RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 PRDM4Q9UKN5 801 aa12.39□□□□□ -0.43
DDX41-212ENST00000511040 ARL2BPQ9Y2Y0 163 aa12.39□□□□□ -0.43
DDX41-212ENST00000511040 NOSIPQ9Y314 301 aaKnown RBP12.39□□□□□ -0.43
DDX41-212ENST00000511040 ANKHD1Q8IWZ3 2542 aaKnown RBP12.39□□□□□ -0.43
DDX41-212ENST00000511040 A0A0B4J2E0 115 aa12.38□□□□□ -0.43
DDX41-212ENST00000511040 A0A1B0GX12 115 aa12.38□□□□□ -0.43
DDX41-212ENST00000511040 ELOVL7A1L3X0 281 aa12.38□□□□□ -0.43
DDX41-212ENST00000511040 NME4O00746 187 aa12.38□□□□□ -0.43
DDX41-212ENST00000511040 SHOX2O60902 331 aaPredicted RBP12.38□□□□□ -0.43
DDX41-212ENST00000511040 C8BP07358 591 aa12.38□□□□□ -0.43
DDX41-212ENST00000511040 PNMTP11086 282 aa12.38□□□□□ -0.43
DDX41-212ENST00000511040 PCYT1AP49585 367 aa12.38□□□□□ -0.43
DDX41-212ENST00000511040 SLC16A1P53985 500 aa12.38□□□□□ -0.43
DDX41-212ENST00000511040 CYBRD1Q53TN4 286 aa12.38□□□□□ -0.43
DDX41-212ENST00000511040 ENTPD8Q5MY95 495 aa12.38□□□□□ -0.43
DDX41-212ENST00000511040 ARPINQ7Z6K5 226 aa12.38□□□□□ -0.43
DDX41-212ENST00000511040 GPAT4Q86UL3 456 aa12.38□□□□□ -0.43
DDX41-212ENST00000511040 TSPYL5Q86VY4 417 aaPredicted RBP12.38□□□□□ -0.43
DDX41-212ENST00000511040 GABRG1Q8N1C3 465 aa12.38□□□□□ -0.43
DDX41-212ENST00000511040 UBE2J2Q8N2K1 259 aa12.38□□□□□ -0.43
DDX41-212ENST00000511040 PROX1Q92786 737 aa12.38□□□□□ -0.43
DDX41-212ENST00000511040 TAAR8Q969N4 342 aa12.38□□□□□ -0.43
DDX41-212ENST00000511040 SLC47A1Q96FL8 570 aa12.38□□□□□ -0.43
DDX41-212ENST00000511040 ACTR6Q9GZN1 396 aa12.38□□□□□ -0.43
DDX41-212ENST00000511040 C12orf10Q9HB07 376 aa12.38□□□□□ -0.43
DDX41-212ENST00000511040 SEC14L4Q9UDX3 406 aa12.38□□□□□ -0.43
DDX41-212ENST00000511040 SH3GLB1Q9Y371 365 aa12.38□□□□□ -0.43
DDX41-212ENST00000511040 FAM221AA4D161 298 aa12.37□□□□□ -0.43
DDX41-212ENST00000511040 AQP7P3A6NL99 342 aa12.37□□□□□ -0.43
DDX41-212ENST00000511040 FTCDNL1E5RQL4 147 aa12.37□□□□□ -0.43
DDX41-212ENST00000511040 SIAH2O43255 324 aa12.37□□□□□ -0.43
DDX41-212ENST00000511040 THBDP07204 575 aa12.37□□□□□ -0.43
DDX41-212ENST00000511040 IL32P24001 234 aa12.37□□□□□ -0.43
DDX41-212ENST00000511040 PRDX6P30041 224 aa12.37□□□□□ -0.43
DDX41-212ENST00000511040 PSME3P61289 254 aa12.37□□□□□ -0.43
DDX41-212ENST00000511040 FOXD4Q12950 439 aaPredicted RBP12.37□□□□□ -0.43
DDX41-212ENST00000511040 VEZF1Q14119 521 aa12.37□□□□□ -0.43
DDX41-212ENST00000511040 SLC17A1Q14916 467 aa12.37□□□□□ -0.43
DDX41-212ENST00000511040 FAM91A1Q658Y4 838 aa12.37□□□□□ -0.43
DDX41-212ENST00000511040 TMEM225Q6GV28 225 aa12.37□□□□□ -0.43
DDX41-212ENST00000511040 C8orf82Q6P1X6 216 aaPredicted RBP12.37□□□□□ -0.43
DDX41-212ENST00000511040 CASP12Q6UXS9 341 aa12.37□□□□□ -0.43
DDX41-212ENST00000511040 HACD2Q6Y1H2 254 aa12.37□□□□□ -0.43
DDX41-212ENST00000511040 CARM1Q86X55 608 aa12.37□□□□□ -0.43
DDX41-212ENST00000511040 CDC20BQ86Y33 519 aa12.37□□□□□ -0.43
DDX41-212ENST00000511040 WFDC8Q8IUA0 241 aa12.37□□□□□ -0.43
DDX41-212ENST00000511040 KDM8Q8N371 416 aa12.37□□□□□ -0.43
DDX41-212ENST00000511040 OR9K2Q8NGE7 335 aa12.37□□□□□ -0.43
DDX41-212ENST00000511040 MFSD8Q8NHS3 518 aa12.37□□□□□ -0.43
DDX41-212ENST00000511040 SLC38A4Q969I6 547 aa12.37□□□□□ -0.43
DDX41-212ENST00000511040 APH1AQ96BI3 265 aa12.37□□□□□ -0.43
DDX41-212ENST00000511040 S100PBPQ96BU1 408 aa12.37□□□□□ -0.43
DDX41-212ENST00000511040 TPD52L3Q96J77 140 aa12.37□□□□□ -0.43
DDX41-212ENST00000511040 CCT8L2Q96SF2 557 aa12.37□□□□□ -0.43
DDX41-212ENST00000511040 HOPXQ9BPY8 73 aaPredicted RBP12.37□□□□□ -0.43
DDX41-212ENST00000511040 LIME1Q9H400 295 aa12.37□□□□□ -0.43
DDX41-212ENST00000511040 EVA1AQ9H8M9 152 aa12.37□□□□□ -0.43
DDX41-212ENST00000511040 FANCFQ9NPI8 374 aa12.37□□□□□ -0.43
DDX41-212ENST00000511040 FLVCR1Q9Y5Y0 555 aa12.37□□□□□ -0.43
DDX41-212ENST00000511040 TEX15Q9BXT5 2789 aa12.37□□□□□ -0.43
DDX41-212ENST00000511040 TRAV36DV7A0A075B6V5 113 aa12.36□□□□□ -0.43
DDX41-212ENST00000511040 A0A087WUJ7 227 aa12.36□□□□□ -0.43
DDX41-212ENST00000511040 GPR171O14626 319 aa12.36□□□□□ -0.43
DDX41-212ENST00000511040 GSTA4O15217 222 aa12.36□□□□□ -0.43
DDX41-212ENST00000511040 FMO6PO60774 539 aa12.36□□□□□ -0.43
DDX41-212ENST00000511040 MRPL33O75394 65 aaKnown RBP12.36□□□□□ -0.43
DDX41-212ENST00000511040 LYZL6O75951 148 aa12.36□□□□□ -0.43
DDX41-212ENST00000511040 LYPD3O95274 346 aa12.36□□□□□ -0.43
DDX41-212ENST00000511040 HRGP04196 525 aa12.36□□□□□ -0.43
DDX41-212ENST00000511040 THY1P04216 161 aa12.36□□□□□ -0.43
DDX41-212ENST00000511040 PSMB1P20618 241 aaKnown RBP12.36□□□□□ -0.43
DDX41-212ENST00000511040 IGHV1-2P23083 117 aa12.36□□□□□ -0.43
DDX41-212ENST00000511040 GTF2E2P29084 291 aaKnown RBP12.36□□□□□ -0.43
DDX41-212ENST00000511040 GRPRP30550 384 aa12.36□□□□□ -0.43
DDX41-212ENST00000511040 KDELR2P33947 212 aa12.36□□□□□ -0.43
DDX41-212ENST00000511040 OR1E2P47887 323 aa12.36□□□□□ -0.43
DDX41-212ENST00000511040 GSK3BP49841 420 aa12.36□□□□□ -0.43
DDX41-212ENST00000511040 P2RY4P51582 365 aa12.36□□□□□ -0.43
DDX41-212ENST00000511040 SFRP5Q5T4F7 317 aa12.36□□□□□ -0.43
DDX41-212ENST00000511040 ZNF613Q6PF04 617 aa12.36□□□□□ -0.43
DDX41-212ENST00000511040 WDR88Q6ZMY6 472 aa12.36□□□□□ -0.43
DDX41-212ENST00000511040 DEF8Q6ZN54 512 aa12.36□□□□□ -0.43
DDX41-212ENST00000511040 CDH24Q86UP0 819 aa12.36□□□□□ -0.43
DDX41-212ENST00000511040 C10orf53Q8N6V4 93 aa12.36□□□□□ -0.43
DDX41-212ENST00000511040 ZIC4Q8N9L1 334 aa12.36□□□□□ -0.43
DDX41-212ENST00000511040 RASSF5Q8WWW0 418 aa12.36□□□□□ -0.43
DDX41-212ENST00000511040 KISS1RQ969F8 398 aaPredicted RBP12.36□□□□□ -0.43
DDX41-212ENST00000511040 PIK3IP1Q96FE7 263 aa12.36□□□□□ -0.43
DDX41-212ENST00000511040 ZNF385AQ96PM9 386 aaKnown RBP12.36□□□□□ -0.43
DDX41-212ENST00000511040 LRRC37BQ96QE4 947 aa12.36□□□□□ -0.43
DDX41-212ENST00000511040 ARL8BQ9NVJ2 186 aa12.36□□□□□ -0.43
DDX41-212ENST00000511040 ZNF226Q9NYT6 803 aa12.36□□□□□ -0.43
DDX41-212ENST00000511040 ITGB1BP2Q9UKP3 347 aa12.36□□□□□ -0.43
DDX41-212ENST00000511040 BAG5Q9UL15 447 aa12.36□□□□□ -0.43
DDX41-212ENST00000511040 SLC9A8Q9Y2E8 581 aa12.36□□□□□ -0.43
DDX41-212ENST00000511040 AP3M1Q9Y2T2 418 aa12.36□□□□□ -0.43
DDX41-212ENST00000511040 GPR52Q9Y2T5 361 aa12.36□□□□□ -0.43
DDX41-212ENST00000511040 LRBAP50851 2863 aa12.35□□□□□ -0.43
DDX41-212ENST00000511040 A0A1W2PPR1 153 aa12.35□□□□□ -0.43
DDX41-212ENST00000511040 TRAPPC13A5PLN9 417 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms