RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 FANCFQ9NPI8 374 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 AKIP1Q9NQ31 210 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 SAR1AQ9NR31 198 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 MRGBPQ9NV56 204 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 LYARQ9NX58 379 aaKnown RBP5.77□□□□□ -1.49
SDCBP-210ENST00000522843 BCAP29Q9UHQ4 241 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 ZDHHC2Q9UIJ5 367 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 CES1P1Q9UKY3 287 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 AP4B1Q9Y6B7 739 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 A0A0J9YW62 118 aa5.76□□□□□ -1.49
SDCBP-210ENST00000522843 LOC390937A0A1W2PQ73 354 aa5.76□□□□□ -1.49
SDCBP-210ENST00000522843 B5MCH6 92 aa5.76□□□□□ -1.49
SDCBP-210ENST00000522843 TRIM77I1YAP6 450 aa5.76□□□□□ -1.49
SDCBP-210ENST00000522843 TNFSF11O14788 317 aa5.76□□□□□ -1.49
SDCBP-210ENST00000522843 ADAMDEC1O15204 470 aa5.76□□□□□ -1.49
SDCBP-210ENST00000522843 SLC22A2O15244 555 aa5.76□□□□□ -1.49
SDCBP-210ENST00000522843 SCO2O43819 266 aa5.76□□□□□ -1.49
SDCBP-210ENST00000522843 DCTN3O75935 186 aa5.76□□□□□ -1.49
SDCBP-210ENST00000522843 ATP5HO75947 161 aa5.76□□□□□ -1.49
SDCBP-210ENST00000522843 LYZL6O75951 148 aa5.76□□□□□ -1.49
SDCBP-210ENST00000522843 PGM3O95394 542 aa5.76□□□□□ -1.49
SDCBP-210ENST00000522843 GASTP01350 101 aa5.76□□□□□ -1.49
SDCBP-210ENST00000522843 TACSTD2P09758 323 aa5.76□□□□□ -1.49
SDCBP-210ENST00000522843 PSMA4P25789 261 aaKnown RBP5.76□□□□□ -1.49
SDCBP-210ENST00000522843 PIK3R1P27986 724 aa5.76□□□□□ -1.49
SDCBP-210ENST00000522843 SHC1P29353 583 aa5.76□□□□□ -1.49
SDCBP-210ENST00000522843 MTNR1BP49286 362 aa5.76□□□□□ -1.49
SDCBP-210ENST00000522843 DVL1P1P54792 670 aaPredicted RBP5.76□□□□□ -1.49
SDCBP-210ENST00000522843 PKNOX1P55347 436 aa5.76□□□□□ -1.49
SDCBP-210ENST00000522843 MRPS35P82673 323 aaKnown RBP5.76□□□□□ -1.49
SDCBP-210ENST00000522843 IRF8Q02556 426 aa5.76□□□□□ -1.49
SDCBP-210ENST00000522843 STX5Q13190 355 aa5.76□□□□□ -1.49
SDCBP-210ENST00000522843 ITGADQ13349 1161 aa5.76□□□□□ -1.49
SDCBP-210ENST00000522843 DDX39BQ13838 428 aaKnown RBP5.76□□□□□ -1.49
SDCBP-210ENST00000522843 GANABQ14697 944 aaKnown RBP5.76□□□□□ -1.49
SDCBP-210ENST00000522843 KRT72Q14CN4 511 aa5.76□□□□□ -1.49
SDCBP-210ENST00000522843 TRIP10Q15642 601 aa5.76□□□□□ -1.49
SDCBP-210ENST00000522843 STK11Q15831 433 aa5.76□□□□□ -1.49
SDCBP-210ENST00000522843 CARTPTQ16568 116 aa5.76□□□□□ -1.49
SDCBP-210ENST00000522843 IQCCQ4KMZ1 466 aa5.76□□□□□ -1.49
SDCBP-210ENST00000522843 PDCD4Q53EL6 469 aaKnown RBP5.76□□□□□ -1.49
SDCBP-210ENST00000522843 ZNF544Q6NX49 715 aa5.76□□□□□ -1.49
SDCBP-210ENST00000522843 FAM180BQ6P0A1 224 aa5.76□□□□□ -1.49
SDCBP-210ENST00000522843 MED27Q6P2C8 311 aa5.76□□□□□ -1.49
SDCBP-210ENST00000522843 ZCCHC23Q6ZST2 131 aa5.76□□□□□ -1.49
SDCBP-210ENST00000522843 USP43Q70EL4 1123 aa5.76□□□□□ -1.49
SDCBP-210ENST00000522843 TRPM8Q7Z2W7 1104 aa5.76□□□□□ -1.49
SDCBP-210ENST00000522843 SVOPLQ8N434 492 aa5.76□□□□□ -1.49
SDCBP-210ENST00000522843 PTGR2Q8N8N7 351 aaPredicted RBP5.76□□□□□ -1.49
SDCBP-210ENST00000522843 RFWD2Q8NHY2 731 aa5.76□□□□□ -1.49
SDCBP-210ENST00000522843 ACTRT2Q8TDY3 377 aa5.76□□□□□ -1.49
SDCBP-210ENST00000522843 RNF128Q8TEB7 428 aa5.76□□□□□ -1.49
SDCBP-210ENST00000522843 TSPEARQ8WU66 669 aa5.76□□□□□ -1.49
SDCBP-210ENST00000522843 EFHD2Q96C19 240 aaPredicted RBP5.76□□□□□ -1.49
SDCBP-210ENST00000522843 TMEM237Q96Q45 408 aa5.76□□□□□ -1.49
SDCBP-210ENST00000522843 PKP2Q99959 881 aa5.76□□□□□ -1.49
SDCBP-210ENST00000522843 CCDC28BQ9BUN5 200 aa5.76□□□□□ -1.49
SDCBP-210ENST00000522843 SRXN1Q9BYN0 137 aa5.76□□□□□ -1.49
SDCBP-210ENST00000522843 GLRX2Q9NS18 164 aa5.76□□□□□ -1.49
SDCBP-210ENST00000522843 PNPOQ9NVS9 261 aa5.76□□□□□ -1.49
SDCBP-210ENST00000522843 TMEM45AQ9NWC5 275 aa5.76□□□□□ -1.49
SDCBP-210ENST00000522843 STK38LQ9Y2H1 464 aa5.76□□□□□ -1.49
SDCBP-210ENST00000522843 WBP11Q9Y2W2 641 aaKnown RBP5.76□□□□□ -1.49
SDCBP-210ENST00000522843 SACSQ9NZJ4 4579 aa5.75□□□□□ -1.49
SDCBP-210ENST00000522843 HEATR1Q9H583 2144 aaKnown RBP5.75□□□□□ -1.49
SDCBP-210ENST00000522843 TRPC5OSA6NMA1 111 aa5.75□□□□□ -1.49
SDCBP-210ENST00000522843 UBXN8O00124 270 aa5.75□□□□□ -1.49
SDCBP-210ENST00000522843 CCDC22O60826 627 aa5.75□□□□□ -1.49
SDCBP-210ENST00000522843 STK16O75716 305 aa5.75□□□□□ -1.49
SDCBP-210ENST00000522843 SUPT7LO94864 414 aa5.75□□□□□ -1.49
SDCBP-210ENST00000522843 STAMBPO95630 424 aa5.75□□□□□ -1.49
SDCBP-210ENST00000522843 ESRRBO95718 433 aa5.75□□□□□ -1.49
SDCBP-210ENST00000522843 HSPA4LO95757 839 aa5.75□□□□□ -1.49
SDCBP-210ENST00000522843 ATP1B1P05026 303 aa5.75□□□□□ -1.49
SDCBP-210ENST00000522843 CHRNGP07510 517 aa5.75□□□□□ -1.49
SDCBP-210ENST00000522843 HKR1P10072 659 aa5.75□□□□□ -1.49
SDCBP-210ENST00000522843 PORP16435 677 aaPredicted RBP5.75□□□□□ -1.49
SDCBP-210ENST00000522843 IGHV1-2P23083 117 aa5.75□□□□□ -1.49
SDCBP-210ENST00000522843 EVI2BP34910 448 aa5.75□□□□□ -1.49
SDCBP-210ENST00000522843 RBMXP38159 391 aaKnown RBP5.75□□□□□ -1.49
SDCBP-210ENST00000522843 FEN1P39748 380 aaKnown RBP5.75□□□□□ -1.49
SDCBP-210ENST00000522843 PIK3CGP48736 1102 aa5.75□□□□□ -1.49
SDCBP-210ENST00000522843 MRPL19P49406 292 aaKnown RBP5.75□□□□□ -1.49
SDCBP-210ENST00000522843 ZNF83P51522 516 aa5.75□□□□□ -1.49
SDCBP-210ENST00000522843 RAP1GDS1P52306 607 aa5.75□□□□□ -1.49
SDCBP-210ENST00000522843 BNIP1Q12981 228 aa5.75□□□□□ -1.49
SDCBP-210ENST00000522843 LCP2Q13094 533 aa5.75□□□□□ -1.49
SDCBP-210ENST00000522843 EFR3AQ14156 821 aa5.75□□□□□ -1.49
SDCBP-210ENST00000522843 HIST2H2ACQ16777 129 aaPredicted RBP5.75□□□□□ -1.49
SDCBP-210ENST00000522843 PFKFB4Q16877 469 aa5.75□□□□□ -1.49
SDCBP-210ENST00000522843 SMU1Q2TAY7 513 aa5.75□□□□□ -1.49
SDCBP-210ENST00000522843 GLYR1Q49A26 553 aaPredicted RBP5.75□□□□□ -1.49
SDCBP-210ENST00000522843 PAGE2BQ5JRK9 111 aa5.75□□□□□ -1.49
SDCBP-210ENST00000522843 CFAP157Q5JU67 520 aa5.75□□□□□ -1.49
SDCBP-210ENST00000522843 HIST2H2AA3Q6FI13 130 aa5.75□□□□□ -1.49
SDCBP-210ENST00000522843 SLC22A25Q6T423 547 aa5.75□□□□□ -1.49
SDCBP-210ENST00000522843 APOOLQ6UXV4 268 aa5.75□□□□□ -1.49
SDCBP-210ENST00000522843 FITM2Q8N6M3 262 aa5.75□□□□□ -1.49
SDCBP-210ENST00000522843 ZNF781Q8N8C0 355 aa5.75□□□□□ -1.49
SDCBP-210ENST00000522843 OR4K14Q8NGD5 310 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms