RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 PDK3Q15120 406 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 OR7A5Q15622 319 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 MAPK14Q16539 360 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 OCLNQ16625 522 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 ZSWIM7Q19AV6 140 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 LSM12Q3MHD2 195 aaKnown RBP4.99□□□□□ -1.61
GYPB-208ENST00000507009 FAM153CQ494X1 144 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 ATP6AP1LQ52LC2 224 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 GPAT3Q53EU6 434 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 EXOSC6Q5RKV6 272 aaKnown RBP4.99□□□□□ -1.61
GYPB-208ENST00000507009 TMEM225Q6GV28 225 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 KRT80Q6KB66 452 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 NIPAL3Q6P499 406 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 TNFAIP8L2Q6P589 184 aaPredicted RBP4.99□□□□□ -1.61
GYPB-208ENST00000507009 ANKRD16Q6P6B7 361 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 DEF8Q6ZN54 512 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 TIFABQ6ZNK6 161 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 GRINAQ7Z429 371 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 C6orf120Q7Z4R8 191 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 ABHD12BQ7Z5M8 362 aaPredicted RBP4.99□□□□□ -1.61
GYPB-208ENST00000507009 CARM1Q86X55 608 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 ADGRG3Q86Y34 549 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 CDK20Q8IZL9 346 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 CLECL1Q8IZS7 167 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 KRTCAP2Q8N6L1 136 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 TMEM99Q8N816 258 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 C1orf162Q8NEQ5 155 aaPredicted RBP4.99□□□□□ -1.61
GYPB-208ENST00000507009 OR9K2Q8NGE7 335 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 OR1K1Q8NGR3 316 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 CLDND2Q8NHS1 167 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 CKAP2Q8WWK9 683 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 XAGE5Q8WWM1 108 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 NEU4Q8WWR8 484 aaPredicted RBP4.99□□□□□ -1.61
GYPB-208ENST00000507009 RAB8BQ92930 207 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 DDIT4LQ96D03 193 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 MTERF3Q96E29 417 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 ZNF385AQ96PM9 386 aaKnown RBP4.99□□□□□ -1.61
GYPB-208ENST00000507009 KATNB1Q9BVA0 655 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 CCDC106Q9BWC9 280 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 FUT8Q9BYC5 575 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 KRTAP9-2Q9BYQ4 174 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 OR51I1Q9H343 314 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 PLK3Q9H4B4 646 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 TUBB1Q9H4B7 451 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 SERHL2Q9H4I8 314 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 EXD2Q9NVH0 621 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 ATAD3AQ9NVI7 634 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 TMEM45AQ9NWC5 275 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 ADPRHL2Q9NX46 363 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 DCDC2Q9UHG0 476 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 ATP6V1HQ9UI12 483 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 PCDHB10Q9UN67 800 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 TMED7Q9Y3B3 224 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 GRIP1Q9Y3R0 1128 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 WDR45Q9Y484 360 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 PCDHGB1Q9Y5G3 927 aa4.99□□□□□ -1.61
GYPB-208ENST00000507009 NUP214P35658 2090 aaPredicted RBP4.98□□□□□ -1.61
GYPB-208ENST00000507009 A0A0A6YYJ9 748 aa4.98□□□□□ -1.61
GYPB-208ENST00000507009 TMEM89A2RUT3 159 aa4.98□□□□□ -1.61
GYPB-208ENST00000507009 SLCO1B7G3V0H7 640 aa4.98□□□□□ -1.61
GYPB-208ENST00000507009 H3BQF6 201 aa4.98□□□□□ -1.61
GYPB-208ENST00000507009 WNT9BO14905 357 aa4.98□□□□□ -1.61
GYPB-208ENST00000507009 ANKRD28O15084 1053 aa4.98□□□□□ -1.61
GYPB-208ENST00000507009 PPIHO43447 177 aaKnown RBP4.98□□□□□ -1.61
GYPB-208ENST00000507009 DNPH1O43598 174 aa4.98□□□□□ -1.61
GYPB-208ENST00000507009 EIF1BO60739 113 aaKnown RBP4.98□□□□□ -1.61
GYPB-208ENST00000507009 SEC14L2O76054 403 aa4.98□□□□□ -1.61
GYPB-208ENST00000507009 URI1O94763 535 aaPredicted RBP4.98□□□□□ -1.61
GYPB-208ENST00000507009 CPSF4O95639 269 aaKnown RBP4.98□□□□□ -1.61
GYPB-208ENST00000507009 CHRNGP07510 517 aa4.98□□□□□ -1.61
GYPB-208ENST00000507009 MSMBP08118 114 aa4.98□□□□□ -1.61
GYPB-208ENST00000507009 SAGP10523 405 aaPredicted RBP4.98□□□□□ -1.61
GYPB-208ENST00000507009 PRPH2P23942 346 aa4.98□□□□□ -1.61
GYPB-208ENST00000507009 GIFP27352 417 aa4.98□□□□□ -1.61
GYPB-208ENST00000507009 MAPK1P28482 360 aa4.98□□□□□ -1.61
GYPB-208ENST00000507009 TACR3P29371 465 aa4.98□□□□□ -1.61
GYPB-208ENST00000507009 PGM1P36871 562 aa4.98□□□□□ -1.61
GYPB-208ENST00000507009 RPL3P39023 403 aaKnown RBP4.98□□□□□ -1.61
GYPB-208ENST00000507009 SELENOPP49908 381 aa4.98□□□□□ -1.61
GYPB-208ENST00000507009 POLR2HP52434 150 aaKnown RBP4.98□□□□□ -1.61
GYPB-208ENST00000507009 SLC16A1P53985 500 aa4.98□□□□□ -1.61
GYPB-208ENST00000507009 HBA1P69905 142 aa4.98□□□□□ -1.61
GYPB-208ENST00000507009 HPCAP84074 193 aa4.98□□□□□ -1.61
GYPB-208ENST00000507009 ROR2Q01974 943 aaKnown RBP4.98□□□□□ -1.61
GYPB-208ENST00000507009 HGFACQ04756 655 aa4.98□□□□□ -1.61
GYPB-208ENST00000507009 BNIP2Q12982 314 aa4.98□□□□□ -1.61
GYPB-208ENST00000507009 SCGB2A2Q13296 93 aa4.98□□□□□ -1.61
GYPB-208ENST00000507009 SNTB2Q13425 540 aaKnown RBP4.98□□□□□ -1.61
GYPB-208ENST00000507009 DAG1Q14118 895 aa4.98□□□□□ -1.61
GYPB-208ENST00000507009 MAD2L1BPQ15013 274 aaPredicted RBP4.98□□□□□ -1.61
GYPB-208ENST00000507009 EFNB3Q15768 340 aa4.98□□□□□ -1.61
GYPB-208ENST00000507009 ZNF141Q15928 474 aa4.98□□□□□ -1.61
GYPB-208ENST00000507009 ALKBH6Q3KRA9 238 aa4.98□□□□□ -1.61
GYPB-208ENST00000507009 ARHGAP11BQ3KRB8 267 aa4.98□□□□□ -1.61
GYPB-208ENST00000507009 PDLIM3Q53GG5 364 aaPredicted RBP4.98□□□□□ -1.61
GYPB-208ENST00000507009 AWAT1Q58HT5 328 aa4.98□□□□□ -1.61
GYPB-208ENST00000507009 ZNF311Q5JNZ3 666 aa4.98□□□□□ -1.61
GYPB-208ENST00000507009 ATAD3BQ5T9A4 648 aa4.98□□□□□ -1.61
GYPB-208ENST00000507009 IL23RQ5VWK5 629 aa4.98□□□□□ -1.61
GYPB-208ENST00000507009 EMBQ6PCB8 327 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms