RNA–Protein interactions for RNA: ENST00000521578.5

PTP4A3-204, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTP4A3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-204ENST00000521578 SSX1Q16384 188 aa20.07■□□□□ 0.8
PTP4A3-204ENST00000521578 NTRK2Q16620 822 aa20.07■□□□□ 0.8
PTP4A3-204ENST00000521578 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.07■□□□□ 0.88e-6■■■■■ 36.9
PTP4A3-204ENST00000521578 ZSWIM7Q19AV6 140 aa20.07■□□□□ 0.8
PTP4A3-204ENST00000521578 TMEM44Q2T9K0 475 aa20.07■□□□□ 0.8
PTP4A3-204ENST00000521578 ZNF613Q6PF04 617 aa20.07■□□□□ 0.8
PTP4A3-204ENST00000521578 C16orf87Q6PH81 154 aa20.07■□□□□ 0.8
PTP4A3-204ENST00000521578 ASB18Q6ZVZ8 466 aa20.07■□□□□ 0.8
PTP4A3-204ENST00000521578 MDGA2Q7Z553 956 aa20.07■□□□□ 0.8
PTP4A3-204ENST00000521578 ZADH2Q8N4Q0 377 aa20.07■□□□□ 0.8
PTP4A3-204ENST00000521578 OIT3Q8WWZ8 545 aa20.07■□□□□ 0.8
PTP4A3-204ENST00000521578 TM9SF4Q92544 642 aa20.07■□□□□ 0.8
PTP4A3-204ENST00000521578 PCDHGB7Q9Y5F8 929 aa20.07■□□□□ 0.8
PTP4A3-204ENST00000521578 ATRXP46100 2492 aa20.07■□□□□ 0.8
PTP4A3-204ENST00000521578 TLN1Q9Y490 2541 aaKnown RBP20.06■□□□□ 0.8
PTP4A3-204ENST00000521578 SURF4O15260 269 aa20.06■□□□□ 0.8
PTP4A3-204ENST00000521578 NEURL1O76050 574 aa20.06■□□□□ 0.8
PTP4A3-204ENST00000521578 IL33O95760 270 aa20.06■□□□□ 0.8
PTP4A3-204ENST00000521578 ZNF12P17014 697 aa20.06■□□□□ 0.8
PTP4A3-204ENST00000521578 NAGAP17050 411 aa20.06■□□□□ 0.8
PTP4A3-204ENST00000521578 LCN1P31025 176 aa20.06■□□□□ 0.8
PTP4A3-204ENST00000521578 IDUAP35475 653 aa20.06■□□□□ 0.8
PTP4A3-204ENST00000521578 PRKCDQ05655 676 aa20.06■□□□□ 0.8
PTP4A3-204ENST00000521578 IGFL3Q6UXB1 125 aa20.06■□□□□ 0.8
PTP4A3-204ENST00000521578 WDR88Q6ZMY6 472 aa20.06■□□□□ 0.8
PTP4A3-204ENST00000521578 Q6ZNX1 250 aa20.06■□□□□ 0.8
PTP4A3-204ENST00000521578 ANKK1Q8NFD2 765 aa20.06■□□□□ 0.8
PTP4A3-204ENST00000521578 TMEM239Q8WW34 195 aa20.06■□□□□ 0.8
PTP4A3-204ENST00000521578 SLC35B4Q969S0 331 aa20.06■□□□□ 0.8
PTP4A3-204ENST00000521578 HOXD1Q9GZZ0 328 aa20.06■□□□□ 0.8
PTP4A3-204ENST00000521578 MMP27Q9H306 513 aa20.06■□□□□ 0.8
PTP4A3-204ENST00000521578 HHATLQ9HCP6 504 aa20.06■□□□□ 0.8
PTP4A3-204ENST00000521578 TUBD1Q9UJT1 453 aa20.06■□□□□ 0.8
PTP4A3-204ENST00000521578 UNC119BA6NIH7 251 aa20.05■□□□□ 0.8
PTP4A3-204ENST00000521578 OR6C70A6NIJ9 312 aa20.05■□□□□ 0.8
PTP4A3-204ENST00000521578 METTL15A6NJ78 407 aa20.05■□□□□ 0.8
PTP4A3-204ENST00000521578 ERVH48-1M5A8F1 160 aa20.05■□□□□ 0.8
PTP4A3-204ENST00000521578 CDC42EP2O14613 210 aa20.05■□□□□ 0.8
PTP4A3-204ENST00000521578 HMGN1P05114 100 aa20.05■□□□□ 0.8
PTP4A3-204ENST00000521578 TNFSF10P50591 281 aa20.05■□□□□ 0.8
PTP4A3-204ENST00000521578 PNLIPRP2P54317 469 aa20.05■□□□□ 0.8
PTP4A3-204ENST00000521578 ZNF141Q15928 474 aa20.05■□□□□ 0.8
PTP4A3-204ENST00000521578 PGGHGQ32M88 737 aa20.05■□□□□ 0.8
PTP4A3-204ENST00000521578 CLEC12AQ5QGZ9 265 aa20.05■□□□□ 0.8
PTP4A3-204ENST00000521578 MFSD4AQ8N468 514 aa20.05■□□□□ 0.8
PTP4A3-204ENST00000521578 NXF2Q9GZY0 626 aaKnown RBP20.05■□□□□ 0.8
PTP4A3-204ENST00000521578 TMEM27Q9HBJ8 222 aa20.05■□□□□ 0.8
PTP4A3-204ENST00000521578 CCDC59Q9P031 241 aaKnown RBP20.05■□□□□ 0.8
PTP4A3-204ENST00000521578 EML6Q6ZMW3 1958 aa20.05■□□□□ 0.8
PTP4A3-204ENST00000521578 NPIPB9F8W1W9 429 aa20.05■□□□□ 0.8
PTP4A3-204ENST00000521578 PDZK1Q5T2W1 519 aa20.05■□□□□ 0.8
PTP4A3-204ENST00000521578 AADACL4Q5VUY2 407 aa20.05■□□□□ 0.8
PTP4A3-204ENST00000521578 GDPGP1Q6ZNW5 385 aa20.05■□□□□ 0.8
PTP4A3-204ENST00000521578 RTL4Q6ZR62 310 aa20.05■□□□□ 0.8
PTP4A3-204ENST00000521578 IGFN1Q86VF2 1251 aa20.05■□□□□ 0.8
PTP4A3-204ENST00000521578 GPALPP1Q8IXQ4 340 aa20.05■□□□□ 0.8
PTP4A3-204ENST00000521578 DND1Q8IYX4 353 aaKnown RBP20.05■□□□□ 0.8
PTP4A3-204ENST00000521578 TMCO5AQ8N6Q1 288 aa20.05■□□□□ 0.8
PTP4A3-204ENST00000521578 CNOT9Q92600 299 aaKnown RBP20.05■□□□□ 0.8
PTP4A3-204ENST00000521578 RNFT2Q96EX2 444 aa20.05■□□□□ 0.8
PTP4A3-204ENST00000521578 SGCZQ96LD1 299 aa20.05■□□□□ 0.8
PTP4A3-204ENST00000521578 HS6ST2Q96MM7 605 aa20.05■□□□□ 0.8
PTP4A3-204ENST00000521578 CHCHD6Q9BRQ6 235 aa20.05■□□□□ 0.8
PTP4A3-204ENST00000521578 CENPOQ9BU64 300 aa20.05■□□□□ 0.8
PTP4A3-204ENST00000521578 MFRPQ9BY79 579 aa20.05■□□□□ 0.8
PTP4A3-204ENST00000521578 FLRT3Q9NZU0 649 aa20.05■□□□□ 0.8
PTP4A3-204ENST00000521578 LOC100506127A0A0U1RQW1 187 aa20.04■□□□□ 0.8
PTP4A3-204ENST00000521578 TP53I11O14683 189 aa20.04■□□□□ 0.8
PTP4A3-204ENST00000521578 ICOSLGO75144 302 aa20.04■□□□□ 0.8
PTP4A3-204ENST00000521578 SLC25A12O75746 678 aa20.04■□□□□ 0.8
PTP4A3-204ENST00000521578 MLLT11Q13015 90 aaPredicted RBP20.04■□□□□ 0.8
PTP4A3-204ENST00000521578 C1DQ13901 141 aaKnown RBP20.04■□□□□ 0.8
PTP4A3-204ENST00000521578 LY6DQ14210 128 aa20.04■□□□□ 0.8
PTP4A3-204ENST00000521578 ZNF404Q494X3 552 aa20.04■□□□□ 0.8
PTP4A3-204ENST00000521578 SLC30A6Q6NXT4 461 aa20.04■□□□□ 0.8
PTP4A3-204ENST00000521578 TMPRSS11FQ6ZWK6 438 aa20.04■□□□□ 0.8
PTP4A3-204ENST00000521578 NUP54Q7Z3B4 507 aa20.04■□□□□ 0.8
PTP4A3-204ENST00000521578 MDS2Q8NDY4 140 aa20.04■□□□□ 0.8
PTP4A3-204ENST00000521578 OR2T33Q8NG76 320 aa20.04■□□□□ 0.8
PTP4A3-204ENST00000521578 MCFD2Q8NI22 146 aa20.04■□□□□ 0.8
PTP4A3-204ENST00000521578 HGDQ93099 445 aa20.04■□□□□ 0.8
PTP4A3-204ENST00000521578 RFKQ969G6 155 aa20.04■□□□□ 0.8
PTP4A3-204ENST00000521578 HES7Q9BYE0 225 aa20.04■□□□□ 0.8
PTP4A3-204ENST00000521578 KLHL1Q9NR64 748 aa20.04■□□□□ 0.8
PTP4A3-204ENST00000521578 ST6GALNAC1Q9NSC7 600 aaPredicted RBP20.04■□□□□ 0.8
PTP4A3-204ENST00000521578 TMEM5Q9Y2B1 443 aa20.04■□□□□ 0.8
PTP4A3-204ENST00000521578 GPR52Q9Y2T5 361 aa20.04■□□□□ 0.8
PTP4A3-204ENST00000521578 CHCHD2Q9Y6H1 151 aaPredicted RBP20.04■□□□□ 0.8
PTP4A3-204ENST00000521578 MYL12BO14950 172 aa20.03■□□□□ 0.8
PTP4A3-204ENST00000521578 CCL3P10147 92 aa20.03■□□□□ 0.8
PTP4A3-204ENST00000521578 MTNR1AP48039 350 aa20.03■□□□□ 0.8
PTP4A3-204ENST00000521578 EFR3AQ14156 821 aa20.03■□□□□ 0.8
PTP4A3-204ENST00000521578 BICRALQ6AI39 1079 aa20.03■□□□□ 0.8
PTP4A3-204ENST00000521578 PCSK4Q6UW60 755 aa20.03■□□□□ 0.8
PTP4A3-204ENST00000521578 RBMXL3Q8N7X1 1067 aaKnown RBP20.03■□□□□ 0.8
PTP4A3-204ENST00000521578 ZNF527Q8NB42 609 aa20.03■□□□□ 0.8
PTP4A3-204ENST00000521578 PSD4Q8NDX1 1056 aa20.03■□□□□ 0.8
PTP4A3-204ENST00000521578 SAMD8Q96LT4 415 aa20.03■□□□□ 0.8
PTP4A3-204ENST00000521578 RYDENQ9NUL5 291 aaKnown RBP20.03■□□□□ 0.8
PTP4A3-204ENST00000521578 DNAJB12Q9NXW2 375 aaKnown RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms