□□□□□ -1.95
PCM1-219ENST00000523540 ASPHQ12797 758 aa2.86□□□□□ -1.95
PCM1-219ENST00000523540 KLRB1Q12918 225 aa2.86□□□□□ -1.95
PCM1-219ENST00000523540 DPYSL2Q16555 572 aa2.86□□□□□ -1.95
PCM1-219ENST00000523540 MICBQ29980 383 aa2.86□□□□□ -1.95
PCM1-219ENST00000523540 C6orf89Q6UWU4 347 aa2.86□□□□□ -1.95
PCM1-219ENST00000523540 GET4Q7L5D6 327 aaPredicted RBP2.86□□□□□ -1.95
PCM1-219ENST00000523540 NLRP9Q7RTR0 991 aa2.86□□□□□ -1.95
PCM1-219ENST00000523540 SLC26A11Q86WA9 606 aa2.86□□□□□ -1.95
PCM1-219ENST00000523540 OR9G1Q8NH87 305 aa2.86□□□□□ -1.95
PCM1-219ENST00000523540 NDRG1Q92597 394 aaKnown RBP2.86□□□□□ -1.95
PCM1-219ENST00000523540 CMTM7Q96FZ5 175 aa2.86□□□□□ -1.95
PCM1-219ENST00000523540 FCRL1Q96LA6 429 aa2.86□□□□□ -1.95
PCM1-219ENST00000523540 OXGR1Q96P68 337 aa2.86□□□□□ -1.95
PCM1-219ENST00000523540 RNF2Q99496 336 aa2.86□□□□□ -1.95
PCM1-219ENST00000523540 RBKSQ9H477 322 aa2.86□□□□□ -1.95
PCM1-219ENST00000523540 EML4Q9HC35 981 aaKnown RBP2.86□□□□□ -1.95
PCM1-219ENST00000523540 HOXC10Q9NYD6 342 aa2.86□□□□□ -1.95
PCM1-219ENST00000523540 SNX6Q9UNH7 406 aa2.86□□□□□ -1.95
PCM1-219ENST00000523540 MRPS7Q9Y2R9 242 aaKnown RBP2.86□□□□□ -1.95
PCM1-219ENST00000523540 NSG1A0A0A6YYJ2 146 aa2.85□□□□□ -1.95
PCM1-219ENST00000523540 A0A0G2JN53 185 aa2.85□□□□□ -1.95
PCM1-219ENST00000523540 IGHV3-64DA0A0J9YX35 117 aa2.85□□□□□ -1.95
PCM1-219ENST00000523540 KLK3P07288 261 aaPredicted RBP2.85□□□□□ -1.95
PCM1-219ENST00000523540 QARSP47897 775 aaKnown RBP2.85□□□□□ -1.95
PCM1-219ENST00000523540 ARRB1P49407 418 aaPredicted RBP2.85□□□□□ -1.95
PCM1-219ENST00000523540 OXA1LQ15070 435 aa2.85□□□□□ -1.95
PCM1-219ENST00000523540 ATP6AP1Q15904 470 aa2.85□□□□□ -1.95
PCM1-219ENST00000523540 BOLA3Q53S33 107 aa2.85□□□□□ -1.95
PCM1-219ENST00000523540 SFT2D3Q587I9 215 aa2.85□□□□□ -1.95
PCM1-219ENST00000523540 SAMD4BQ5PRF9 694 aaKnown RBP2.85□□□□□ -1.95
PCM1-219ENST00000523540 OR52E8Q6IFG1 317 aa2.85□□□□□ -1.95
PCM1-219ENST00000523540 PGAP1Q75T13 922 aa2.85□□□□□ -1.95
PCM1-219ENST00000523540 VSTM4Q8IW00 320 aa2.85□□□□□ -1.95
PCM1-219ENST00000523540 NPBQ8NG41 125 aa2.85□□□□□ -1.95
PCM1-219ENST00000523540 MARCH1Q8TCQ1 289 aa2.85□□□□□ -1.95
PCM1-219ENST00000523540 UBE2E3Q969T4 207 aa2.85□□□□□ -1.95
PCM1-219ENST00000523540 TM4SF19Q96DZ7 209 aa2.85□□□□□ -1.95
PCM1-219ENST00000523540 NAT9Q9BTE0 207 aa2.85□□□□□ -1.95
PCM1-219ENST00000523540 THUMPD1Q9NXG2 353 aaKnown RBP2.85□□□□□ -1.95
PCM1-219ENST00000523540 CLCF1Q9UBD9 225 aa2.85□□□□□ -1.95
PCM1-219ENST00000523540 BLOC1S6Q9UL45 172 aa2.85□□□□□ -1.95
PCM1-219ENST00000523540 ISY1Q9ULR0 285 aaKnown RBP2.85□□□□□ -1.95
PCM1-219ENST00000523540 MAGEB3O15480 346 aa2.84□□□□□ -1.95
PCM1-219ENST00000523540 ATP5LO75964 103 aa2.84□□□□□ -1.95
PCM1-219ENST00000523540 IGKV3-11P04433 115 aa2.84□□□□□ -1.95
PCM1-219ENST00000523540 PTMAP06454 111 aaKnown RBP2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms