RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 CHID1Q9BWS9 393 aa11.48□□□□□ -0.57
TCOF1-210ENST00000506767 TENM4Q6N022 2769 aa11.48□□□□□ -0.57
TCOF1-210ENST00000506767 NBASA2RRP1 2371 aa11.47□□□□□ -0.57
TCOF1-210ENST00000506767 A0A087WUU8 490 aa11.47□□□□□ -0.57
TCOF1-210ENST00000506767 IGHV3-15A0A0B4J1V0 119 aa11.47□□□□□ -0.57
TCOF1-210ENST00000506767 A0A0G2JNJ9 132 aa11.47□□□□□ -0.57
TCOF1-210ENST00000506767 HTR3EA5X5Y0 456 aa11.47□□□□□ -0.57
TCOF1-210ENST00000506767 WIPF3A6NGB9 483 aa11.47□□□□□ -0.57
TCOF1-210ENST00000506767 ZNF814B7Z6K7 855 aa11.47□□□□□ -0.57
TCOF1-210ENST00000506767 EIF1BO60739 113 aaKnown RBP11.47□□□□□ -0.57
TCOF1-210ENST00000506767 CYTIPO60759 359 aa11.47□□□□□ -0.57
TCOF1-210ENST00000506767 IL2RAP01589 272 aa11.47□□□□□ -0.57
TCOF1-210ENST00000506767 FCGR2AP12318 317 aa11.47□□□□□ -0.57
TCOF1-210ENST00000506767 KLK2P20151 261 aa11.47□□□□□ -0.57
TCOF1-210ENST00000506767 RRM2P31350 389 aa11.47□□□□□ -0.57
TCOF1-210ENST00000506767 LIMS1P48059 325 aa11.47□□□□□ -0.57
TCOF1-210ENST00000506767 ERFP50548 548 aa11.47□□□□□ -0.57
TCOF1-210ENST00000506767 P2RY4P51582 365 aa11.47□□□□□ -0.57
TCOF1-210ENST00000506767 CTBP2P56545 445 aa11.47□□□□□ -0.57
TCOF1-210ENST00000506767 SMIM11AP58511 58 aa11.47□□□□□ -0.57
TCOF1-210ENST00000506767 LSM11P83369 360 aaKnown RBP eCLIP11.47□□□□□ -0.57
TCOF1-210ENST00000506767 GUSBP1Q15486 140 aa11.47□□□□□ -0.57
TCOF1-210ENST00000506767 ZNF74Q16587 644 aa11.47□□□□□ -0.57
TCOF1-210ENST00000506767 ABLIM2Q6H8Q1 611 aa11.47□□□□□ -0.57
TCOF1-210ENST00000506767 OR2A2Q6IF42 318 aa11.47□□□□□ -0.57
TCOF1-210ENST00000506767 PAQR6Q6TCH4 344 aa11.47□□□□□ -0.57
TCOF1-210ENST00000506767 FCRLAQ7L513 359 aa11.47□□□□□ -0.57
TCOF1-210ENST00000506767 SLC43A2Q8N370 569 aa11.47□□□□□ -0.57
TCOF1-210ENST00000506767 NAXEQ8NCW5 288 aa11.47□□□□□ -0.57
TCOF1-210ENST00000506767 PFN4Q8NHR9 129 aa11.47□□□□□ -0.57
TCOF1-210ENST00000506767 LIPHQ8WWY8 451 aa11.47□□□□□ -0.57
TCOF1-210ENST00000506767 RND1Q92730 232 aa11.47□□□□□ -0.57
TCOF1-210ENST00000506767 ZHX1-C8orf76Q96EF9 292 aa11.47□□□□□ -0.57
TCOF1-210ENST00000506767 ZFP3Q96NJ6 502 aa11.47□□□□□ -0.57
TCOF1-210ENST00000506767 MOGAT1Q96PD6 335 aa11.47□□□□□ -0.57
TCOF1-210ENST00000506767 NAA11Q9BSU3 229 aaPredicted RBP11.47□□□□□ -0.57
TCOF1-210ENST00000506767 TAPBPLQ9BX59 468 aa11.47□□□□□ -0.57
TCOF1-210ENST00000506767 C20orf141Q9NUB4 165 aa11.47□□□□□ -0.57
TCOF1-210ENST00000506767 Q9UFV3 132 aa11.47□□□□□ -0.57
TCOF1-210ENST00000506767 ING1Q9UK53 422 aaPredicted RBP11.47□□□□□ -0.57
TCOF1-210ENST00000506767 AURKCQ9UQB9 309 aa11.47□□□□□ -0.57
TCOF1-210ENST00000506767 MED31Q9Y3C7 131 aa11.47□□□□□ -0.57
TCOF1-210ENST00000506767 TESMINQ9Y4I5 508 aa11.47□□□□□ -0.57
TCOF1-210ENST00000506767 DOCK7Q96N67 2140 aa11.47□□□□□ -0.57
TCOF1-210ENST00000506767 RELNP78509 3460 aa11.47□□□□□ -0.57
TCOF1-210ENST00000506767 NCOA6Q14686 2063 aaPredicted RBP11.47□□□□□ -0.57
TCOF1-210ENST00000506767 ASH1LQ9NR48 2969 aaKnown RBP11.46□□□□□ -0.57
TCOF1-210ENST00000506767 AQP7P3A6NL99 342 aa11.46□□□□□ -0.57
TCOF1-210ENST00000506767 HSPB2A8KAH6 182 aa11.46□□□□□ -0.57
TCOF1-210ENST00000506767 FKBP6O75344 327 aa11.46□□□□□ -0.57
TCOF1-210ENST00000506767 KRT36O76013 467 aa11.46□□□□□ -0.57
TCOF1-210ENST00000506767 AKR7A3O95154 331 aa11.46□□□□□ -0.57
TCOF1-210ENST00000506767 GADD45GO95257 159 aa11.46□□□□□ -0.57
TCOF1-210ENST00000506767 MT-ATP6P00846 226 aa11.46□□□□□ -0.57
TCOF1-210ENST00000506767 CRHP06850 196 aa11.46□□□□□ -0.57
TCOF1-210ENST00000506767 SPIBQ01892 262 aa11.46□□□□□ -0.57
TCOF1-210ENST00000506767 PRKCDQ05655 676 aa11.46□□□□□ -0.57
TCOF1-210ENST00000506767 FOXD4Q12950 439 aaPredicted RBP11.46□□□□□ -0.57
TCOF1-210ENST00000506767 KPNB1Q14974 876 aaKnown RBP11.46□□□□□ -0.57
TCOF1-210ENST00000506767 MFSD13AQ14CX5 517 aa11.46□□□□□ -0.57
TCOF1-210ENST00000506767 PDK3Q15120 406 aa11.46□□□□□ -0.57
TCOF1-210ENST00000506767 RNPS1Q15287 305 aaKnown RBP11.46□□□□□ -0.57
TCOF1-210ENST00000506767 HSPB2Q16082 182 aa11.46□□□□□ -0.57
TCOF1-210ENST00000506767 GTF2IRD2BQ6EKJ0 949 aa11.46□□□□□ -0.57
TCOF1-210ENST00000506767 OR2T5Q6IEZ7 315 aa11.46□□□□□ -0.57
TCOF1-210ENST00000506767 PODNL1Q6PEZ8 512 aa11.46□□□□□ -0.57
TCOF1-210ENST00000506767 TBPL2Q6SJ96 375 aa11.46□□□□□ -0.57
TCOF1-210ENST00000506767 MBOAT2Q6ZWT7 520 aa11.46□□□□□ -0.57
TCOF1-210ENST00000506767 SLC46A3Q7Z3Q1 461 aa11.46□□□□□ -0.57
TCOF1-210ENST00000506767 P4HA3Q7Z4N8 544 aa11.46□□□□□ -0.57
TCOF1-210ENST00000506767 GTF2IRD2Q86UP8 949 aa11.46□□□□□ -0.57
TCOF1-210ENST00000506767 CCDC103Q8IW40 242 aa11.46□□□□□ -0.57
TCOF1-210ENST00000506767 TMEM99Q8N816 258 aa11.46□□□□□ -0.57
TCOF1-210ENST00000506767 OR2T29Q8NH02 315 aa11.46□□□□□ -0.57
TCOF1-210ENST00000506767 OR52J3Q8NH60 311 aa11.46□□□□□ -0.57
TCOF1-210ENST00000506767 SLC25A36Q96CQ1 311 aa11.46□□□□□ -0.57
TCOF1-210ENST00000506767 PSD2Q9BQI7 771 aa11.46□□□□□ -0.57
TCOF1-210ENST00000506767 PRRG4Q9BZD6 226 aa11.46□□□□□ -0.57
TCOF1-210ENST00000506767 KLHL4Q9C0H6 718 aa11.46□□□□□ -0.57
TCOF1-210ENST00000506767 GP6Q9HCN6 339 aa11.46□□□□□ -0.57
TCOF1-210ENST00000506767 GLRX2Q9NS18 164 aa11.46□□□□□ -0.57
TCOF1-210ENST00000506767 ARMC1Q9NVT9 282 aa11.46□□□□□ -0.57
TCOF1-210ENST00000506767 RNF6Q9Y252 685 aa11.46□□□□□ -0.57
TCOF1-210ENST00000506767 CORINQ9Y5Q5 1042 aa11.46□□□□□ -0.57
TCOF1-210ENST00000506767 LYVE1Q9Y5Y7 322 aa11.46□□□□□ -0.57
TCOF1-210ENST00000506767 MED12LQ86YW9 2145 aa11.45□□□□□ -0.58
TCOF1-210ENST00000506767 TRBV4-1A0A0J9YWV2 114 aa11.45□□□□□ -0.58
TCOF1-210ENST00000506767 SH3PXD2BA1X283 911 aa11.45□□□□□ -0.58
TCOF1-210ENST00000506767 ENO4A6NNW6 628 aa11.45□□□□□ -0.58
TCOF1-210ENST00000506767 ZNF716A6NP11 495 aa11.45□□□□□ -0.58
TCOF1-210ENST00000506767 LRRN3E7EW58 273 aa11.45□□□□□ -0.58
TCOF1-210ENST00000506767 KPNA4O00629 521 aaPredicted RBP11.45□□□□□ -0.58
TCOF1-210ENST00000506767 PIP5K1CO60331 668 aa11.45□□□□□ -0.58
TCOF1-210ENST00000506767 RAMP1O60894 148 aa11.45□□□□□ -0.58
TCOF1-210ENST00000506767 CH25HO95992 272 aa11.45□□□□□ -0.58
TCOF1-210ENST00000506767 LDLRP01130 860 aa11.45□□□□□ -0.58
TCOF1-210ENST00000506767 ASAH2BP0C7U1 165 aa11.45□□□□□ -0.58
TCOF1-210ENST00000506767 GRPRP30550 384 aa11.45□□□□□ -0.58
TCOF1-210ENST00000506767 SLC16A1P53985 500 aa11.45□□□□□ -0.58
TCOF1-210ENST00000506767 PER3P56645 1201 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms