RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 A0A1W2PQ45 241 aaPredicted RBP5.68□□□□□ -1.5
LINC02397-201ENST00000504409 A0A1W2PQY0 241 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 ZNF814B7Z6K7 855 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 NTSR2O95665 410 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 SCGB1A1P11684 91 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 RPL13AP40429 203 aaKnown RBP5.68□□□□□ -1.5
LINC02397-201ENST00000504409 ACTR1BP42025 376 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 FAM180AQ6UWF9 173 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 OR2G2Q8NGZ5 317 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 SYNPRQ8TBG9 265 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 PTX4Q96A99 478 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 UBXN10Q96LJ8 280 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 SLC46A1Q96NT5 459 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 SORBS1Q9BX66 1292 aaKnown RBP5.68□□□□□ -1.5
LINC02397-201ENST00000504409 HDAC8Q9BY41 377 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 MIOXQ9UGB7 285 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 PCTPQ9UKL6 214 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 LTBP4Q8N2S1 1624 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 EDN1P05305 212 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 AKR1C4P17516 323 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 ELOCQ15369 112 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 ELOBQ15370 118 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 PAGE3Q5JUK9 113 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 NRSN1Q8IZ57 195 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 OR4K13Q8NH42 304 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 OR5B3Q8NH48 314 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 MFSD3Q96ES6 412 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 TMEM70Q9BUB7 260 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 RIMS4Q9H426 269 aaPredicted RBP5.68□□□□□ -1.5
LINC02397-201ENST00000504409 SERINC1Q9NRX5 453 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 COPS7AQ9UBW8 275 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 DDX60LQ5H9U9 1706 aaKnown RBP5.68□□□□□ -1.5
LINC02397-201ENST00000504409 TBC1D3KA0A087X1G2 549 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 TBC1D3BA6NDS4 549 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 TBC1D3FA6NER0 549 aaPredicted RBP5.68□□□□□ -1.5
LINC02397-201ENST00000504409 H7BYZ3 331 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 HKR1P10072 659 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 GPX2P18283 190 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 NMBRP28336 390 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 GAGE1Q13065 139 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 TBC1D3GQ6DHY5 549 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 USP50Q70EL3 339 aaPredicted RBP5.68□□□□□ -1.5
LINC02397-201ENST00000504409 C11orf96Q7Z7L8 435 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 EXD3Q8N9H8 876 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 RAB37Q96AX2 223 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 C5orf34Q96MH7 638 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 ARV1Q9H2C2 271 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 SLC35A3Q9Y2D2 325 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 A0A087WWC5 75 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 SMIM35A0A1B0GVV1 85 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 TCRBV7S2A1N4TA0A589 114 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 SIRPB1O00241 398 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 NSA2O95478 260 aaKnown RBP5.68□□□□□ -1.5
LINC02397-201ENST00000504409 RPL29P47914 159 aaKnown RBP5.68□□□□□ -1.5
LINC02397-201ENST00000504409 GPR17Q13304 367 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 SCARF1Q14162 830 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 MIDNQ504T8 468 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 TMEM201Q5SNT2 666 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 C9orf57Q5W0N0 161 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 PRR27Q6MZM9 219 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 APOBEC3HQ6NTF7 200 aaKnown RBP5.68□□□□□ -1.5
LINC02397-201ENST00000504409 CA5BP1Q8WTZ4 195 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 ATOH1Q92858 354 aaPredicted RBP5.68□□□□□ -1.5
LINC02397-201ENST00000504409 MRPL24Q96A35 216 aaKnown RBP5.68□□□□□ -1.5
LINC02397-201ENST00000504409 MIB2Q96AX9 1013 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 FERD3LQ96RJ6 166 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 GPR88Q9GZN0 384 aa5.68□□□□□ -1.5
LINC02397-201ENST00000504409 OR5H14A6NHG9 310 aa5.67□□□□□ -1.5
LINC02397-201ENST00000504409 A8MU76 341 aa5.67□□□□□ -1.5
LINC02397-201ENST00000504409 CTDSP2O14595 271 aa5.67□□□□□ -1.5
LINC02397-201ENST00000504409 SLC25A14O95258 325 aaPredicted RBP5.67□□□□□ -1.5
LINC02397-201ENST00000504409 GP1BAP07359 652 aa5.67□□□□□ -1.5
LINC02397-201ENST00000504409 LIMS3P0CW19 117 aa5.67□□□□□ -1.5
LINC02397-201ENST00000504409 LIMS4P0CW20 117 aa5.67□□□□□ -1.5
LINC02397-201ENST00000504409 TXNP10599 105 aaKnown RBP5.67□□□□□ -1.5
LINC02397-201ENST00000504409 CBLP22681 906 aa5.67□□□□□ -1.5
LINC02397-201ENST00000504409 DUSP1P28562 367 aa5.67□□□□□ -1.5
LINC02397-201ENST00000504409 CAV2P51636 162 aa5.67□□□□□ -1.5
LINC02397-201ENST00000504409 EGR3Q06889 387 aa5.67□□□□□ -1.5
LINC02397-201ENST00000504409 OR52J3Q8NH60 311 aa5.67□□□□□ -1.5
LINC02397-201ENST00000504409 FBLIM1Q8WUP2 373 aa5.67□□□□□ -1.5
LINC02397-201ENST00000504409 TMIGD2Q96BF3 282 aa5.67□□□□□ -1.5
LINC02397-201ENST00000504409 PARK7Q99497 189 aaKnown RBP5.67□□□□□ -1.5
LINC02397-201ENST00000504409 P2RX4Q99571 388 aa5.67□□□□□ -1.5
LINC02397-201ENST00000504409 OSMRQ99650 979 aa5.67□□□□□ -1.5
LINC02397-201ENST00000504409 PDCD2LQ9BRP1 358 aa5.67□□□□□ -1.5
LINC02397-201ENST00000504409 CABLES2Q9BTV7 478 aa5.67□□□□□ -1.5
LINC02397-201ENST00000504409 PRR14Q9BWN1 585 aa5.67□□□□□ -1.5
LINC02397-201ENST00000504409 SLC17A9Q9BYT1 436 aa5.67□□□□□ -1.5
LINC02397-201ENST00000504409 NMNAT2Q9BZQ4 307 aa5.67□□□□□ -1.5
LINC02397-201ENST00000504409 PIM2Q9P1W9 311 aa5.67□□□□□ -1.5
LINC02397-201ENST00000504409 TP53TG5Q9Y2B4 290 aa5.67□□□□□ -1.5
LINC02397-201ENST00000504409 CARHSP1Q9Y2V2 147 aaKnown RBP5.67□□□□□ -1.5
LINC02397-201ENST00000504409 CELF2O95319 508 aaKnown RBP5.67□□□□□ -1.5
LINC02397-201ENST00000504409 MT-ND4P03905 459 aa5.67□□□□□ -1.5
LINC02397-201ENST00000504409 PRNPP04156 253 aa5.67□□□□□ -1.5
LINC02397-201ENST00000504409 HLA-DOBP13765 273 aa5.67□□□□□ -1.5
LINC02397-201ENST00000504409 CRHR2Q13324 411 aa5.67□□□□□ -1.5
LINC02397-201ENST00000504409 IL10RAQ13651 578 aa5.67□□□□□ -1.5
LINC02397-201ENST00000504409 INAVAQ3KP66 663 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms