RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-209	ENST00000519141	C1orf140	Q5VVS0	124 aa		11.21	□□□□□ -0.61
SPIDR-209	ENST00000519141	HIST3H2A	Q7L7L0	130 aa		11.21	□□□□□ -0.61
SPIDR-209	ENST00000519141	MDGA2	Q7Z553	956 aa		11.21	□□□□□ -0.61
SPIDR-209	ENST00000519141	BCDIN3D	Q7Z5W3	292 aa	Known RBP	11.21	□□□□□ -0.61
SPIDR-209	ENST00000519141	STX19	Q8N4C7	294 aa		11.21	□□□□□ -0.61
SPIDR-209	ENST00000519141	ZCCHC14	Q8WYQ9	949 aa	Known RBP	11.21	□□□□□ -0.61
SPIDR-209	ENST00000519141	FGF11	Q92914	225 aa		11.21	□□□□□ -0.61
SPIDR-209	ENST00000519141	HIST1H2AC	Q93077	130 aa		11.21	□□□□□ -0.61
SPIDR-209	ENST00000519141	ZNF582	Q96NG8	517 aa	Predicted RBP	11.21	□□□□□ -0.61
SPIDR-209	ENST00000519141	CMC2	Q9NRP2	79 aa		11.21	□□□□□ -0.61
SPIDR-209	ENST00000519141	STMN3	Q9NZ72	180 aa		11.21	□□□□□ -0.61
SPIDR-209	ENST00000519141	NDUFA13	Q9P0J0	144 aa		11.21	□□□□□ -0.61
SPIDR-209	ENST00000519141	HIF3A	Q9Y2N7	669 aa		11.21	□□□□□ -0.61
SPIDR-209	ENST00000519141	RPL36	Q9Y3U8	105 aa	Known RBP	11.21	□□□□□ -0.61
SPIDR-209	ENST00000519141		A0A087WZY1	265 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	KDM4E	B2RXH2	506 aa	Predicted RBP	11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	MCIDAS	D6RGH6	385 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141		G3V3Y1	287 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	TAF4	O00268	1085 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	PRODH	O43272	600 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	NPIPB7	O75200	414 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	IFNG	P01579	166 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	BGLAP	P02818	100 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	CDK1	P06493	297 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	ASAH2B	P0C7U1	165 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	DBT	P11182	482 aa	Known RBP	11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	PIP	P12273	146 aa	Predicted RBP	11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	JUNB	P17275	347 aa	Predicted RBP	11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	MAP2K6	P52564	334 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	MVK	Q03426	396 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	LTB	Q06643	244 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	GXYLT1	Q4G148	440 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	SLC35F1	Q5T1Q4	408 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	FAM69A	Q5T7M9	428 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	ATP1A1-AS1	Q5TC04	95 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	DPY19L2P2	Q6ZN68	376 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	MAMDC2	Q7Z304	686 aa	Predicted RBP	11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	GPR141	Q7Z602	305 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	PSD4	Q8NDX1	1056 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	ANKK1	Q8NFD2	765 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	OR1J4	Q8NGS1	313 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	THAP4	Q8WY91	577 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	RFK	Q969G6	155 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	NTNG2	Q96CW9	530 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	DDIT4L	Q96D03	193 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	TMEM41A	Q96HV5	264 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	JSRP1	Q96MG2	331 aa	Predicted RBP	11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	ERMAP	Q96PL5	475 aa	Predicted RBP	11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	SIGLEC11	Q96RL6	698 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	NPAS1	Q99742	590 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	PTDSS2	Q9BVG9	487 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	OR11A1	Q9GZK7	315 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	FN3K	Q9H479	309 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	PROK2	Q9HC23	129 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	SERINC1	Q9NRX5	453 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	SPIN1	Q9Y657	262 aa	Predicted RBP	11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	ARGFX	A6NJG6	315 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	SHISA8	B8ZZ34	492 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	BLOC1S5-TXNDC5	H3BN57	136 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	ZNF208	O43345	1280 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	OR2T1	O43869	369 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	SLC2A10	O95528	541 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	FADS2	O95864	444 aa	Known RBP	11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	PEPD	P12955	493 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	ZNF3	P17036	446 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	HK1	P19367	917 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	UQCRC1	P31930	480 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	EIF1	P41567	113 aa	Known RBP	11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	SLC15A1	P46059	708 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	ST3GAL4	Q11206	333 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	C1QL3	Q5VWW1	255 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	TIGD3	Q6B0B8	471 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	XAF1	Q6GPH4	301 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	CCDC81	Q6ZN84	652 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	CXXC5	Q7LFL8	322 aa	Known RBP	11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	IGFN1	Q86VF2	1251 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	MOSPD2	Q8NHP6	518 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	ZBTB8A	Q96BR9	441 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	SLC25A36	Q96CQ1	311 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	GPX7	Q96SL4	187 aa	Predicted RBP	11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	UTP23	Q9BRU9	249 aa	Known RBP	11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	TIMMDC1	Q9NPL8	285 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	HINT3	Q9NQE9	182 aa	Known RBP	11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	DKKL1	Q9UK85	242 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	SLC6A5	Q9Y345	797 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	PCDHGB1	Q9Y5G3	927 aa		11.2	□□□□□ -0.62
SPIDR-209	ENST00000519141	MGA	Q8IWI9	3026 aa		11.19	□□□□□ -0.62
SPIDR-209	ENST00000519141	MED13	Q9UHV7	2174 aa		11.19	□□□□□ -0.62
SPIDR-209	ENST00000519141	TRABD2B	A6NFA1	517 aa		11.19	□□□□□ -0.62
SPIDR-209	ENST00000519141		M0R3G1	203 aa		11.19	□□□□□ -0.62
SPIDR-209	ENST00000519141	STS	P08842	583 aa		11.19	□□□□□ -0.62
SPIDR-209	ENST00000519141	PRKAR1A	P10644	381 aa		11.19	□□□□□ -0.62
SPIDR-209	ENST00000519141	TFPI	P10646	304 aa		11.19	□□□□□ -0.62
SPIDR-209	ENST00000519141	PCMT1	P22061	227 aa		11.19	□□□□□ -0.62
SPIDR-209	ENST00000519141	PAICS	P22234	425 aa	Known RBP	11.19	□□□□□ -0.62
SPIDR-209	ENST00000519141	TCEA1	P23193	301 aa	Known RBP	11.19	□□□□□ -0.62
SPIDR-209	ENST00000519141	DPP4	P27487	766 aa		11.19	□□□□□ -0.62
SPIDR-209	ENST00000519141	TTK	P33981	857 aa		11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms