RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 NUP214P35658 2090 aaPredicted RBP13.24□□□□□ -0.29
CSGALNACT1-204ENST00000517494 YLPM1P49750 1951 aaKnown RBP13.24□□□□□ -0.29
CSGALNACT1-204ENST00000517494 PRSS51A0A1B0GVH4 220 aa13.24□□□□□ -0.29
CSGALNACT1-204ENST00000517494 SH3PXD2BA1X283 911 aa13.24□□□□□ -0.29
CSGALNACT1-204ENST00000517494 PRAMEF27A3QJZ7 478 aa13.24□□□□□ -0.29
CSGALNACT1-204ENST00000517494 CFAP73A6NFT4 308 aa13.24□□□□□ -0.29
CSGALNACT1-204ENST00000517494 SNUPNO95149 360 aaKnown RBP13.24□□□□□ -0.29
CSGALNACT1-204ENST00000517494 C1QCP02747 245 aa13.24□□□□□ -0.29
CSGALNACT1-204ENST00000517494 GUSBP08236 651 aa13.24□□□□□ -0.29
CSGALNACT1-204ENST00000517494 CECR9P0C854 216 aa13.24□□□□□ -0.29
CSGALNACT1-204ENST00000517494 DAOP14920 347 aa13.24□□□□□ -0.29
CSGALNACT1-204ENST00000517494 IL7RP16871 459 aa13.24□□□□□ -0.29
CSGALNACT1-204ENST00000517494 IL2RGP31785 369 aa13.24□□□□□ -0.29
CSGALNACT1-204ENST00000517494 SELENOPP49908 381 aa13.24□□□□□ -0.29
CSGALNACT1-204ENST00000517494 IDH3GP51553 393 aaPredicted RBP13.24□□□□□ -0.29
CSGALNACT1-204ENST00000517494 CHN2P52757 468 aa13.24□□□□□ -0.29
CSGALNACT1-204ENST00000517494 NAAAQ02083 359 aa13.24□□□□□ -0.29
CSGALNACT1-204ENST00000517494 RUNX1T1Q06455 604 aa13.24□□□□□ -0.29
CSGALNACT1-204ENST00000517494 GNA13Q14344 377 aa13.24□□□□□ -0.29
CSGALNACT1-204ENST00000517494 SYPL1Q16563 259 aa13.24□□□□□ -0.29
CSGALNACT1-204ENST00000517494 MRPL2Q5T653 305 aaKnown RBP13.24□□□□□ -0.29
CSGALNACT1-204ENST00000517494 TMEM225Q6GV28 225 aa13.24□□□□□ -0.29
CSGALNACT1-204ENST00000517494 NIPAL3Q6P499 406 aa13.24□□□□□ -0.29
CSGALNACT1-204ENST00000517494 RINLQ6ZS11 566 aa13.24□□□□□ -0.29
CSGALNACT1-204ENST00000517494 CMIPQ8IY22 773 aa13.24□□□□□ -0.29
CSGALNACT1-204ENST00000517494 CADM2Q8N3J6 435 aa13.24□□□□□ -0.29
CSGALNACT1-204ENST00000517494 RFLNBQ8N5W9 214 aa13.24□□□□□ -0.29
CSGALNACT1-204ENST00000517494 OR8J2Q8NGG1 315 aa13.24□□□□□ -0.29
CSGALNACT1-204ENST00000517494 NEURL3Q96EH8 262 aa13.24□□□□□ -0.29
CSGALNACT1-204ENST00000517494 AKTIPQ9H8T0 292 aa13.24□□□□□ -0.29
CSGALNACT1-204ENST00000517494 SEC61A2Q9H9S3 476 aa13.24□□□□□ -0.29
CSGALNACT1-204ENST00000517494 DYNLRB1Q9NP97 96 aa13.24□□□□□ -0.29
CSGALNACT1-204ENST00000517494 ASIC5Q9NY37 505 aa13.24□□□□□ -0.29
CSGALNACT1-204ENST00000517494 TMEFF2Q9UIK5 374 aaPredicted RBP13.24□□□□□ -0.29
CSGALNACT1-204ENST00000517494 AGAP5A6NIR3 686 aa13.23□□□□□ -0.29
CSGALNACT1-204ENST00000517494 LIPT2A6NK58 231 aa13.23□□□□□ -0.29
CSGALNACT1-204ENST00000517494 AQP7P3A6NL99 342 aa13.23□□□□□ -0.29
CSGALNACT1-204ENST00000517494 hCG_2039718K7EN88 272 aa13.23□□□□□ -0.29
CSGALNACT1-204ENST00000517494 HMGN4O00479 90 aa13.23□□□□□ -0.29
CSGALNACT1-204ENST00000517494 STAMBPO95630 424 aa13.23□□□□□ -0.29
CSGALNACT1-204ENST00000517494 CHRM4P08173 479 aa13.23□□□□□ -0.29
CSGALNACT1-204ENST00000517494 CALCRP30988 508 aa13.23□□□□□ -0.29
CSGALNACT1-204ENST00000517494 PPOXP50336 477 aa13.23□□□□□ -0.29
CSGALNACT1-204ENST00000517494 NME5P56597 212 aa13.23□□□□□ -0.29
CSGALNACT1-204ENST00000517494 EPS8Q12929 822 aa13.23□□□□□ -0.29
CSGALNACT1-204ENST00000517494 BNIP2Q12982 314 aa13.23□□□□□ -0.29
CSGALNACT1-204ENST00000517494 CCNIQ14094 377 aa13.23□□□□□ -0.29
CSGALNACT1-204ENST00000517494 EFNB3Q15768 340 aa13.23□□□□□ -0.29
CSGALNACT1-204ENST00000517494 SPANXN4Q5MJ08 99 aa13.23□□□□□ -0.29
CSGALNACT1-204ENST00000517494 C1QTNF12Q5T7M4 302 aa13.23□□□□□ -0.29
CSGALNACT1-204ENST00000517494 ANKRD16Q6P6B7 361 aa13.23□□□□□ -0.29
CSGALNACT1-204ENST00000517494 C12orf54Q6X4T0 127 aa13.23□□□□□ -0.29
CSGALNACT1-204ENST00000517494 SPATA21Q7Z572 469 aa13.23□□□□□ -0.29
CSGALNACT1-204ENST00000517494 ZCCHC24Q8N2G6 241 aaKnown RBP13.23□□□□□ -0.29
CSGALNACT1-204ENST00000517494 SVOPLQ8N434 492 aa13.23□□□□□ -0.29
CSGALNACT1-204ENST00000517494 PNPT1Q8TCS8 783 aaKnown RBP13.23□□□□□ -0.29
CSGALNACT1-204ENST00000517494 SF3B5Q9BWJ5 86 aaKnown RBP13.23□□□□□ -0.29
CSGALNACT1-204ENST00000517494 PLK3Q9H4B4 646 aa13.23□□□□□ -0.29
CSGALNACT1-204ENST00000517494 OCEL1Q9H607 264 aa13.23□□□□□ -0.29
CSGALNACT1-204ENST00000517494 WDR91A4D1P6 747 aa13.22□□□□□ -0.29
CSGALNACT1-204ENST00000517494 PDE5AO76074 875 aa13.22□□□□□ -0.29
CSGALNACT1-204ENST00000517494 BPGMP07738 259 aa13.22□□□□□ -0.29
CSGALNACT1-204ENST00000517494 GKN3PP0CG01 181 aa13.22□□□□□ -0.29
CSGALNACT1-204ENST00000517494 NR2F1P10589 423 aa13.22□□□□□ -0.29
CSGALNACT1-204ENST00000517494 IFFO1Q0D2I5 559 aa13.22□□□□□ -0.29
CSGALNACT1-204ENST00000517494 NPRL3Q12980 569 aa13.22□□□□□ -0.29
CSGALNACT1-204ENST00000517494 FAM174BQ3ZCQ3 159 aa13.22□□□□□ -0.29
CSGALNACT1-204ENST00000517494 PRAMEF8Q5VWM4 474 aa13.22□□□□□ -0.29
CSGALNACT1-204ENST00000517494 PRAMEF7Q5VXH5 474 aa13.22□□□□□ -0.29
CSGALNACT1-204ENST00000517494 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.22□□□□□ -0.29
CSGALNACT1-204ENST00000517494 LINC01356Q8N9X3 169 aa13.22□□□□□ -0.29
CSGALNACT1-204ENST00000517494 PKNOX2Q96KN3 472 aa13.22□□□□□ -0.29
CSGALNACT1-204ENST00000517494 TRNT1Q96Q11 434 aaKnown RBP13.22□□□□□ -0.29
CSGALNACT1-204ENST00000517494 ADAM19Q9H013 955 aa13.22□□□□□ -0.29
CSGALNACT1-204ENST00000517494 SLC38A1Q9H2H9 487 aa13.22□□□□□ -0.29
CSGALNACT1-204ENST00000517494 RLIMQ9NVW2 624 aa13.22□□□□□ -0.29
CSGALNACT1-204ENST00000517494 HEATR1Q9H583 2144 aaKnown RBP13.21□□□□□ -0.29
CSGALNACT1-204ENST00000517494 VSTM5A8MXK1 200 aa13.21□□□□□ -0.29
CSGALNACT1-204ENST00000517494 ITM2AO43736 263 aa13.21□□□□□ -0.29
CSGALNACT1-204ENST00000517494 UPK3AO75631 287 aa13.21□□□□□ -0.29
CSGALNACT1-204ENST00000517494 DBIP07108 87 aaKnown RBP13.21□□□□□ -0.29
CSGALNACT1-204ENST00000517494 CELA3BP08861 270 aa13.21□□□□□ -0.29
CSGALNACT1-204ENST00000517494 IFNGR1P15260 489 aa13.21□□□□□ -0.29
CSGALNACT1-204ENST00000517494 NCF2P19878 526 aaPredicted RBP13.21□□□□□ -0.29
CSGALNACT1-204ENST00000517494 NPR2P20594 1047 aa13.21□□□□□ -0.29
CSGALNACT1-204ENST00000517494 S100A3P33764 101 aa13.21□□□□□ -0.29
CSGALNACT1-204ENST00000517494 THBS4P35443 961 aa13.21□□□□□ -0.29
CSGALNACT1-204ENST00000517494 CAPZA2P47755 286 aa13.21□□□□□ -0.29
CSGALNACT1-204ENST00000517494 ANXA11P50995 505 aaKnown RBP13.21□□□□□ -0.29
CSGALNACT1-204ENST00000517494 MAP2K6P52564 334 aa13.21□□□□□ -0.29
CSGALNACT1-204ENST00000517494 COPZ1P61923 177 aa13.21□□□□□ -0.29
CSGALNACT1-204ENST00000517494 CASP8Q14790 479 aa13.21□□□□□ -0.29
CSGALNACT1-204ENST00000517494 TRIP10Q15642 601 aa13.21□□□□□ -0.29
CSGALNACT1-204ENST00000517494 ADRM1Q16186 407 aa13.21□□□□□ -0.29
CSGALNACT1-204ENST00000517494 LRRC74BQ6ZQY2 392 aa13.21□□□□□ -0.29
CSGALNACT1-204ENST00000517494 CREB3L2Q70SY1 520 aa13.21□□□□□ -0.29
CSGALNACT1-204ENST00000517494 LINGO2Q7L985 606 aa13.21□□□□□ -0.29
CSGALNACT1-204ENST00000517494 NUDCD3Q8IVD9 361 aa13.21□□□□□ -0.29
CSGALNACT1-204ENST00000517494 ZNF781Q8N8C0 355 aa13.21□□□□□ -0.29
CSGALNACT1-204ENST00000517494 OR4F15Q8NGB8 312 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms