RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 POLDIP2Q9Y2S7 368 aa2.51□□□□□ -2.01
HERC4-215ENST00000515753 GMPPBQ9Y5P6 360 aa2.51□□□□□ -2.01
HERC4-215ENST00000515753 ITGB4P16144 1822 aa2.51□□□□□ -2.01
HERC4-215ENST00000515753 KIF20BQ96Q89 1820 aa2.51□□□□□ -2.01
HERC4-215ENST00000515753 FRMPD4Q14CM0 1322 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 LRP5LA4QPB2 252 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 BTBD17A6NE02 478 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.5□□□□□ -2.01
HERC4-215ENST00000515753 M0QX08 132 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 PES1O00541 588 aaKnown RBP2.5□□□□□ -2.01
HERC4-215ENST00000515753 PPIHO43447 177 aaKnown RBP2.5□□□□□ -2.01
HERC4-215ENST00000515753 PRKAB2O43741 272 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 SRPX2O60687 465 aaPredicted RBP2.5□□□□□ -2.01
HERC4-215ENST00000515753 TRIM3O75382 744 aaPredicted RBP2.5□□□□□ -2.01
HERC4-215ENST00000515753 LRATO95237 230 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 OTCP00480 354 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 JCHAINP01591 159 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 KRTAP1-4P0C5Y4 121 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 OR8G3PP0DMU2 310 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 XRCC1P18887 633 aaPredicted RBP2.5□□□□□ -2.01
HERC4-215ENST00000515753 MMP11P24347 488 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 ATP5A1P25705 553 aaKnown RBP2.5□□□□□ -2.01
HERC4-215ENST00000515753 OTX1P32242 354 aaPredicted RBP2.5□□□□□ -2.01
HERC4-215ENST00000515753 RPL13AP40429 203 aaKnown RBP2.5□□□□□ -2.01
HERC4-215ENST00000515753 GYG1P46976 350 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 RAB9AP51151 201 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 TPMTP51580 245 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 C21orf59P57076 290 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 RGS8P57771 180 aaPredicted RBP2.5□□□□□ -2.01
HERC4-215ENST00000515753 EIF3EP60228 445 aaKnown RBP2.5□□□□□ -2.01
HERC4-215ENST00000515753 OTUD4Q01804 1114 aaKnown RBP2.5□□□□□ -2.01
HERC4-215ENST00000515753 OGDHQ02218 1023 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 ZNF85Q03923 595 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 ZFP36L1Q07352 338 aaKnown RBP2.5□□□□□ -2.01
HERC4-215ENST00000515753 RGS1Q08116 209 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 C1orf61Q13536 156 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 ECSCRQ19T08 205 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 SLX4IPQ5VYV7 408 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 WDR25Q64LD2 544 aaPredicted RBP2.5□□□□□ -2.01
HERC4-215ENST00000515753 ACSM5Q6NUN0 579 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 FAHD2BQ6P2I3 314 aaPredicted RBP2.5□□□□□ -2.01
HERC4-215ENST00000515753 RNASEKQ6P5S7 137 aaKnown RBP2.5□□□□□ -2.01
HERC4-215ENST00000515753 UTS2BQ765I0 119 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 APTXQ7Z2E3 356 aaKnown RBP2.5□□□□□ -2.01
HERC4-215ENST00000515753 SLC25A42Q86VD7 318 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 CLEC4FQ8N1N0 589 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 ZNF321PQ8N8H1 164 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 BPIFCQ8NFQ6 507 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 OR52B6Q8NGF0 335 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 FAM81AQ8TBF8 368 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 SSC4DQ8WTU2 575 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 ST8SIA1Q92185 356 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 RAPGEF5Q92565 580 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 BADQ92934 168 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 SLC38A4Q969I6 547 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 ISG20Q96AZ6 181 aaKnown RBP2.5□□□□□ -2.01
HERC4-215ENST00000515753 C10orf35Q96D05 121 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 FAHD2AQ96GK7 314 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 TGS1Q96RS0 853 aaKnown RBP2.5□□□□□ -2.01
HERC4-215ENST00000515753 CCT8L2Q96SF2 557 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 NIPSNAP3BQ9BS92 247 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 ST6GALNAC5Q9BVH7 336 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 STRADBQ9C0K7 418 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 ILKAPQ9H0C8 392 aaPredicted RBP2.5□□□□□ -2.01
HERC4-215ENST00000515753 TDRD3Q9H7E2 651 aaKnown RBP2.5□□□□□ -2.01
HERC4-215ENST00000515753 NT5DC2Q9H857 520 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 ZNF160Q9HCG1 818 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 SLC17A5Q9NRA2 495 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 KLHL28Q9NXS3 571 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 RCOR3Q9P2K3 495 aaPredicted RBP2.5□□□□□ -2.01
HERC4-215ENST00000515753 PEF1Q9UBV8 284 aaKnown RBP2.5□□□□□ -2.01
HERC4-215ENST00000515753 SEC14L4Q9UDX3 406 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 PISDQ9UG56 409 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 ZNF221Q9UK13 617 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 IKZF2Q9UKS7 526 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 ABCG2Q9UNQ0 655 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 TIMM10BQ9Y5J6 103 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 ALG6Q9Y672 507 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 ADAMTSL1Q8N6G6 1762 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 SCN7AQ01118 1682 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 THSD7BQ9C0I4 1608 aa2.5□□□□□ -2.01
HERC4-215ENST00000515753 RALGAPA1Q6GYQ0 2036 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 A0A1W2PPE3 182 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 SMCO3A2RU48 225 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 ZNF840PA6NDX5 716 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 CCDC182A6NF36 153 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 OR6C65A6NJZ3 312 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 A8MU10 97 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 SHISA9B4DS77 424 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 C11orf98E9PRG8 122 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 G3V4G9 280 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 K7EQG2 157 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 PDHXO00330 501 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 ABCD4O14678 606 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 POLR2DO15514 142 aaKnown RBP2.49□□□□□ -2.01
HERC4-215ENST00000515753 EFNA2O43921 213 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 DNAJB6O75190 326 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 NUDT14O95848 222 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 CST1P01037 141 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 IGKV5-2P06315 115 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms