RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	PKP2	Q99959	881 aa		13	□□□□□ -0.33
MATR3-238	ENST00000512107	TTYH2	Q9BSA4	534 aa		13	□□□□□ -0.33
MATR3-238	ENST00000512107	ARMC1	Q9NVT9	282 aa		13	□□□□□ -0.33
MATR3-238	ENST00000512107	KLHL13	Q9P2N7	655 aa		13	□□□□□ -0.33
MATR3-238	ENST00000512107	PRDM4	Q9UKN5	801 aa		13	□□□□□ -0.33
MATR3-238	ENST00000512107	CLEC4A	Q9UMR7	237 aa		13	□□□□□ -0.33
MATR3-238	ENST00000512107	MEMO1	Q9Y316	297 aa		13	□□□□□ -0.33
MATR3-238	ENST00000512107	HDGFL3	Q9Y3E1	203 aa		13	□□□□□ -0.33
MATR3-238	ENST00000512107	FAM32A	Q9Y421	112 aa	Known RBP	13	□□□□□ -0.33
MATR3-238	ENST00000512107	AHRR	A9YTQ3	701 aa		12.99	□□□□□ -0.33
MATR3-238	ENST00000512107	SULT2B1	O00204	365 aa		12.99	□□□□□ -0.33
MATR3-238	ENST00000512107	PRRG2	O14669	202 aa		12.99	□□□□□ -0.33
MATR3-238	ENST00000512107	KLF4	O43474	513 aa		12.99	□□□□□ -0.33
MATR3-238	ENST00000512107	GADD45G	O95257	159 aa		12.99	□□□□□ -0.33
MATR3-238	ENST00000512107	CST1	P01037	141 aa		12.99	□□□□□ -0.33
MATR3-238	ENST00000512107	GRPR	P30550	384 aa		12.99	□□□□□ -0.33
MATR3-238	ENST00000512107	GPR4	P46093	362 aa		12.99	□□□□□ -0.33
MATR3-238	ENST00000512107	AGFG1	P52594	562 aa	Known RBP	12.99	□□□□□ -0.33
MATR3-238	ENST00000512107	RAC3	P60763	192 aa		12.99	□□□□□ -0.33
MATR3-238	ENST00000512107	PRKCD	Q05655	676 aa		12.99	□□□□□ -0.33
MATR3-238	ENST00000512107	ESPL1	Q14674	2120 aa		12.99	□□□□□ -0.33
MATR3-238	ENST00000512107	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	12.99	□□□□□ -0.33	3e-6	■■■■□ 23.9
MATR3-238	ENST00000512107	NSUN5P2	Q63ZY6	315 aa		12.99	□□□□□ -0.33
MATR3-238	ENST00000512107	NHLRC1	Q6VVB1	395 aa		12.99	□□□□□ -0.33
MATR3-238	ENST00000512107	MBOAT2	Q6ZWT7	520 aa		12.99	□□□□□ -0.33
MATR3-238	ENST00000512107	ZER1	Q7Z7L7	766 aa		12.99	□□□□□ -0.33
MATR3-238	ENST00000512107	CYP4Z1	Q86W10	505 aa		12.99	□□□□□ -0.33
MATR3-238	ENST00000512107	LIX1L	Q8IVB5	337 aa		12.99	□□□□□ -0.33
MATR3-238	ENST00000512107	OR4K5	Q8NGD3	323 aa		12.99	□□□□□ -0.33
MATR3-238	ENST00000512107	ABHD3	Q8WU67	409 aa		12.99	□□□□□ -0.33
MATR3-238	ENST00000512107	ACOT11	Q8WXI4	607 aa	Predicted RBP	12.99	□□□□□ -0.33
MATR3-238	ENST00000512107	ZNF775	Q96BV0	537 aa	Predicted RBP	12.99	□□□□□ -0.33
MATR3-238	ENST00000512107	DTNBP1	Q96EV8	351 aa		12.99	□□□□□ -0.33
MATR3-238	ENST00000512107	ALPK1	Q96QP1	1244 aa		12.99	□□□□□ -0.33
MATR3-238	ENST00000512107	ENKD1	Q9H0I2	346 aa		12.99	□□□□□ -0.33
MATR3-238	ENST00000512107	S100A14	Q9HCY8	104 aa		12.99	□□□□□ -0.33
MATR3-238	ENST00000512107	SELENON	Q9NZV5	590 aa		12.99	□□□□□ -0.33
MATR3-238	ENST00000512107	AP4S1	Q9Y587	144 aa		12.99	□□□□□ -0.33
MATR3-238	ENST00000512107	NCOA6	Q14686	2063 aa	Predicted RBP	12.98	□□□□□ -0.33
MATR3-238	ENST00000512107	CYSRT1	A8MQ03	144 aa		12.98	□□□□□ -0.33
MATR3-238	ENST00000512107	MS4A18	H0YCH9	400 aa		12.98	□□□□□ -0.33
MATR3-238	ENST00000512107		M0R082	166 aa		12.98	□□□□□ -0.33
MATR3-238	ENST00000512107	TNFRSF11B	O00300	401 aa		12.98	□□□□□ -0.33
MATR3-238	ENST00000512107	CLOCK	O15516	846 aa		12.98	□□□□□ -0.33
MATR3-238	ENST00000512107	WDR1	O75083	606 aa		12.98	□□□□□ -0.33
MATR3-238	ENST00000512107	OR7A10	O76100	309 aa		12.98	□□□□□ -0.33
MATR3-238	ENST00000512107	AHSA1	O95433	338 aa		12.98	□□□□□ -0.33
MATR3-238	ENST00000512107	IFI30	P13284	250 aa		12.98	□□□□□ -0.33
MATR3-238	ENST00000512107	ITGA2	P17301	1181 aa		12.98	□□□□□ -0.33
MATR3-238	ENST00000512107	PRKACG	P22612	351 aa		12.98	□□□□□ -0.33
MATR3-238	ENST00000512107	GCK	P35557	465 aa		12.98	□□□□□ -0.33
MATR3-238	ENST00000512107	RBM34	P42696	430 aa	Known RBP	12.98	□□□□□ -0.33
MATR3-238	ENST00000512107	CLK1	P49759	484 aa	Known RBP	12.98	□□□□□ -0.33
MATR3-238	ENST00000512107	CTBP2	P56545	445 aa		12.98	□□□□□ -0.33
MATR3-238	ENST00000512107	FXYD6P3	P58550	94 aa		12.98	□□□□□ -0.33
MATR3-238	ENST00000512107	ELF3	P78545	371 aa	Predicted RBP	12.98	□□□□□ -0.33
MATR3-238	ENST00000512107	RBPJ	Q06330	500 aa		12.98	□□□□□ -0.33
MATR3-238	ENST00000512107	PMPCA	Q10713	525 aa		12.98	□□□□□ -0.33
MATR3-238	ENST00000512107	GUSBP1	Q15486	140 aa		12.98	□□□□□ -0.33
MATR3-238	ENST00000512107	ATP6AP1	Q15904	470 aa		12.98	□□□□□ -0.33
MATR3-238	ENST00000512107	MS4A18	Q3C1V0	323 aa		12.98	□□□□□ -0.33
MATR3-238	ENST00000512107	ABLIM2	Q6H8Q1	611 aa		12.98	□□□□□ -0.33
MATR3-238	ENST00000512107	PGBD2	Q6P3X8	592 aa		12.98	□□□□□ -0.33
MATR3-238	ENST00000512107	ZNF730	Q6ZMV8	503 aa		12.98	□□□□□ -0.33
MATR3-238	ENST00000512107	FJX1	Q86VR8	437 aa		12.98	□□□□□ -0.33
MATR3-238	ENST00000512107	PM20D2	Q8IYS1	436 aa		12.98	□□□□□ -0.33
MATR3-238	ENST00000512107	MFSD8	Q8NHS3	518 aa		12.98	□□□□□ -0.33
MATR3-238	ENST00000512107	ZNF417	Q8TAU3	575 aa		12.98	□□□□□ -0.33
MATR3-238	ENST00000512107	FAM46A	Q96IP4	442 aa	Known RBP	12.98	□□□□□ -0.33
MATR3-238	ENST00000512107	ZNF347	Q96SE7	839 aa		12.98	□□□□□ -0.33
MATR3-238	ENST00000512107	ZNF587	Q96SQ5	575 aa	Predicted RBP	12.98	□□□□□ -0.33
MATR3-238	ENST00000512107	SEMA6A	Q9H2E6	1030 aa		12.98	□□□□□ -0.33
MATR3-238	ENST00000512107	TP63	Q9H3D4	680 aa	Predicted RBP	12.98	□□□□□ -0.33
MATR3-238	ENST00000512107	B3GAT1	Q9P2W7	334 aa		12.98	□□□□□ -0.33
MATR3-238	ENST00000512107	TRAPPC4	Q9Y296	219 aa		12.98	□□□□□ -0.33
MATR3-238	ENST00000512107	SPIN1	Q9Y657	262 aa	Predicted RBP	12.98	□□□□□ -0.33
MATR3-238	ENST00000512107	MYO7B	Q6PIF6	2116 aa		12.98	□□□□□ -0.33
MATR3-238	ENST00000512107		A0A0G2JNJ9	132 aa		12.97	□□□□□ -0.33
MATR3-238	ENST00000512107	MBD3L4	A6NDZ8	208 aa	Predicted RBP	12.97	□□□□□ -0.33
MATR3-238	ENST00000512107	MBD3L3	A6NE82	208 aa	Predicted RBP	12.97	□□□□□ -0.33
MATR3-238	ENST00000512107	MBD3L5	A6NJ08	208 aa	Predicted RBP	12.97	□□□□□ -0.33
MATR3-238	ENST00000512107	CD8B2	A6NJW9	211 aa		12.97	□□□□□ -0.33
MATR3-238	ENST00000512107	SLC22A20	A6NK97	555 aa		12.97	□□□□□ -0.33
MATR3-238	ENST00000512107	GJE1	A6NN92	205 aa		12.97	□□□□□ -0.33
MATR3-238	ENST00000512107	ZNF716	A6NP11	495 aa		12.97	□□□□□ -0.33
MATR3-238	ENST00000512107	CCL21	O00585	134 aa		12.97	□□□□□ -0.33
MATR3-238	ENST00000512107	LRRTM2	O43300	516 aa		12.97	□□□□□ -0.33
MATR3-238	ENST00000512107	IGFBP1	P08833	259 aa	Predicted RBP	12.97	□□□□□ -0.33
MATR3-238	ENST00000512107	ASAH2B	P0C7U1	165 aa		12.97	□□□□□ -0.33
MATR3-238	ENST00000512107	HLA-DOB	P13765	273 aa		12.97	□□□□□ -0.33
MATR3-238	ENST00000512107	CEACAM8	P31997	349 aa	Predicted RBP	12.97	□□□□□ -0.33
MATR3-238	ENST00000512107	SGCB	Q16585	318 aa		12.97	□□□□□ -0.33
MATR3-238	ENST00000512107	PPP4R4	Q6NUP7	873 aa		12.97	□□□□□ -0.33
MATR3-238	ENST00000512107	ZNF771	Q7L3S4	317 aa	Predicted RBP	12.97	□□□□□ -0.33
MATR3-238	ENST00000512107	FCRLA	Q7L513	359 aa		12.97	□□□□□ -0.33
MATR3-238	ENST00000512107	EPHX4	Q8IUS5	362 aa		12.97	□□□□□ -0.33
MATR3-238	ENST00000512107	CCDC71	Q8IV32	467 aa	Predicted RBP	12.97	□□□□□ -0.33
MATR3-238	ENST00000512107	GCNT2	Q8N0V5	402 aa		12.97	□□□□□ -0.33
MATR3-238	ENST00000512107	ZIC4	Q8N9L1	334 aa		12.97	□□□□□ -0.33
MATR3-238	ENST00000512107	OR13C2	Q8NGS9	318 aa		12.97	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms