RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 TRMT2BQ96GJ1 504 aaKnown RBP15.99■□□□□ 0.15
HMGXB3-201ENST00000502717 C19orf25Q9UFG5 118 aaPredicted RBP15.99■□□□□ 0.15
HMGXB3-201ENST00000502717 SERTAD3Q9UJW9 196 aa15.99■□□□□ 0.15
HMGXB3-201ENST00000502717 CHST2Q9Y4C5 530 aa15.99■□□□□ 0.15
HMGXB3-201ENST00000502717 KLKB1P03952 638 aa15.99■□□□□ 0.15
HMGXB3-201ENST00000502717 ACSM4P0C7M7 580 aa15.99■□□□□ 0.15
HMGXB3-201ENST00000502717 CTSAP10619 480 aa15.99■□□□□ 0.15
HMGXB3-201ENST00000502717 TNK1Q13470 666 aa15.99■□□□□ 0.15
HMGXB3-201ENST00000502717 AKR1C8PQ5T2L2 129 aa15.99■□□□□ 0.15
HMGXB3-201ENST00000502717 CD163Q86VB7 1156 aa15.99■□□□□ 0.15
HMGXB3-201ENST00000502717 TMEM200AQ86VY9 491 aa15.99■□□□□ 0.15
HMGXB3-201ENST00000502717 SCN9AQ15858 1988 aa15.99■□□□□ 0.15
HMGXB3-201ENST00000502717 COL4A1P02462 1669 aa15.99■□□□□ 0.15
HMGXB3-201ENST00000502717 TCRBV21S2A2A0A5A6 115 aa15.99■□□□□ 0.15
HMGXB3-201ENST00000502717 FAM221BA6H8Z2 402 aa15.99■□□□□ 0.15
HMGXB3-201ENST00000502717 LEUTXA8MZ59 168 aa15.99■□□□□ 0.15
HMGXB3-201ENST00000502717 ZNF674Q2M3X9 581 aa15.99■□□□□ 0.15
HMGXB3-201ENST00000502717 MAMDC2Q7Z304 686 aaPredicted RBP15.99■□□□□ 0.15
HMGXB3-201ENST00000502717 TMEM255BQ8WV15 326 aa15.99■□□□□ 0.15
HMGXB3-201ENST00000502717 SLC25A44Q96H78 314 aaPredicted RBP15.99■□□□□ 0.15
HMGXB3-201ENST00000502717 FBRSQ9HAH7 460 aa15.99■□□□□ 0.15
HMGXB3-201ENST00000502717 HCCSP53701 268 aa15.98■□□□□ 0.15
HMGXB3-201ENST00000502717 FAM26DQ5JW98 314 aa15.98■□□□□ 0.15
HMGXB3-201ENST00000502717 ST8SIA2Q92186 375 aa15.98■□□□□ 0.15
HMGXB3-201ENST00000502717 SEC22AQ96IW7 307 aa15.98■□□□□ 0.15
HMGXB3-201ENST00000502717 SULT4A1Q9BR01 284 aa15.98■□□□□ 0.15
HMGXB3-201ENST00000502717 CCDC86Q9H6F5 360 aaKnown RBP15.98■□□□□ 0.15
HMGXB3-201ENST00000502717 IFT22Q9H7X7 185 aa15.98■□□□□ 0.15
HMGXB3-201ENST00000502717 ZNF337Q9Y3M9 751 aa15.98■□□□□ 0.15
HMGXB3-201ENST00000502717 SHROOM3Q8TF72 1996 aa15.98■□□□□ 0.15
HMGXB3-201ENST00000502717 PGFP49763 221 aa15.98■□□□□ 0.15
HMGXB3-201ENST00000502717 NNATQ16517 81 aa15.98■□□□□ 0.15
HMGXB3-201ENST00000502717 TEAD3Q99594 435 aa15.98■□□□□ 0.15
HMGXB3-201ENST00000502717 NUDT19A8MXV4 375 aa15.98■□□□□ 0.15
HMGXB3-201ENST00000502717 TSTD3H0UI37 97 aa15.98■□□□□ 0.15
HMGXB3-201ENST00000502717 MED6O75586 246 aa15.98■□□□□ 0.15
HMGXB3-201ENST00000502717 RGS11O94810 467 aa15.98■□□□□ 0.15
HMGXB3-201ENST00000502717 SBK2P0C263 348 aa15.98■□□□□ 0.15
HMGXB3-201ENST00000502717 KIAA0040Q15053 153 aa15.98■□□□□ 0.15
HMGXB3-201ENST00000502717 MRPL2Q5T653 305 aaKnown RBP15.98■□□□□ 0.15
HMGXB3-201ENST00000502717 H3F3CQ6NXT2 135 aa15.98■□□□□ 0.15
HMGXB3-201ENST00000502717 JSRP1Q96MG2 331 aaPredicted RBP15.98■□□□□ 0.15
HMGXB3-201ENST00000502717 SLCO5A1Q9H2Y9 848 aa15.98■□□□□ 0.15
HMGXB3-201ENST00000502717 NPIPA5A0A0B4J1W7 369 aa15.98■□□□□ 0.15
HMGXB3-201ENST00000502717 OR6C65A6NJZ3 312 aa15.98■□□□□ 0.15
HMGXB3-201ENST00000502717 NPIPA7E9PJI5 369 aa15.98■□□□□ 0.15
HMGXB3-201ENST00000502717 HMGN4O00479 90 aa15.98■□□□□ 0.15
HMGXB3-201ENST00000502717 NPIPA8P0DM63 369 aa15.98■□□□□ 0.15
HMGXB3-201ENST00000502717 EIF2S3P41091 472 aaKnown RBP15.98■□□□□ 0.15
HMGXB3-201ENST00000502717 EPHA5P54756 1037 aa15.98■□□□□ 0.15
HMGXB3-201ENST00000502717 RAG2P55895 527 aa15.98■□□□□ 0.15
HMGXB3-201ENST00000502717 AWAT2Q6E213 333 aa15.98■□□□□ 0.15
HMGXB3-201ENST00000502717 C12orf40Q86WS4 652 aa15.98■□□□□ 0.15
HMGXB3-201ENST00000502717 SLC43A2Q8N370 569 aa15.98■□□□□ 0.15
HMGXB3-201ENST00000502717 NLGN4YQ8NFZ3 816 aaPredicted RBP15.98■□□□□ 0.15
HMGXB3-201ENST00000502717 FAM3CQ92520 227 aa15.98■□□□□ 0.15
HMGXB3-201ENST00000502717 C12orf57Q99622 126 aa15.98■□□□□ 0.15
HMGXB3-201ENST00000502717 HRASLSQ9HDD0 168 aa15.98■□□□□ 0.15
HMGXB3-201ENST00000502717 HINT3Q9NQE9 182 aaKnown RBP15.98■□□□□ 0.15
HMGXB3-201ENST00000502717 PRELID3BQ9Y3B1 194 aa15.98■□□□□ 0.15
HMGXB3-201ENST00000502717 V9GYH0 126 aa15.98■□□□□ 0.15
HMGXB3-201ENST00000502717 ATAD5Q96QE3 1844 aa15.97■□□□□ 0.15
HMGXB3-201ENST00000502717 BDKRB2P30411 391 aa15.97■□□□□ 0.15
HMGXB3-201ENST00000502717 PLGLB1Q02325 96 aa15.97■□□□□ 0.15
HMGXB3-201ENST00000502717 DSC1Q08554 894 aa15.97■□□□□ 0.15
HMGXB3-201ENST00000502717 CCNJQ5T5M9 372 aa15.97■□□□□ 0.15
HMGXB3-201ENST00000502717 TMEM234Q8WY98 164 aa15.97■□□□□ 0.15
HMGXB3-201ENST00000502717 IGLON5A6NGN9 336 aa15.97■□□□□ 0.15
HMGXB3-201ENST00000502717 RNH1P13489 461 aaKnown RBP15.97■□□□□ 0.15
HMGXB3-201ENST00000502717 TUBG1P23258 451 aa15.97■□□□□ 0.15
HMGXB3-201ENST00000502717 RUNX3Q13761 415 aa15.97■□□□□ 0.15
HMGXB3-201ENST00000502717 ZNF283Q8N7M2 679 aa15.97■□□□□ 0.15
HMGXB3-201ENST00000502717 C19orf43Q9BQ61 176 aa15.97■□□□□ 0.15
HMGXB3-201ENST00000502717 ZNF629Q9UEG4 869 aaPredicted RBP15.97■□□□□ 0.15
HMGXB3-201ENST00000502717 CBLCQ9ULV8 474 aa15.97■□□□□ 0.15
HMGXB3-201ENST00000502717 HIF3AQ9Y2N7 669 aa15.97■□□□□ 0.15
HMGXB3-201ENST00000502717 E9PI62 339 aa15.97■□□□□ 0.15
HMGXB3-201ENST00000502717 OR2F2O95006 317 aa15.97■□□□□ 0.15
HMGXB3-201ENST00000502717 EN2P19622 333 aaPredicted RBP15.97■□□□□ 0.15
HMGXB3-201ENST00000502717 RAB6AP20340 208 aa15.97■□□□□ 0.15
HMGXB3-201ENST00000502717 MAOBP27338 520 aa15.97■□□□□ 0.15
HMGXB3-201ENST00000502717 SOX18P35713 384 aa15.97■□□□□ 0.15
HMGXB3-201ENST00000502717 RAD52P43351 418 aa15.97■□□□□ 0.15
HMGXB3-201ENST00000502717 PRDX1Q06830 199 aaKnown RBP15.97■□□□□ 0.15
HMGXB3-201ENST00000502717 OR2F1Q13607 317 aa15.97■□□□□ 0.15
HMGXB3-201ENST00000502717 MYEF2Q9P2K5 600 aaKnown RBP15.97■□□□□ 0.15
HMGXB3-201ENST00000502717 NDRG3Q9UGV2 375 aa15.97■□□□□ 0.15
HMGXB3-201ENST00000502717 HS3ST2Q9Y278 367 aa15.97■□□□□ 0.15
HMGXB3-201ENST00000502717 RAB19A4D1S5 217 aa15.97■□□□□ 0.15
HMGXB3-201ENST00000502717 TGM5O43548 720 aa15.97■□□□□ 0.15
HMGXB3-201ENST00000502717 AIFM1O95831 613 aa15.97■□□□□ 0.15
HMGXB3-201ENST00000502717 CALCBP10092 127 aa15.97■□□□□ 0.15
HMGXB3-201ENST00000502717 MMP15P51511 669 aa15.97■□□□□ 0.15
HMGXB3-201ENST00000502717 SHC2P98077 582 aa15.97■□□□□ 0.15
HMGXB3-201ENST00000502717 SCGB1C1Q8TD33 95 aa15.97■□□□□ 0.15
HMGXB3-201ENST00000502717 SLC5A7Q9GZV3 580 aa15.97■□□□□ 0.15
HMGXB3-201ENST00000502717 IL21RQ9HBE5 538 aa15.97■□□□□ 0.15
HMGXB3-201ENST00000502717 CXXC1Q9P0U4 656 aaPredicted RBP15.97■□□□□ 0.15
HMGXB3-201ENST00000502717 TRBV5-4A0A0C4DH59 114 aa15.96■□□□□ 0.15
HMGXB3-201ENST00000502717 SLC22A23A1A5C7 686 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms