RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 OR9K2Q8NGE7 335 aa10□□□□□ -0.81
MRPS28-206ENST00000520946 OR1K1Q8NGR3 316 aa10□□□□□ -0.81
MRPS28-206ENST00000520946 ZFAND2BQ8WV99 257 aa10□□□□□ -0.81
MRPS28-206ENST00000520946 UBLCP1Q8WVY7 318 aaPredicted RBP10□□□□□ -0.81
MRPS28-206ENST00000520946 TMEM45BQ96B21 275 aa10□□□□□ -0.81
MRPS28-206ENST00000520946 ROPN1LQ96C74 230 aa10□□□□□ -0.81
MRPS28-206ENST00000520946 C16orf45Q96MC5 204 aaPredicted RBP10□□□□□ -0.81
MRPS28-206ENST00000520946 SAP130Q9H0E3 1048 aa10□□□□□ -0.81
MRPS28-206ENST00000520946 EXOSC3Q9NQT5 275 aaKnown RBP10□□□□□ -0.81
MRPS28-206ENST00000520946 ADPRHL2Q9NX46 363 aa10□□□□□ -0.81
MRPS28-206ENST00000520946 NOX1Q9Y5S8 564 aa10□□□□□ -0.81
MRPS28-206ENST00000520946 ANK3Q12955 4377 aaKnown RBP10□□□□□ -0.81
MRPS28-206ENST00000520946 ARFGEF3Q5TH69 2177 aa9.99□□□□□ -0.81
MRPS28-206ENST00000520946 NR5A2O00482 541 aa9.99□□□□□ -0.81
MRPS28-206ENST00000520946 NPHS1O60500 1241 aa9.99□□□□□ -0.81
MRPS28-206ENST00000520946 ADRA2AP08913 450 aa9.99□□□□□ -0.81
MRPS28-206ENST00000520946 TACSTD2P09758 323 aa9.99□□□□□ -0.81
MRPS28-206ENST00000520946 CECR9P0C854 216 aa9.99□□□□□ -0.81
MRPS28-206ENST00000520946 IL7RP16871 459 aa9.99□□□□□ -0.81
MRPS28-206ENST00000520946 UQCRC2P22695 453 aa9.99□□□□□ -0.81
MRPS28-206ENST00000520946 GTF2E2P29084 291 aaKnown RBP9.99□□□□□ -0.81
MRPS28-206ENST00000520946 IL2RGP31785 369 aa9.99□□□□□ -0.81
MRPS28-206ENST00000520946 COPZ1P61923 177 aa9.99□□□□□ -0.81
MRPS28-206ENST00000520946 TUBA1BP68363 451 aa9.99□□□□□ -0.81
MRPS28-206ENST00000520946 TUBA4AP68366 448 aa9.99□□□□□ -0.81
MRPS28-206ENST00000520946 NPRL3Q12980 569 aa9.99□□□□□ -0.81
MRPS28-206ENST00000520946 PCLAFQ15004 111 aa9.99□□□□□ -0.81
MRPS28-206ENST00000520946 ANXA8L1Q5VT79 327 aa9.99□□□□□ -0.81
MRPS28-206ENST00000520946 TYW3Q6IPR3 259 aaKnown RBP9.99□□□□□ -0.81
MRPS28-206ENST00000520946 NIPAL3Q6P499 406 aa9.99□□□□□ -0.81
MRPS28-206ENST00000520946 ZCCHC23Q6ZST2 131 aa9.99□□□□□ -0.81
MRPS28-206ENST00000520946 TUBA1AQ71U36 451 aa9.99□□□□□ -0.81
MRPS28-206ENST00000520946 CMIPQ8IY22 773 aa9.99□□□□□ -0.81
MRPS28-206ENST00000520946 CLECL1Q8IZS7 167 aa9.99□□□□□ -0.81
MRPS28-206ENST00000520946 TMEM99Q8N816 258 aa9.99□□□□□ -0.81
MRPS28-206ENST00000520946 MZB1Q8WU39 189 aa9.99□□□□□ -0.81
MRPS28-206ENST00000520946 CKAP2Q8WWK9 683 aa9.99□□□□□ -0.81
MRPS28-206ENST00000520946 ZNF385AQ96PM9 386 aaKnown RBP9.99□□□□□ -0.81
MRPS28-206ENST00000520946 ZNF317Q96PQ6 595 aaPredicted RBP9.99□□□□□ -0.81
MRPS28-206ENST00000520946 ALKBH3Q96Q83 286 aaPredicted RBP9.99□□□□□ -0.81
MRPS28-206ENST00000520946 JMJD8Q96S16 334 aa9.99□□□□□ -0.81
MRPS28-206ENST00000520946 SERHL2Q9H4I8 314 aa9.99□□□□□ -0.81
MRPS28-206ENST00000520946 PIF1Q9H611 641 aa9.99□□□□□ -0.81
MRPS28-206ENST00000520946 NARFLQ9H6Q4 476 aa9.99□□□□□ -0.81
MRPS28-206ENST00000520946 PPCSQ9HAB8 311 aa9.99□□□□□ -0.81
MRPS28-206ENST00000520946 CACYBPQ9HB71 228 aaKnown RBP9.99□□□□□ -0.81
MRPS28-206ENST00000520946 LPAR2Q9HBW0 351 aa9.99□□□□□ -0.81
MRPS28-206ENST00000520946 OSGIN1Q9UJX0 560 aa9.99□□□□□ -0.81
MRPS28-206ENST00000520946 SPEF1Q9Y4P9 236 aa9.99□□□□□ -0.81
MRPS28-206ENST00000520946 CUBNO60494 3623 aa9.99□□□□□ -0.81
MRPS28-206ENST00000520946 CFAP73A6NFT4 308 aa9.98□□□□□ -0.81
MRPS28-206ENST00000520946 RNASET2O00584 256 aaKnown RBP9.98□□□□□ -0.81
MRPS28-206ENST00000520946 LILRA1O75019 489 aa9.98□□□□□ -0.81
MRPS28-206ENST00000520946 VAMP5O95183 116 aa9.98□□□□□ -0.81
MRPS28-206ENST00000520946 VENTXO95231 258 aa9.98□□□□□ -0.81
MRPS28-206ENST00000520946 G6PDP11413 515 aa9.98□□□□□ -0.81
MRPS28-206ENST00000520946 IMPDH2P12268 514 aa9.98□□□□□ -0.81
MRPS28-206ENST00000520946 ALDH3A1P30838 453 aa9.98□□□□□ -0.81
MRPS28-206ENST00000520946 THBS4P35443 961 aa9.98□□□□□ -0.81
MRPS28-206ENST00000520946 SH3BGRP55822 239 aaPredicted RBP9.98□□□□□ -0.81
MRPS28-206ENST00000520946 CLDN8P56748 225 aa9.98□□□□□ -0.81
MRPS28-206ENST00000520946 LGALS3BPQ08380 585 aa9.98□□□□□ -0.81
MRPS28-206ENST00000520946 DAG1Q14118 895 aa9.98□□□□□ -0.81
MRPS28-206ENST00000520946 UGT3A2Q3SY77 523 aa9.98□□□□□ -0.81
MRPS28-206ENST00000520946 FAM174BQ3ZCQ3 159 aa9.98□□□□□ -0.81
MRPS28-206ENST00000520946 ZNF311Q5JNZ3 666 aa9.98□□□□□ -0.81
MRPS28-206ENST00000520946 PRAMEF8Q5VWM4 474 aa9.98□□□□□ -0.81
MRPS28-206ENST00000520946 PRAMEF7Q5VXH5 474 aa9.98□□□□□ -0.81
MRPS28-206ENST00000520946 FAHD2BQ6P2I3 314 aaPredicted RBP9.98□□□□□ -0.81
MRPS28-206ENST00000520946 THSD4Q6ZMP0 1018 aa9.98□□□□□ -0.81
MRPS28-206ENST00000520946 ANKRD46Q86W74 232 aa9.98□□□□□ -0.81
MRPS28-206ENST00000520946 ZCCHC24Q8N2G6 241 aaKnown RBP9.98□□□□□ -0.81
MRPS28-206ENST00000520946 CADM2Q8N3J6 435 aa9.98□□□□□ -0.81
MRPS28-206ENST00000520946 FAM71CQ8NEG0 241 aa9.98□□□□□ -0.81
MRPS28-206ENST00000520946 NUP37Q8NFH4 326 aa9.98□□□□□ -0.81
MRPS28-206ENST00000520946 CNOT9Q92600 299 aaKnown RBP9.98□□□□□ -0.81
MRPS28-206ENST00000520946 FAHD2AQ96GK7 314 aa9.98□□□□□ -0.81
MRPS28-206ENST00000520946 TPK1Q9H3S4 243 aa9.98□□□□□ -0.81
MRPS28-206ENST00000520946 ZNF442Q9H7R0 627 aa9.98□□□□□ -0.81
MRPS28-206ENST00000520946 CRLF2Q9HC73 371 aa9.98□□□□□ -0.81
MRPS28-206ENST00000520946 NOP53Q9NZM5 478 aaKnown RBP9.98□□□□□ -0.81
MRPS28-206ENST00000520946 MARCOQ9UEW3 520 aaPredicted RBP9.98□□□□□ -0.81
MRPS28-206ENST00000520946 PCDHB10Q9UN67 800 aa9.98□□□□□ -0.81
MRPS28-206ENST00000520946 CMAHPQ9Y471 501 aa9.98□□□□□ -0.81
MRPS28-206ENST00000520946 ARPC4-TTLL3A0A0A6YYG9 625 aa9.97□□□□□ -0.81
MRPS28-206ENST00000520946 AQP7P3A6NL99 342 aa9.97□□□□□ -0.81
MRPS28-206ENST00000520946 CLDN24A6NM45 220 aa9.97□□□□□ -0.81
MRPS28-206ENST00000520946 AP3D1O14617 1153 aa9.97□□□□□ -0.81
MRPS28-206ENST00000520946 BCAS1O75363 584 aaPredicted RBP9.97□□□□□ -0.81
MRPS28-206ENST00000520946 GUSBP08236 651 aa9.97□□□□□ -0.81
MRPS28-206ENST00000520946 HOXB1P14653 301 aaPredicted RBP9.97□□□□□ -0.81
MRPS28-206ENST00000520946 NCF2P19878 526 aaPredicted RBP9.97□□□□□ -0.81
MRPS28-206ENST00000520946 ARR3P36575 388 aa9.97□□□□□ -0.81
MRPS28-206ENST00000520946 GPR6P46095 362 aaPredicted RBP9.97□□□□□ -0.81
MRPS28-206ENST00000520946 SELENOPP49908 381 aa9.97□□□□□ -0.81
MRPS28-206ENST00000520946 ROR2Q01974 943 aaKnown RBP9.97□□□□□ -0.81
MRPS28-206ENST00000520946 TRIP10Q15642 601 aa9.97□□□□□ -0.81
MRPS28-206ENST00000520946 GSTA3Q16772 222 aa9.97□□□□□ -0.81
MRPS28-206ENST00000520946 ZSWIM7Q19AV6 140 aa9.97□□□□□ -0.81
MRPS28-206ENST00000520946 C3orf36Q3SXR2 165 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms