RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 LCP2Q13094 533 aa9.98□□□□□ -0.81
RNF4-216ENST00000511859 SKP2Q13309 424 aa9.98□□□□□ -0.81
RNF4-216ENST00000511859 SLC17A1Q14916 467 aa9.98□□□□□ -0.81
RNF4-216ENST00000511859 TBRG1Q3YBR2 411 aa9.98□□□□□ -0.81
RNF4-216ENST00000511859 HSP90B2PQ58FF3 399 aa9.98□□□□□ -0.81
RNF4-216ENST00000511859 ELFN2Q5R3F8 820 aa9.98□□□□□ -0.81
RNF4-216ENST00000511859 HHATQ5VTY9 493 aa9.98□□□□□ -0.81
RNF4-216ENST00000511859 REP15Q6BDI9 236 aa9.98□□□□□ -0.81
RNF4-216ENST00000511859 ANKRD26P1Q6NSI1 321 aa9.98□□□□□ -0.81
RNF4-216ENST00000511859 ACSM5Q6NUN0 579 aa9.98□□□□□ -0.81
RNF4-216ENST00000511859 RBMS3Q6XE24 437 aaKnown RBP9.98□□□□□ -0.81
RNF4-216ENST00000511859 SLC22A9Q8IVM8 553 aa9.98□□□□□ -0.81
RNF4-216ENST00000511859 SYT14Q8NB59 555 aa9.98□□□□□ -0.81
RNF4-216ENST00000511859 OR4M2Q8NGB6 313 aa9.98□□□□□ -0.81
RNF4-216ENST00000511859 MAGEE2Q8TD90 523 aaPredicted RBP9.98□□□□□ -0.81
RNF4-216ENST00000511859 RDH5Q92781 318 aa9.98□□□□□ -0.81
RNF4-216ENST00000511859 TMEM45BQ96B21 275 aa9.98□□□□□ -0.81
RNF4-216ENST00000511859 PPCDCQ96CD2 204 aa9.98□□□□□ -0.81
RNF4-216ENST00000511859 KCNA7Q96RP8 456 aa9.98□□□□□ -0.81
RNF4-216ENST00000511859 CCDC106Q9BWC9 280 aa9.98□□□□□ -0.81
RNF4-216ENST00000511859 ACTRT3Q9BYD9 372 aa9.98□□□□□ -0.81
RNF4-216ENST00000511859 REEP4Q9H6H4 257 aa9.98□□□□□ -0.81
RNF4-216ENST00000511859 NARFLQ9H6Q4 476 aa9.98□□□□□ -0.81
RNF4-216ENST00000511859 ZCCHC3Q9NUD5 404 aaKnown RBP9.98□□□□□ -0.81
RNF4-216ENST00000511859 NKIRAS1Q9NYS0 192 aa9.98□□□□□ -0.81
RNF4-216ENST00000511859 TMEM181Q9P2C4 612 aa9.98□□□□□ -0.81
RNF4-216ENST00000511859 ARHGAP32A7KAX9 2087 aa9.97□□□□□ -0.81
RNF4-216ENST00000511859 NPIPB8E9PQR5 432 aa9.97□□□□□ -0.81
RNF4-216ENST00000511859 TM9SF1O15321 606 aa9.97□□□□□ -0.81
RNF4-216ENST00000511859 ATP8B1O43520 1251 aa9.97□□□□□ -0.81
RNF4-216ENST00000511859 SEC22BO75396 215 aa9.97□□□□□ -0.81
RNF4-216ENST00000511859 CYP7B1O75881 506 aa9.97□□□□□ -0.81
RNF4-216ENST00000511859 IGKV3-15P01624 115 aa9.97□□□□□ -0.81
RNF4-216ENST00000511859 KRT16P08779 473 aa9.97□□□□□ -0.81
RNF4-216ENST00000511859 NEFHP12036 1026 aa9.97□□□□□ -0.81
RNF4-216ENST00000511859 PRTN3P24158 256 aa9.97□□□□□ -0.81
RNF4-216ENST00000511859 COL8A2P25067 703 aa9.97□□□□□ -0.81
RNF4-216ENST00000511859 ETV4P43268 484 aa9.97□□□□□ -0.81
RNF4-216ENST00000511859 PRKAA2P54646 552 aa9.97□□□□□ -0.81
RNF4-216ENST00000511859 WDR4P57081 412 aaKnown RBP9.97□□□□□ -0.81
RNF4-216ENST00000511859 KIAA0040Q15053 153 aa9.97□□□□□ -0.81
RNF4-216ENST00000511859 ZNF385BQ569K4 471 aa9.97□□□□□ -0.81
RNF4-216ENST00000511859 PDZK1Q5T2W1 519 aa9.97□□□□□ -0.81
RNF4-216ENST00000511859 CARM1Q86X55 608 aa9.97□□□□□ -0.81
RNF4-216ENST00000511859 NUDCD3Q8IVD9 361 aa9.97□□□□□ -0.81
RNF4-216ENST00000511859 CDK20Q8IZL9 346 aa9.97□□□□□ -0.81
RNF4-216ENST00000511859 IL17RDQ8NFM7 739 aa9.97□□□□□ -0.81
RNF4-216ENST00000511859 OR1K1Q8NGR3 316 aa9.97□□□□□ -0.81
RNF4-216ENST00000511859 BCL2L2Q92843 193 aaPredicted RBP9.97□□□□□ -0.81
RNF4-216ENST00000511859 TMPRSS13Q9BYE2 586 aa9.97□□□□□ -0.81
RNF4-216ENST00000511859 NMUR2Q9GZQ4 415 aa9.97□□□□□ -0.81
RNF4-216ENST00000511859 TPK1Q9H3S4 243 aa9.97□□□□□ -0.81
RNF4-216ENST00000511859 PIF1Q9H611 641 aa9.97□□□□□ -0.81
RNF4-216ENST00000511859 ZMAT3Q9HA38 289 aaKnown RBP9.97□□□□□ -0.81
RNF4-216ENST00000511859 CTPS2Q9NRF8 586 aa9.97□□□□□ -0.81
RNF4-216ENST00000511859 OXSMQ9NWU1 459 aa9.97□□□□□ -0.81
RNF4-216ENST00000511859 MID2Q9UJV3 735 aa9.97□□□□□ -0.81
RNF4-216ENST00000511859 FAF1Q9UNN5 650 aaPredicted RBP9.97□□□□□ -0.81
RNF4-216ENST00000511859 CMAHPQ9Y471 501 aa9.97□□□□□ -0.81
RNF4-216ENST00000511859 PPIAL4AQ9Y536 164 aa9.97□□□□□ -0.81
RNF4-216ENST00000511859 WNT9BO14905 357 aa9.96□□□□□ -0.82
RNF4-216ENST00000511859 PIP5K1BO14986 540 aa9.96□□□□□ -0.82
RNF4-216ENST00000511859 SYNGR3O43761 229 aa9.96□□□□□ -0.82
RNF4-216ENST00000511859 TRIM13O60858 407 aa9.96□□□□□ -0.82
RNF4-216ENST00000511859 KRT33AO76009 404 aa9.96□□□□□ -0.82
RNF4-216ENST00000511859 CSTAP01040 98 aa9.96□□□□□ -0.82
RNF4-216ENST00000511859 BPGMP07738 259 aa9.96□□□□□ -0.82
RNF4-216ENST00000511859 BGNP21810 368 aa9.96□□□□□ -0.82
RNF4-216ENST00000511859 GATA3P23771 443 aa9.96□□□□□ -0.82
RNF4-216ENST00000511859 ZFP36P26651 326 aaKnown RBP9.96□□□□□ -0.82
RNF4-216ENST00000511859 ASMTP46597 345 aa9.96□□□□□ -0.82
RNF4-216ENST00000511859 MRPS11P82912 194 aaKnown RBP9.96□□□□□ -0.82
RNF4-216ENST00000511859 PDE7AQ13946 482 aa9.96□□□□□ -0.82
RNF4-216ENST00000511859 ZNF141Q15928 474 aa9.96□□□□□ -0.82
RNF4-216ENST00000511859 ZNF311Q5JNZ3 666 aa9.96□□□□□ -0.82
RNF4-216ENST00000511859 CFAP157Q5JU67 520 aa9.96□□□□□ -0.82
RNF4-216ENST00000511859 LIPMQ5VYY2 423 aa9.96□□□□□ -0.82
RNF4-216ENST00000511859 AAED1Q7RTV5 226 aa9.96□□□□□ -0.82
RNF4-216ENST00000511859 GRINAQ7Z429 371 aa9.96□□□□□ -0.82
RNF4-216ENST00000511859 ADGRG3Q86Y34 549 aa9.96□□□□□ -0.82
RNF4-216ENST00000511859 ZNF563Q8TA94 476 aa9.96□□□□□ -0.82
RNF4-216ENST00000511859 PMM1Q92871 262 aa9.96□□□□□ -0.82
RNF4-216ENST00000511859 CCDC126Q96EE4 140 aa9.96□□□□□ -0.82
RNF4-216ENST00000511859 L3HYPDHQ96EM0 354 aa9.96□□□□□ -0.82
RNF4-216ENST00000511859 AURKBQ96GD4 344 aaPredicted RBP9.96□□□□□ -0.82
RNF4-216ENST00000511859 SDF2Q99470 211 aa9.96□□□□□ -0.82
RNF4-216ENST00000511859 SF3B5Q9BWJ5 86 aaKnown RBP9.96□□□□□ -0.82
RNF4-216ENST00000511859 GATA5Q9BWX5 397 aaPredicted RBP9.96□□□□□ -0.82
RNF4-216ENST00000511859 GSTO2Q9H4Y5 243 aa9.96□□□□□ -0.82
RNF4-216ENST00000511859 MID1IP1Q9NPA3 183 aa9.96□□□□□ -0.82
RNF4-216ENST00000511859 SIRT3Q9NTG7 399 aaPredicted RBP9.96□□□□□ -0.82
RNF4-216ENST00000511859 REV1Q9UBZ9 1251 aa9.96□□□□□ -0.82
RNF4-216ENST00000511859 KCNE3Q9Y6H6 103 aa9.96□□□□□ -0.82
RNF4-216ENST00000511859 OR6C65A6NJZ3 312 aa9.95□□□□□ -0.82
RNF4-216ENST00000511859 ZNF587BE7ETH6 402 aa9.95□□□□□ -0.82
RNF4-216ENST00000511859 M0R233 179 aa9.95□□□□□ -0.82
RNF4-216ENST00000511859 PPIHO43447 177 aaKnown RBP9.95□□□□□ -0.82
RNF4-216ENST00000511859 PRSS23O95084 383 aa9.95□□□□□ -0.82
RNF4-216ENST00000511859 MPZL1O95297 269 aa9.95□□□□□ -0.82
RNF4-216ENST00000511859 GSNP06396 782 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms