RNA–Protein interactions for RNA: ENST00000519113.5

CTNNA1-213, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-213ENST00000519113 GIN1Q9NXP7 522 aa16.69■□□□□ 0.26
CTNNA1-213ENST00000519113 EMC3Q9P0I2 261 aa16.69■□□□□ 0.26
CTNNA1-213ENST00000519113 LOC100289279A0A1B0GTE1 492 aa16.68■□□□□ 0.26
CTNNA1-213ENST00000519113 SCAMP2O15127 329 aaKnown RBP16.68■□□□□ 0.26
CTNNA1-213ENST00000519113 OIP5O43482 229 aa16.68■□□□□ 0.26
CTNNA1-213ENST00000519113 RAD51DO75771 328 aa16.68■□□□□ 0.26
CTNNA1-213ENST00000519113 STAMBPO95630 424 aa16.68■□□□□ 0.26
CTNNA1-213ENST00000519113 SLC6A2P23975 617 aa16.68■□□□□ 0.26
CTNNA1-213ENST00000519113 SPOCK1Q08629 439 aa16.68■□□□□ 0.26
CTNNA1-213ENST00000519113 ZNF385BQ569K4 471 aa16.68■□□□□ 0.26
CTNNA1-213ENST00000519113 C6orf10Q5SRN2 563 aa16.68■□□□□ 0.26
CTNNA1-213ENST00000519113 DLEU7Q6UYE1 221 aa16.68■□□□□ 0.26
CTNNA1-213ENST00000519113 SLC15A3Q8IY34 581 aa16.68■□□□□ 0.26
CTNNA1-213ENST00000519113 RNF148Q8N7C7 305 aa16.68■□□□□ 0.26
CTNNA1-213ENST00000519113 OR7A2PQ8NGA2 310 aa16.68■□□□□ 0.26
CTNNA1-213ENST00000519113 GTF2H4Q92759 462 aa16.68■□□□□ 0.26
CTNNA1-213ENST00000519113 CDS1Q92903 461 aa16.68■□□□□ 0.26
CTNNA1-213ENST00000519113 PIGUQ9H490 435 aa16.68■□□□□ 0.26
CTNNA1-213ENST00000519113 ABCD2Q9UBJ2 740 aa16.68■□□□□ 0.26
CTNNA1-213ENST00000519113 CD300AQ9UGN4 299 aa16.68■□□□□ 0.26
CTNNA1-213ENST00000519113 SLC25A15Q9Y619 301 aa16.68■□□□□ 0.26
CTNNA1-213ENST00000519113 ANXA8L1Q5VT79 327 aa16.67■□□□□ 0.26
CTNNA1-213ENST00000519113 OR7E24Q6IFN5 339 aa16.67■□□□□ 0.26
CTNNA1-213ENST00000519113 C3orf33Q6P1S2 294 aa16.67■□□□□ 0.26
CTNNA1-213ENST00000519113 B3GLCTQ6Y288 498 aa16.67■□□□□ 0.26
CTNNA1-213ENST00000519113 IL17RELQ6ZVW7 336 aa16.67■□□□□ 0.26
CTNNA1-213ENST00000519113 VPS37AQ8NEZ2 397 aa16.67■□□□□ 0.26
CTNNA1-213ENST00000519113 TOR1AIP2Q8NFQ8 470 aa16.67■□□□□ 0.26
CTNNA1-213ENST00000519113 OR8J2Q8NGG1 315 aa16.67■□□□□ 0.26
CTNNA1-213ENST00000519113 OR5W2Q8NH69 310 aa16.67■□□□□ 0.26
CTNNA1-213ENST00000519113 OR5B2Q96R09 309 aa16.67■□□□□ 0.26
CTNNA1-213ENST00000519113 CGREF1Q99674 301 aa16.67■□□□□ 0.26
CTNNA1-213ENST00000519113 SH3GL1Q99961 368 aa16.67■□□□□ 0.26
CTNNA1-213ENST00000519113 FKRPQ9H9S5 495 aa16.67■□□□□ 0.26
CTNNA1-213ENST00000519113 ZCCHC3Q9NUD5 404 aaKnown RBP16.67■□□□□ 0.26
CTNNA1-213ENST00000519113 ATAD3AQ9NVI7 634 aa16.67■□□□□ 0.26
CTNNA1-213ENST00000519113 CMTM6Q9NX76 183 aa16.67■□□□□ 0.26
CTNNA1-213ENST00000519113 ATP6V1HQ9UI12 483 aa16.67■□□□□ 0.26
CTNNA1-213ENST00000519113 AP3M1Q9Y2T2 418 aa16.67■□□□□ 0.26
CTNNA1-213ENST00000519113 YLPM1P49750 1951 aaKnown RBP16.66■□□□□ 0.26
CTNNA1-213ENST00000519113 A0A096LPI6 279 aa16.66■□□□□ 0.26
CTNNA1-213ENST00000519113 SLC35F4A4IF30 521 aa16.66■□□□□ 0.26
CTNNA1-213ENST00000519113 M0R1B8 84 aa16.66■□□□□ 0.26
CTNNA1-213ENST00000519113 NDUFS8O00217 210 aa16.66■□□□□ 0.26
CTNNA1-213ENST00000519113 ETV2O00321 342 aaPredicted RBP16.66■□□□□ 0.26
CTNNA1-213ENST00000519113 HMGN2P05204 90 aaKnown RBP16.66■□□□□ 0.26
CTNNA1-213ENST00000519113 DDX5P17844 614 aaKnown RBP16.66■□□□□ 0.26
CTNNA1-213ENST00000519113 TCN1P20061 433 aaPredicted RBP16.66■□□□□ 0.26
CTNNA1-213ENST00000519113 APOBEC3AP31941 199 aaPredicted RBP16.66■□□□□ 0.26
CTNNA1-213ENST00000519113 PDLIM4P50479 330 aa16.66■□□□□ 0.26
CTNNA1-213ENST00000519113 RNF144AP50876 292 aaPredicted RBP16.66■□□□□ 0.26
CTNNA1-213ENST00000519113 ATP12AP54707 1039 aa16.66■□□□□ 0.26
CTNNA1-213ENST00000519113 CSNK2A1P68400 391 aaPredicted RBP16.66■□□□□ 0.26
CTNNA1-213ENST00000519113 LRRC74AQ0VAA2 488 aa16.66■□□□□ 0.26
CTNNA1-213ENST00000519113 TRAP1Q12931 704 aaKnown RBP16.66■□□□□ 0.26
CTNNA1-213ENST00000519113 CBFBQ13951 182 aa16.66■□□□□ 0.26
CTNNA1-213ENST00000519113 GGTLC2Q14390 218 aa16.66■□□□□ 0.26
CTNNA1-213ENST00000519113 LASP1Q14847 261 aaKnown RBP16.66■□□□□ 0.26
CTNNA1-213ENST00000519113 PDK3Q15120 406 aa16.66■□□□□ 0.26
CTNNA1-213ENST00000519113 QPRTQ15274 297 aa16.66■□□□□ 0.26
CTNNA1-213ENST00000519113 OR4F3Q6IEY1 312 aa16.66■□□□□ 0.26
CTNNA1-213ENST00000519113 NANOGP8Q6NSW7 305 aa16.66■□□□□ 0.26
CTNNA1-213ENST00000519113 TMCO5AQ8N6Q1 288 aa16.66■□□□□ 0.26
CTNNA1-213ENST00000519113 OR8J3Q8NGG0 315 aa16.66■□□□□ 0.26
CTNNA1-213ENST00000519113 APH1AQ96BI3 265 aa16.66■□□□□ 0.26
CTNNA1-213ENST00000519113 COQ8BQ96D53 544 aa16.66■□□□□ 0.26
CTNNA1-213ENST00000519113 MTERF3Q96E29 417 aa16.66■□□□□ 0.26
CTNNA1-213ENST00000519113 FAM120BQ96EK7 910 aaKnown RBP16.66■□□□□ 0.26
CTNNA1-213ENST00000519113 DUSP26Q9BV47 211 aa16.66■□□□□ 0.26
CTNNA1-213ENST00000519113 DCLRE1BQ9H816 532 aa16.66■□□□□ 0.26
CTNNA1-213ENST00000519113 NANOGQ9H9S0 305 aa16.66■□□□□ 0.26
CTNNA1-213ENST00000519113 SERINC1Q9NRX5 453 aa16.66■□□□□ 0.26
CTNNA1-213ENST00000519113 ASB6Q9NWX5 421 aa16.66■□□□□ 0.26
CTNNA1-213ENST00000519113 TAS2R16Q9NYV7 291 aa16.66■□□□□ 0.26
CTNNA1-213ENST00000519113 SLAMF8Q9P0V8 285 aa16.66■□□□□ 0.26
CTNNA1-213ENST00000519113 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.66■□□□□ 0.26
CTNNA1-213ENST00000519113 DTNAQ9Y4J8 743 aa16.66■□□□□ 0.26
CTNNA1-213ENST00000519113 ATP23Q9Y6H3 246 aa16.66■□□□□ 0.26
CTNNA1-213ENST00000519113 IGKV3D-15A0A087WSY6 115 aa16.65■□□□□ 0.26
CTNNA1-213ENST00000519113 NPIPA5A0A0B4J1W7 369 aa16.65■□□□□ 0.26
CTNNA1-213ENST00000519113 PRORSD1PA6NEY8 169 aa16.65■□□□□ 0.26
CTNNA1-213ENST00000519113 NPIPA7E9PJI5 369 aa16.65■□□□□ 0.26
CTNNA1-213ENST00000519113 NME4O00746 187 aa16.65■□□□□ 0.26
CTNNA1-213ENST00000519113 RFXANKO14593 260 aa16.65■□□□□ 0.26
CTNNA1-213ENST00000519113 EIF4E2O60573 245 aaKnown RBP16.65■□□□□ 0.26
CTNNA1-213ENST00000519113 DNAJA2O60884 412 aa16.65■□□□□ 0.26
CTNNA1-213ENST00000519113 FKBP6O75344 327 aa16.65■□□□□ 0.26
CTNNA1-213ENST00000519113 ANP32DO95626 131 aa16.65■□□□□ 0.26
CTNNA1-213ENST00000519113 IGHV3-9P01782 118 aa16.65■□□□□ 0.26
CTNNA1-213ENST00000519113 NPIPA8P0DM63 369 aa16.65■□□□□ 0.26
CTNNA1-213ENST00000519113 APEHP13798 732 aaKnown RBP16.65■□□□□ 0.26
CTNNA1-213ENST00000519113 HSD17B1P14061 328 aa16.65■□□□□ 0.26
CTNNA1-213ENST00000519113 PHC1P78364 1004 aa16.65■□□□□ 0.26
CTNNA1-213ENST00000519113 PDE7AQ13946 482 aa16.65■□□□□ 0.26
CTNNA1-213ENST00000519113 FLOT2Q14254 428 aa16.65■□□□□ 0.26
CTNNA1-213ENST00000519113 TRIM25Q14258 630 aaKnown RBP16.65■□□□□ 0.26
CTNNA1-213ENST00000519113 MLC1Q15049 377 aa16.65■□□□□ 0.26
CTNNA1-213ENST00000519113 NDUFAF6Q330K2 333 aa16.65■□□□□ 0.26
CTNNA1-213ENST00000519113 DCST2Q5T1A1 773 aa16.65■□□□□ 0.26
CTNNA1-213ENST00000519113 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms